RNA–Protein interactions for RNA: ENST00000480609.1

COL4A2-206, Transcript of collagen type IV alpha 2 chain, humanhuman

TSL 2

Gene COL4A2, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-206ENST00000480609 WDR43Q15061 677 aaKnown RBP eCLIP17.58■□□□□ 0.4
COL4A2-206ENST00000480609 HSP90AB2PQ58FF8 381 aa17.58■□□□□ 0.4
COL4A2-206ENST00000480609 LMO7Q8WWI1 1683 aa17.58■□□□□ 0.4
COL4A2-206ENST00000480609 KDRP35968 1356 aa17.57■□□□□ 0.4
COL4A2-206ENST00000480609 FCHSD2O94868 740 aa17.57■□□□□ 0.4
COL4A2-206ENST00000480609 NGEFQ8N5V2 710 aa17.57■□□□□ 0.4
COL4A2-206ENST00000480609 ADAMTS8Q9UP79 889 aa17.57■□□□□ 0.4
COL4A2-206ENST00000480609 KIAA0232Q92628 1395 aa17.56■□□□□ 0.4
COL4A2-206ENST00000480609 SPATA31A6Q5VVP1 1343 aa17.56■□□□□ 0.4
COL4A2-206ENST00000480609 IGSF1Q8N6C5 1336 aa17.56■□□□□ 0.4
COL4A2-206ENST00000480609 PNNQ9H307 717 aaKnown RBP17.56■□□□□ 0.4
COL4A2-206ENST00000480609 FAM9BQ8IZU0 186 aa17.55■□□□□ 0.4
COL4A2-206ENST00000480609 CABLES1Q8TDN4 633 aa17.55■□□□□ 0.4
COL4A2-206ENST00000480609 CAMTA1Q9Y6Y1 1673 aa17.55■□□□□ 0.4
COL4A2-206ENST00000480609 PPM1GO15355 546 aaPredicted RBP17.54■□□□□ 0.4
COL4A2-206ENST00000480609 ERBB3P21860 1342 aa17.53■□□□□ 0.4
COL4A2-206ENST00000480609 SOX12O15370 315 aa17.53■□□□□ 0.4
COL4A2-206ENST00000480609 ZC3H6P61129 1189 aaKnown RBP17.53■□□□□ 0.4
COL4A2-206ENST00000480609 FAM208AQ9UK61 1670 aaKnown RBP17.52■□□□□ 0.4
COL4A2-206ENST00000480609 AXIN2Q9Y2T1 843 aa17.52■□□□□ 0.4
COL4A2-206ENST00000480609 COL14A1Q05707 1796 aaKnown RBP17.52■□□□□ 0.4
COL4A2-206ENST00000480609 U2AF1L5P0DN76 240 aaPredicted RBP17.51■□□□□ 0.39
COL4A2-206ENST00000480609 U2AF1Q01081 240 aaKnown RBP eCLIP17.51■□□□□ 0.39
COL4A2-206ENST00000480609 PLEKHF1Q96S99 279 aa17.51■□□□□ 0.39
COL4A2-206ENST00000480609 RSPH6AQ9H0K4 717 aa17.51■□□□□ 0.39
COL4A2-206ENST00000480609 PRDM11Q9NQV5 511 aa17.51■□□□□ 0.39
COL4A2-206ENST00000480609 HSPA1LP34931 641 aa17.5■□□□□ 0.39
COL4A2-206ENST00000480609 RUNDC1Q96C34 613 aa17.5■□□□□ 0.39
COL4A2-206ENST00000480609 EYA1Q99502 592 aa17.5■□□□□ 0.39
COL4A2-206ENST00000480609 COL5A2P05997 1499 aaPredicted RBP17.49■□□□□ 0.39
COL4A2-206ENST00000480609 FAM83GA6ND36 823 aa17.48■□□□□ 0.39
COL4A2-206ENST00000480609 U2SURPO15042 1029 aaKnown RBP17.48■□□□□ 0.39
COL4A2-206ENST00000480609 HAP1P54257 671 aaPredicted RBP17.48■□□□□ 0.39
COL4A2-206ENST00000480609 ANKRD24Q8TF21 1146 aa17.48■□□□□ 0.39
COL4A2-206ENST00000480609 SLIT2O94813 1529 aa17.47■□□□□ 0.39
COL4A2-206ENST00000480609 PHF23Q9BUL5 403 aaPredicted RBP17.47■□□□□ 0.39
COL4A2-206ENST00000480609 ZBED9Q6R2W3 1325 aa17.47■□□□□ 0.39
COL4A2-206ENST00000480609 WDR17Q8IZU2 1322 aa17.47■□□□□ 0.39
COL4A2-206ENST00000480609 CCDC27Q2M243 656 aa17.46■□□□□ 0.39
COL4A2-206ENST00000480609 FBXO41Q8TF61 875 aa17.46■□□□□ 0.39
COL4A2-206ENST00000480609 NWD2Q9ULI1 1742 aa17.45■□□□□ 0.38
COL4A2-206ENST00000480609 NBPF6Q5VWK0 638 aa17.45■□□□□ 0.38
COL4A2-206ENST00000480609 NBPF4Q96M43 638 aa17.45■□□□□ 0.38
COL4A2-206ENST00000480609 RGPD5Q99666 1765 aa17.45■□□□□ 0.38
COL4A2-206ENST00000480609 CHRNA2Q15822 529 aa17.44■□□□□ 0.38
COL4A2-206ENST00000480609 SULT6B1Q6IMI4 303 aa17.44■□□□□ 0.38
COL4A2-206ENST00000480609 PRKAR2BP31323 418 aa17.43■□□□□ 0.38
COL4A2-206ENST00000480609 FNBP4Q8N3X1 1017 aaPredicted RBP17.43■□□□□ 0.38
COL4A2-206ENST00000480609 CARD10Q9BWT7 1032 aa17.43■□□□□ 0.38
COL4A2-206ENST00000480609 ZNF521Q96K83 1311 aa17.42■□□□□ 0.38
COL4A2-206ENST00000480609 LRP6O75581 1613 aa17.41■□□□□ 0.38
COL4A2-206ENST00000480609 HNRNPUQ00839 825 aaKnown RBP eCLIP17.41■□□□□ 0.38
COL4A2-206ENST00000480609 AEBP1Q8IUX7 1158 aa17.41■□□□□ 0.38
COL4A2-206ENST00000480609 TCP11L2Q8N4U5 519 aa17.41■□□□□ 0.38
COL4A2-206ENST00000480609 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.41■□□□□ 0.38
COL4A2-206ENST00000480609 NRAPQ86VF7 1730 aa17.41■□□□□ 0.38
COL4A2-206ENST00000480609 CRB1P82279 1406 aa17.4■□□□□ 0.38
COL4A2-206ENST00000480609 APAF1O14727 1248 aa17.4■□□□□ 0.38
COL4A2-206ENST00000480609 NEFMP07197 916 aa17.4■□□□□ 0.38
COL4A2-206ENST00000480609 MAPK8IP3Q9UPT6 1336 aa17.4■□□□□ 0.38
COL4A2-206ENST00000480609 PLCH1Q4KWH8 1693 aa17.39■□□□□ 0.37
COL4A2-206ENST00000480609 HMOX1P09601 288 aa17.39■□□□□ 0.37
COL4A2-206ENST00000480609 TMPOP42166 694 aaKnown RBP17.39■□□□□ 0.37
COL4A2-206ENST00000480609 PDE3BQ13370 1112 aa17.39■□□□□ 0.37
COL4A2-206ENST00000480609 BTG4Q9NY30 223 aa17.39■□□□□ 0.37
COL4A2-206ENST00000480609 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.38■□□□□ 0.37
COL4A2-206ENST00000480609 ZBTB7CA1YPR0 619 aa17.38■□□□□ 0.37
COL4A2-206ENST00000480609 NFE2L2Q16236 605 aa17.38■□□□□ 0.37
COL4A2-206ENST00000480609 AMOTQ4VCS5 1084 aa17.38■□□□□ 0.37
COL4A2-206ENST00000480609 CCDC146Q8IYE0 955 aa17.38■□□□□ 0.37
COL4A2-206ENST00000480609 LTV1Q96GA3 475 aaPredicted RBP17.38■□□□□ 0.37
COL4A2-206ENST00000480609 RGPD2P0DJD1 1756 aa17.38■□□□□ 0.37
COL4A2-206ENST00000480609 HTATSF1O43719 755 aaKnown RBP17.37■□□□□ 0.37
COL4A2-206ENST00000480609 PLEKHG5O94827 1062 aa17.37■□□□□ 0.37
COL4A2-206ENST00000480609 GAS2L2Q8NHY3 880 aa17.37■□□□□ 0.37
COL4A2-206ENST00000480609 PHACTR3Q96KR7 559 aa17.37■□□□□ 0.37
COL4A2-206ENST00000480609 BCL9LQ86UU0 1499 aa17.37■□□□□ 0.37
COL4A2-206ENST00000480609 THRAP3Q9Y2W1 955 aaKnown RBP17.36■□□□□ 0.37
COL4A2-206ENST00000480609 ADAMTS2O95450 1211 aa17.35■□□□□ 0.37
COL4A2-206ENST00000480609 CSB-PGBD3P0DP91 1061 aa17.35■□□□□ 0.37
COL4A2-206ENST00000480609 UNC5CLQ8IV45 518 aa17.35■□□□□ 0.37
COL4A2-206ENST00000480609 WDR63Q8IWG1 891 aa17.35■□□□□ 0.37
COL4A2-206ENST00000480609 NLRP2Q9NX02 1062 aa17.35■□□□□ 0.37
COL4A2-206ENST00000480609 DISP2A7MBM2 1401 aa17.35■□□□□ 0.37
COL4A2-206ENST00000480609 OVOS2A0A0G2JMS6 1433 aa17.34■□□□□ 0.37
COL4A2-206ENST00000480609 NUTM2BA6NNL0 878 aaPredicted RBP17.34■□□□□ 0.37
COL4A2-206ENST00000480609 NUTM2EB1AL46 878 aaPredicted RBP17.34■□□□□ 0.37
COL4A2-206ENST00000480609 EVA1CP58658 441 aa17.34■□□□□ 0.37
COL4A2-206ENST00000480609 LMOD3Q0VAK6 560 aa17.34■□□□□ 0.37
COL4A2-206ENST00000480609 LARP1Q6PKG0 1096 aaKnown RBP17.34■□□□□ 0.37
COL4A2-206ENST00000480609 TOM1L2Q6ZVM7 507 aa17.34■□□□□ 0.37
COL4A2-206ENST00000480609 NUTM2AQ8IVF1 878 aaPredicted RBP17.34■□□□□ 0.37
COL4A2-206ENST00000480609 CDCA7Q9BWT1 371 aaPredicted RBP17.34■□□□□ 0.37
COL4A2-206ENST00000480609 IL16Q14005 1332 aa17.33■□□□□ 0.36
COL4A2-206ENST00000480609 VPS72Q15906 364 aa17.33■□□□□ 0.36
COL4A2-206ENST00000480609 WWC1Q8IX03 1113 aa17.33■□□□□ 0.36
COL4A2-206ENST00000480609 TRIM35Q9UPQ4 493 aa17.33■□□□□ 0.36
COL4A2-206ENST00000480609 PKD1L3Q7Z443 1732 aa17.33■□□□□ 0.36
COL4A2-206ENST00000480609 SPATA31A1Q5TZJ5 1347 aa17.32■□□□□ 0.36
COL4A2-206ENST00000480609 SPATA31A5Q5VU36 1347 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms