RNA–Protein interactions for RNA: ENST00000481048.5

LRCH3-216, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 536 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-216ENST00000481048 GUCA2AQ02747 115 aa10.54□□□□□ -0.72
LRCH3-216ENST00000481048 SNIP1Q8TAD8 396 aaKnown RBP10.54□□□□□ -0.72
LRCH3-216ENST00000481048 ATP1B4Q9UN42 357 aaPredicted RBP10.54□□□□□ -0.72
LRCH3-216ENST00000481048 SCAPERQ9BY12 1400 aa10.53□□□□□ -0.72
LRCH3-216ENST00000481048 KRI1Q8N9T8 703 aaKnown RBP10.53□□□□□ -0.72
LRCH3-216ENST00000481048 MRGPRX2Q96LB1 330 aa10.53□□□□□ -0.72
LRCH3-216ENST00000481048 FAM217BQ9NTX9 383 aaPredicted RBP10.53□□□□□ -0.72
LRCH3-216ENST00000481048 GMPR2Q9P2T1 348 aaKnown RBP10.53□□□□□ -0.72
LRCH3-216ENST00000481048 ZFYVE16Q7Z3T8 1539 aa10.53□□□□□ -0.72
LRCH3-216ENST00000481048 MADDQ8WXG6 1647 aa10.52□□□□□ -0.73
LRCH3-216ENST00000481048 SMPD1P17405 629 aa10.52□□□□□ -0.73
LRCH3-216ENST00000481048 SMCPP49901 116 aaPredicted RBP10.52□□□□□ -0.73
LRCH3-216ENST00000481048 CLIP1P30622 1438 aa10.51□□□□□ -0.73
LRCH3-216ENST00000481048 TROQ12816 1431 aaPredicted RBP10.51□□□□□ -0.73
LRCH3-216ENST00000481048 NUTM1Q86Y26 1132 aa10.51□□□□□ -0.73
LRCH3-216ENST00000481048 SYMPKQ92797 1274 aaKnown RBP10.51□□□□□ -0.73
LRCH3-216ENST00000481048 KIF14Q15058 1648 aa10.51□□□□□ -0.73
LRCH3-216ENST00000481048 RIMS1Q86UR5 1692 aaKnown RBP10.5□□□□□ -0.73
LRCH3-216ENST00000481048 C11orf95C9JLR9 678 aaPredicted RBP10.5□□□□□ -0.73
LRCH3-216ENST00000481048 ATP10AO60312 1499 aa10.49□□□□□ -0.73
LRCH3-216ENST00000481048 PCF11O94913 1555 aaKnown RBP10.49□□□□□ -0.73
LRCH3-216ENST00000481048 J3QL48 77 aa10.49□□□□□ -0.73
LRCH3-216ENST00000481048 TREML4Q6UXN2 200 aa10.49□□□□□ -0.73
LRCH3-216ENST00000481048 YEATS2Q9ULM3 1422 aa10.49□□□□□ -0.73
LRCH3-216ENST00000481048 ZNF518AQ6AHZ1 1483 aa10.49□□□□□ -0.73
LRCH3-216ENST00000481048 LRRIQ1Q96JM4 1722 aa10.48□□□□□ -0.73
LRCH3-216ENST00000481048 JUNDP17535 347 aa10.48□□□□□ -0.73
LRCH3-216ENST00000481048 RC3H1Q5TC82 1133 aaKnown RBP10.48□□□□□ -0.73
LRCH3-216ENST00000481048 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.48□□□□□ -0.73
LRCH3-216ENST00000481048 REPIN1Q9BWE0 567 aaKnown RBP10.48□□□□□ -0.73
LRCH3-216ENST00000481048 CCDC18Q5T9S5 1454 aa10.48□□□□□ -0.73
LRCH3-216ENST00000481048 CDC42BPBQ9Y5S2 1711 aa10.47□□□□□ -0.73
LRCH3-216ENST00000481048 FER1L4A9Z1Z3 1794 aa10.47□□□□□ -0.73
LRCH3-216ENST00000481048 SKOR1P84550 965 aa10.47□□□□□ -0.73
LRCH3-216ENST00000481048 C9orf84Q5VXU9 1444 aa10.47□□□□□ -0.73
LRCH3-216ENST00000481048 CASKIN1Q8WXD9 1431 aa10.47□□□□□ -0.73
LRCH3-216ENST00000481048 LMTK3Q96Q04 1460 aa10.47□□□□□ -0.73
LRCH3-216ENST00000481048 ARHGAP5Q13017 1502 aa10.46□□□□□ -0.74
LRCH3-216ENST00000481048 SIGLEC1Q9BZZ2 1709 aa10.46□□□□□ -0.74
LRCH3-216ENST00000481048 KDM5CP41229 1560 aa10.45□□□□□ -0.74
LRCH3-216ENST00000481048 WNT7BP56706 349 aa10.45□□□□□ -0.74
LRCH3-216ENST00000481048 RETREG3Q86VR2 466 aa10.45□□□□□ -0.74
LRCH3-216ENST00000481048 FBXO41Q8TF61 875 aa10.45□□□□□ -0.74
LRCH3-216ENST00000481048 ARHGEF12Q9NZN5 1544 aa10.44□□□□□ -0.74
LRCH3-216ENST00000481048 FDX1P10109 184 aa10.44□□□□□ -0.74
LRCH3-216ENST00000481048 AFAP1Q8N556 730 aa10.44□□□□□ -0.74
LRCH3-216ENST00000481048 HPS1Q92902 700 aa10.44□□□□□ -0.74
LRCH3-216ENST00000481048 ATP13A2Q9NQ11 1180 aa10.44□□□□□ -0.74
LRCH3-216ENST00000481048 REREQ9P2R6 1566 aa10.43□□□□□ -0.74
LRCH3-216ENST00000481048 MLH3Q9UHC1 1453 aa10.43□□□□□ -0.74
LRCH3-216ENST00000481048 C6orf229H3BNL8 230 aa10.43□□□□□ -0.74
LRCH3-216ENST00000481048 SSTR3P32745 418 aaPredicted RBP10.43□□□□□ -0.74
LRCH3-216ENST00000481048 MLECQ14165 292 aa10.43□□□□□ -0.74
LRCH3-216ENST00000481048 LCE2AQ5TA79 106 aaPredicted RBP10.43□□□□□ -0.74
LRCH3-216ENST00000481048 NUDT12Q9BQG2 462 aa10.43□□□□□ -0.74
LRCH3-216ENST00000481048 PCDHGC3Q9UN70 934 aa10.43□□□□□ -0.74
LRCH3-216ENST00000481048 PREX2Q70Z35 1606 aa10.43□□□□□ -0.74
LRCH3-216ENST00000481048 FYCO1Q9BQS8 1478 aa10.42□□□□□ -0.74
LRCH3-216ENST00000481048 PTCRAQ6ISU1 281 aaPredicted RBP10.42□□□□□ -0.74
LRCH3-216ENST00000481048 CDC42BPAQ5VT25 1732 aa10.41□□□□□ -0.74
LRCH3-216ENST00000481048 SPIRE2Q8WWL2 714 aa10.41□□□□□ -0.74
LRCH3-216ENST00000481048 AGLP35573 1532 aa10.4□□□□□ -0.74
LRCH3-216ENST00000481048 WFS1O76024 890 aa10.4□□□□□ -0.74
LRCH3-216ENST00000481048 ALDH1A1P00352 501 aa10.4□□□□□ -0.74
LRCH3-216ENST00000481048 TTLL12Q14166 644 aaPredicted RBP10.4□□□□□ -0.74
LRCH3-216ENST00000481048 PREX1Q8TCU6 1659 aa10.4□□□□□ -0.74
LRCH3-216ENST00000481048 ITSN2Q9NZM3 1697 aa10.4□□□□□ -0.74
LRCH3-216ENST00000481048 DIP2CQ9Y2E4 1556 aa10.39□□□□□ -0.75
LRCH3-216ENST00000481048 ABCC1P33527 1531 aa10.39□□□□□ -0.75
LRCH3-216ENST00000481048 HSPA2P54652 639 aa10.39□□□□□ -0.75
LRCH3-216ENST00000481048 MS4A1P11836 297 aa10.38□□□□□ -0.75
LRCH3-216ENST00000481048 SNRPBP14678 240 aaKnown RBP10.38□□□□□ -0.75
LRCH3-216ENST00000481048 NDUFV2P19404 249 aa10.38□□□□□ -0.75
LRCH3-216ENST00000481048 BARGINQ6ZT62 677 aa10.38□□□□□ -0.75
LRCH3-216ENST00000481048 SENP2Q9HC62 589 aa10.38□□□□□ -0.75
LRCH3-216ENST00000481048 TRAPPC8Q9Y2L5 1435 aa10.38□□□□□ -0.75
LRCH3-216ENST00000481048 KIDINS220Q9ULH0 1771 aa10.37□□□□□ -0.75
LRCH3-216ENST00000481048 EHBP1Q8NDI1 1231 aa10.37□□□□□ -0.75
LRCH3-216ENST00000481048 ESF1Q9H501 851 aaKnown RBP10.37□□□□□ -0.75
LRCH3-216ENST00000481048 ABCA6Q8N139 1617 aa10.36□□□□□ -0.75
LRCH3-216ENST00000481048 KIAA1107Q9UPP5 1409 aa10.36□□□□□ -0.75
LRCH3-216ENST00000481048 MOXD2PA6NHM9 499 aa10.36□□□□□ -0.75
LRCH3-216ENST00000481048 ZMYND10O75800 440 aa10.36□□□□□ -0.75
LRCH3-216ENST00000481048 CCNYL3P0C7X3 344 aa10.36□□□□□ -0.75
LRCH3-216ENST00000481048 CEBPAP49715 358 aaPredicted RBP10.36□□□□□ -0.75
LRCH3-216ENST00000481048 TRIM47Q96LD4 638 aa10.36□□□□□ -0.75
LRCH3-216ENST00000481048 GPATCH8Q9UKJ3 1502 aaKnown RBP10.36□□□□□ -0.75
LRCH3-216ENST00000481048 PLEKHH2Q8IVE3 1493 aa10.36□□□□□ -0.75
LRCH3-216ENST00000481048 CNTLNQ9NXG0 1405 aa10.35□□□□□ -0.75
LRCH3-216ENST00000481048 NFX1Q12986 1120 aaKnown RBP10.35□□□□□ -0.75
LRCH3-216ENST00000481048 CFDP1Q9UEE9 299 aaPredicted RBP10.35□□□□□ -0.75
LRCH3-216ENST00000481048 UHRF1BP1Q6BDS2 1440 aa10.34□□□□□ -0.75
LRCH3-216ENST00000481048 SIAH2O43255 324 aa10.34□□□□□ -0.75
LRCH3-216ENST00000481048 SH3BP2P78314 561 aa10.34□□□□□ -0.75
LRCH3-216ENST00000481048 AMHR2Q16671 573 aa10.34□□□□□ -0.75
LRCH3-216ENST00000481048 ZNF777Q9ULD5 760 aaPredicted RBP10.34□□□□□ -0.75
LRCH3-216ENST00000481048 SAMD9LQ8IVG5 1584 aa10.34□□□□□ -0.75
LRCH3-216ENST00000481048 C3P01024 1663 aa10.34□□□□□ -0.75
LRCH3-216ENST00000481048 SPAG9O60271 1321 aaKnown RBP10.33□□□□□ -0.76
LRCH3-216ENST00000481048 PTPRNQ16849 979 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms