RNA–Protein interactions for RNA: ENST00000480900.1

HSPG2-209, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 500 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-209ENST00000480900 ANKRD36BQ8N2N9 1353 aa23.8■■□□□ 1.4
HSPG2-209ENST00000480900 CRB1P82279 1406 aa23.8■■□□□ 1.4
HSPG2-209ENST00000480900 ZRANB1Q9UGI0 708 aa23.8■■□□□ 1.4
HSPG2-209ENST00000480900 OVOS2A0A0J9YW53 1432 aa23.79■■□□□ 1.4
HSPG2-209ENST00000480900 OVOS2Q6IE36 1432 aa23.79■■□□□ 1.4
HSPG2-209ENST00000480900 SOX12O15370 315 aa23.79■■□□□ 1.4
HSPG2-209ENST00000480900 TCP11L2Q8N4U5 519 aa23.79■■□□□ 1.4
HSPG2-209ENST00000480900 USP35Q9P2H5 1018 aa23.79■■□□□ 1.4
HSPG2-209ENST00000480900 MYOM1P52179 1685 aa23.79■■□□□ 1.4
HSPG2-209ENST00000480900 PARP4Q9UKK3 1724 aaKnown RBP23.79■■□□□ 1.4
HSPG2-209ENST00000480900 WNK3Q9BYP7 1800 aa23.78■■□□□ 1.4
HSPG2-209ENST00000480900 THRAP3Q9Y2W1 955 aaKnown RBP23.78■■□□□ 1.4
HSPG2-209ENST00000480900 AXIN2Q9Y2T1 843 aa23.76■■□□□ 1.39
HSPG2-209ENST00000480900 RGPD1P0DJD0 1748 aa23.76■■□□□ 1.39
HSPG2-209ENST00000480900 WDR17Q8IZU2 1322 aa23.75■■□□□ 1.39
HSPG2-209ENST00000480900 KIF20BQ96Q89 1820 aa23.73■■□□□ 1.39
HSPG2-209ENST00000480900 TOM1L2Q6ZVM7 507 aa23.72■■□□□ 1.39
HSPG2-209ENST00000480900 SF3B2Q13435 895 aaKnown RBP23.71■■□□□ 1.39
HSPG2-209ENST00000480900 EIF4G2P78344 907 aaKnown RBP eCLIP23.7■■□□□ 1.38
HSPG2-209ENST00000480900 TNS1Q9HBL0 1735 aaKnown RBP23.7■■□□□ 1.38
HSPG2-209ENST00000480900 LRRC37A3O60309 1634 aa23.7■■□□□ 1.38
HSPG2-209ENST00000480900 FAM182BQ5T319 152 aa23.69■■□□□ 1.38
HSPG2-209ENST00000480900 COG3Q96JB2 828 aa23.69■■□□□ 1.38
HSPG2-209ENST00000480900 CSB-PGBD3P0DP91 1061 aa23.67■■□□□ 1.38
HSPG2-209ENST00000480900 PDE3BQ13370 1112 aa23.67■■□□□ 1.38
HSPG2-209ENST00000480900 FAM196AQ6ZSG2 479 aa23.67■■□□□ 1.38
HSPG2-209ENST00000480900 CARD10Q9BWT7 1032 aa23.66■■□□□ 1.38
HSPG2-209ENST00000480900 FAM208AQ9UK61 1670 aaKnown RBP23.65■■□□□ 1.38
HSPG2-209ENST00000480900 HSPA5P11021 654 aaKnown RBP23.65■■□□□ 1.38
HSPG2-209ENST00000480900 CDCA7Q9BWT1 371 aaPredicted RBP23.65■■□□□ 1.38
HSPG2-209ENST00000480900 CCDC7Q96M83 1385 aa23.65■■□□□ 1.38
HSPG2-209ENST00000480900 ERBB3P21860 1342 aa23.64■■□□□ 1.38
HSPG2-209ENST00000480900 FYB1O15117 783 aa23.64■■□□□ 1.37
HSPG2-209ENST00000480900 DEFB132Q7Z7B7 95 aa23.64■■□□□ 1.37
HSPG2-209ENST00000480900 PEAK1Q9H792 1746 aa23.63■■□□□ 1.37
HSPG2-209ENST00000480900 DISP2A7MBM2 1401 aa23.62■■□□□ 1.37
HSPG2-209ENST00000480900 SBF2Q86WG5 1849 aa23.62■■□□□ 1.37
HSPG2-209ENST00000480900 BAG6P46379 1132 aa23.62■■□□□ 1.37
HSPG2-209ENST00000480900 NSD3Q9BZ95 1437 aa23.6■■□□□ 1.37
HSPG2-209ENST00000480900 C11orf95C9JLR9 678 aaPredicted RBP23.6■■□□□ 1.37
HSPG2-209ENST00000480900 DDB1Q16531 1140 aa23.6■■□□□ 1.37
HSPG2-209ENST00000480900 IP6K1Q92551 441 aa23.6■■□□□ 1.37
HSPG2-209ENST00000480900 CARD14Q9BXL6 1004 aa23.6■■□□□ 1.37
HSPG2-209ENST00000480900 GGNBP2Q9H3C7 697 aa23.6■■□□□ 1.37
HSPG2-209ENST00000480900 MAP3K19Q56UN5 1328 aa23.59■■□□□ 1.37
HSPG2-209ENST00000480900 ANKRD24Q8TF21 1146 aa23.59■■□□□ 1.37
HSPG2-209ENST00000480900 OVOS2A0A0G2JMS6 1433 aa23.59■■□□□ 1.37
HSPG2-209ENST00000480900 RTL1A6NKG5 1358 aa23.57■■□□□ 1.36
HSPG2-209ENST00000480900 TRIM37O94972 964 aa23.57■■□□□ 1.36
HSPG2-209ENST00000480900 NLRP2Q9NX02 1062 aa23.57■■□□□ 1.36
HSPG2-209ENST00000480900 RGPD2P0DJD1 1756 aa23.55■■□□□ 1.36
HSPG2-209ENST00000480900 HOXC9P31274 260 aa23.55■■□□□ 1.36
HSPG2-209ENST00000480900 AMPHP49418 695 aa23.55■■□□□ 1.36
HSPG2-209ENST00000480900 POLR3GLQ9BT43 218 aa23.55■■□□□ 1.36
HSPG2-209ENST00000480900 ANKRD26Q9UPS8 1709 aa23.55■■□□□ 1.36
HSPG2-209ENST00000480900 TNS2Q63HR2 1409 aa23.54■■□□□ 1.36
HSPG2-209ENST00000480900 FBLN1P23142 703 aa23.54■■□□□ 1.36
HSPG2-209ENST00000480900 EN1Q05925 392 aaPredicted RBP23.53■■□□□ 1.36
HSPG2-209ENST00000480900 MAP2P11137 1827 aaKnown RBP23.52■■□□□ 1.36
HSPG2-209ENST00000480900 BCL9O00512 1426 aa23.52■■□□□ 1.36
HSPG2-209ENST00000480900 CGNL1Q0VF96 1302 aa23.52■■□□□ 1.36
HSPG2-209ENST00000480900 KAT6BQ8WYB5 2073 aa23.52■■□□□ 1.35
HSPG2-209ENST00000480900 EXOC5O00471 708 aa23.51■■□□□ 1.35
HSPG2-209ENST00000480900 RRS1Q15050 365 aaKnown RBP23.51■■□□□ 1.35
HSPG2-209ENST00000480900 KIF24Q5T7B8 1368 aa23.51■■□□□ 1.35
HSPG2-209ENST00000480900 PARD3Q8TEW0 1356 aa23.51■■□□□ 1.35
HSPG2-209ENST00000480900 IL2RBP14784 551 aa23.5■■□□□ 1.35
HSPG2-209ENST00000480900 MARCH10Q8NA82 808 aaPredicted RBP23.5■■□□□ 1.35
HSPG2-209ENST00000480900 RREB1Q92766 1687 aa23.5■■□□□ 1.35
HSPG2-209ENST00000480900 RGPD3A6NKT7 1758 aaPredicted RBP23.5■■□□□ 1.35
HSPG2-209ENST00000480900 RGPD4Q7Z3J3 1758 aa23.5■■□□□ 1.35
HSPG2-209ENST00000480900 APBA3O96018 575 aa23.49■■□□□ 1.35
HSPG2-209ENST00000480900 LTV1Q96GA3 475 aaPredicted RBP23.49■■□□□ 1.35
HSPG2-209ENST00000480900 CAMKK2Q96RR4 588 aa23.48■■□□□ 1.35
HSPG2-209ENST00000480900 FLT4P35916 1363 aa23.47■■□□□ 1.35
HSPG2-209ENST00000480900 SMG6Q86US8 1419 aaKnown RBP23.46■■□□□ 1.35
HSPG2-209ENST00000480900 NUP188Q5SRE5 1749 aa23.45■■□□□ 1.34
HSPG2-209ENST00000480900 INSRP06213 1382 aa23.45■■□□□ 1.34
HSPG2-209ENST00000480900 EZH2Q15910 746 aaKnown RBP23.45■■□□□ 1.34
HSPG2-209ENST00000480900 PANK3Q9H999 370 aa23.44■■□□□ 1.34
HSPG2-209ENST00000480900 NHSQ6T4R5 1651 aa23.43■■□□□ 1.34
HSPG2-209ENST00000480900 BCL11BQ9C0K0 894 aaPredicted RBP23.42■■□□□ 1.34
HSPG2-209ENST00000480900 SRCAPQ6ZRS2 3230 aa23.42■■□□□ 1.34
HSPG2-209ENST00000480900 HSP90AB2PQ58FF8 381 aa23.41■■□□□ 1.34
HSPG2-209ENST00000480900 SHANK3Q9BYB0 1731 aa23.41■■□□□ 1.34
HSPG2-209ENST00000480900 NSD2O96028 1365 aa23.4■■□□□ 1.34
HSPG2-209ENST00000480900 KIF7Q2M1P5 1343 aa23.4■■□□□ 1.34
HSPG2-209ENST00000480900 EMILIN1Q9Y6C2 1016 aa23.4■■□□□ 1.34
HSPG2-209ENST00000480900 NBPF6Q5VWK0 638 aa23.39■■□□□ 1.33
HSPG2-209ENST00000480900 NBPF4Q96M43 638 aa23.39■■□□□ 1.33
HSPG2-209ENST00000480900 PLSCR1O15162 318 aa23.38■■□□□ 1.33
HSPG2-209ENST00000480900 MEGF6O75095 1541 aa23.38■■□□□ 1.33
HSPG2-209ENST00000480900 PTF1AQ7RTS3 328 aa23.37■■□□□ 1.33
HSPG2-209ENST00000480900 BTAF1O14981 1849 aa23.36■■□□□ 1.33
HSPG2-209ENST00000480900 WASHC2AQ641Q2 1341 aa23.35■■□□□ 1.33
HSPG2-209ENST00000480900 PSDA5PKW4 1024 aaPredicted RBP23.34■■□□□ 1.33
HSPG2-209ENST00000480900 PPM1GO15355 546 aaPredicted RBP23.34■■□□□ 1.33
HSPG2-209ENST00000480900 POLKQ9UBT6 870 aa23.34■■□□□ 1.33
HSPG2-209ENST00000480900 LRP5O75197 1615 aa23.33■■□□□ 1.33
HSPG2-209ENST00000480900 USHBP1Q8N6Y0 703 aa23.33■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms