RNA–Protein interactions for RNA: ENST00000480461.1

TRA2B-212, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-212ENST00000480461 NUP188Q5SRE5 1749 aa16.87■□□□□ 0.29
TRA2B-212ENST00000480461 PARD3Q8TEW0 1356 aa16.86■□□□□ 0.29
TRA2B-212ENST00000480461 MON2Q7Z3U7 1717 aa16.85■□□□□ 0.29
TRA2B-212ENST00000480461 DDX10Q13206 875 aaKnown RBP16.85■□□□□ 0.29
TRA2B-212ENST00000480461 NSD3Q9BZ95 1437 aa16.85■□□□□ 0.29
TRA2B-212ENST00000480461 NRKQ7Z2Y5 1582 aa16.85■□□□□ 0.29
TRA2B-212ENST00000480461 FBLN1P23142 703 aa16.84■□□□□ 0.29
TRA2B-212ENST00000480461 NLRP13Q86W25 1043 aa16.84■□□□□ 0.29
TRA2B-212ENST00000480461 GGNBP2Q9H3C7 697 aa16.84■□□□□ 0.29
TRA2B-212ENST00000480461 USP31Q70CQ4 1352 aa16.84■□□□□ 0.29
TRA2B-212ENST00000480461 USP19O94966 1318 aa16.83■□□□□ 0.28
TRA2B-212ENST00000480461 TRIM37O94972 964 aa16.83■□□□□ 0.28
TRA2B-212ENST00000480461 PIK3C2AO00443 1686 aa16.82■□□□□ 0.28
TRA2B-212ENST00000480461 GCP02774 474 aa16.82■□□□□ 0.28
TRA2B-212ENST00000480461 AMER1Q5JTC6 1135 aaPredicted RBP16.82■□□□□ 0.28
TRA2B-212ENST00000480461 SPATA31A1Q5TZJ5 1347 aa16.81■□□□□ 0.28
TRA2B-212ENST00000480461 FAM196AQ6ZSG2 479 aa16.81■□□□□ 0.28
TRA2B-212ENST00000480461 APBA3O96018 575 aa16.8■□□□□ 0.28
TRA2B-212ENST00000480461 PRDM11Q9NQV5 511 aa16.8■□□□□ 0.28
TRA2B-212ENST00000480461 KNSTRNQ9Y448 316 aa16.8■□□□□ 0.28
TRA2B-212ENST00000480461 PHRF1Q9P1Y6 1649 aaKnown RBP16.8■□□□□ 0.28
TRA2B-212ENST00000480461 ZC3H6P61129 1189 aaKnown RBP16.79■□□□□ 0.28
TRA2B-212ENST00000480461 CGNL1Q0VF96 1302 aa16.78■□□□□ 0.28
TRA2B-212ENST00000480461 SOX12O15370 315 aa16.78■□□□□ 0.28
TRA2B-212ENST00000480461 OVOS2A0A0J9YW53 1432 aa16.78■□□□□ 0.28
TRA2B-212ENST00000480461 OVOS2Q6IE36 1432 aa16.78■□□□□ 0.28
TRA2B-212ENST00000480461 KIAA0232Q92628 1395 aa16.77■□□□□ 0.28
TRA2B-212ENST00000480461 COG3Q96JB2 828 aa16.77■□□□□ 0.28
TRA2B-212ENST00000480461 CAMTA1Q9Y6Y1 1673 aa16.75■□□□□ 0.27
TRA2B-212ENST00000480461 CHRNA2Q15822 529 aa16.75■□□□□ 0.27
TRA2B-212ENST00000480461 CC2D1BQ5T0F9 858 aaKnown RBP16.75■□□□□ 0.27
TRA2B-212ENST00000480461 ARHGEF25Q86VW2 580 aa16.75■□□□□ 0.27
TRA2B-212ENST00000480461 SLIT3O75094 1523 aa16.75■□□□□ 0.27
TRA2B-212ENST00000480461 CNGB1Q14028 1251 aaPredicted RBP16.74■□□□□ 0.27
TRA2B-212ENST00000480461 STRN4Q9NRL3 753 aa16.74■□□□□ 0.27
TRA2B-212ENST00000480461 NBPF14Q5TI25 921 aa16.73■□□□□ 0.27
TRA2B-212ENST00000480461 KCNH5Q8NCM2 988 aa16.73■□□□□ 0.27
TRA2B-212ENST00000480461 SPON1Q9HCB6 807 aa16.73■□□□□ 0.27
TRA2B-212ENST00000480461 PPP1R1BQ9UD71 204 aaPredicted RBP16.73■□□□□ 0.27
TRA2B-212ENST00000480461 AXIN2Q9Y2T1 843 aa16.73■□□□□ 0.27
TRA2B-212ENST00000480461 TNNT2P45379 298 aaPredicted RBP16.72■□□□□ 0.27
TRA2B-212ENST00000480461 BARGINQ6ZT62 677 aa16.72■□□□□ 0.27
TRA2B-212ENST00000480461 NFAT5O94916 1531 aa16.71■□□□□ 0.27
TRA2B-212ENST00000480461 KCNQ2O43526 872 aa16.71■□□□□ 0.27
TRA2B-212ENST00000480461 RRS1Q15050 365 aaKnown RBP16.71■□□□□ 0.27
TRA2B-212ENST00000480461 MORC1Q86VD1 984 aa16.71■□□□□ 0.27
TRA2B-212ENST00000480461 USP35Q9P2H5 1018 aa16.71■□□□□ 0.27
TRA2B-212ENST00000480461 CPDO75976 1380 aa16.71■□□□□ 0.27
TRA2B-212ENST00000480461 NPC1L1Q9UHC9 1359 aa16.71■□□□□ 0.27
TRA2B-212ENST00000480461 USP54Q70EL1 1684 aa16.71■□□□□ 0.27
TRA2B-212ENST00000480461 LMO7Q8WWI1 1683 aa16.71■□□□□ 0.27
TRA2B-212ENST00000480461 RGPD3A6NKT7 1758 aaPredicted RBP16.7■□□□□ 0.26
TRA2B-212ENST00000480461 RGPD4Q7Z3J3 1758 aa16.7■□□□□ 0.26
TRA2B-212ENST00000480461 CASZ1Q86V15 1759 aa16.7■□□□□ 0.26
TRA2B-212ENST00000480461 PDE3BQ13370 1112 aa16.7■□□□□ 0.26
TRA2B-212ENST00000480461 MAP3K19Q56UN5 1328 aa16.7■□□□□ 0.26
TRA2B-212ENST00000480461 ZBTB7CA1YPR0 619 aa16.69■□□□□ 0.26
TRA2B-212ENST00000480461 POLKQ9UBT6 870 aa16.69■□□□□ 0.26
TRA2B-212ENST00000480461 PARP4Q9UKK3 1724 aaKnown RBP16.69■□□□□ 0.26
TRA2B-212ENST00000480461 UTRNP46939 3433 aa16.68■□□□□ 0.26
TRA2B-212ENST00000480461 NSD2O96028 1365 aa16.68■□□□□ 0.26
TRA2B-212ENST00000480461 DCAF8L1A6NGE4 600 aa16.68■□□□□ 0.26
TRA2B-212ENST00000480461 EMILIN1Q9Y6C2 1016 aa16.68■□□□□ 0.26
TRA2B-212ENST00000480461 PEAK1Q9H792 1746 aa16.67■□□□□ 0.26
TRA2B-212ENST00000480461 KIF20BQ96Q89 1820 aa16.67■□□□□ 0.26
TRA2B-212ENST00000480461 AATKQ6ZMQ8 1374 aa16.66■□□□□ 0.26
TRA2B-212ENST00000480461 LARP1Q6PKG0 1096 aaKnown RBP16.66■□□□□ 0.26
TRA2B-212ENST00000480461 IP6K1Q92551 441 aa16.66■□□□□ 0.26
TRA2B-212ENST00000480461 TCP11L2Q8N4U5 519 aa16.65■□□□□ 0.26
TRA2B-212ENST00000480461 COL18A1P39060 1754 aa16.64■□□□□ 0.25
TRA2B-212ENST00000480461 HOXC9P31274 260 aa16.64■□□□□ 0.25
TRA2B-212ENST00000480461 HSP90AB2PQ58FF8 381 aa16.64■□□□□ 0.25
TRA2B-212ENST00000480461 ANO8Q9HCE9 1232 aaPredicted RBP16.64■□□□□ 0.25
TRA2B-212ENST00000480461 LRRC37A3O60309 1634 aa16.63■□□□□ 0.25
TRA2B-212ENST00000480461 OVOS2A0A0G2JMS6 1433 aa16.63■□□□□ 0.25
TRA2B-212ENST00000480461 EVA1CP58658 441 aa16.63■□□□□ 0.25
TRA2B-212ENST00000480461 ZNF784Q8NCA9 323 aaPredicted RBP16.63■□□□□ 0.25
TRA2B-212ENST00000480461 COL5A2P05997 1499 aaPredicted RBP16.62■□□□□ 0.25
TRA2B-212ENST00000480461 PPM1GO15355 546 aaPredicted RBP16.62■□□□□ 0.25
TRA2B-212ENST00000480461 AMPHP49418 695 aa16.62■□□□□ 0.25
TRA2B-212ENST00000480461 MTHFSP49914 203 aa16.62■□□□□ 0.25
TRA2B-212ENST00000480461 THRAP3Q9Y2W1 955 aaKnown RBP16.62■□□□□ 0.25
TRA2B-212ENST00000480461 SBF2Q86WG5 1849 aa16.61■□□□□ 0.25
TRA2B-212ENST00000480461 PPP2R1AP30153 589 aa16.61■□□□□ 0.25
TRA2B-212ENST00000480461 ANKRD26Q9UPS8 1709 aa16.6■□□□□ 0.25
TRA2B-212ENST00000480461 PLSCR1O15162 318 aa16.59■□□□□ 0.25
TRA2B-212ENST00000480461 PDGFDQ9GZP0 370 aaPredicted RBP16.59■□□□□ 0.25
TRA2B-212ENST00000480461 PTGER2P43116 358 aa16.58■□□□□ 0.24
TRA2B-212ENST00000480461 ANKRD24Q8TF21 1146 aa16.58■□□□□ 0.24
TRA2B-212ENST00000480461 LTV1Q96GA3 475 aaPredicted RBP16.58■□□□□ 0.24
TRA2B-212ENST00000480461 PRKRIP1Q9H875 184 aaPredicted RBP16.58■□□□□ 0.24
TRA2B-212ENST00000480461 CRB1P82279 1406 aa16.58■□□□□ 0.24
TRA2B-212ENST00000480461 MAP2P11137 1827 aaKnown RBP16.56■□□□□ 0.24
TRA2B-212ENST00000480461 LTN1O94822 1766 aa16.56■□□□□ 0.24
TRA2B-212ENST00000480461 SMG6Q86US8 1419 aaKnown RBP16.56■□□□□ 0.24
TRA2B-212ENST00000480461 INSRP06213 1382 aa16.56■□□□□ 0.24
TRA2B-212ENST00000480461 FLT4P35916 1363 aa16.56■□□□□ 0.24
TRA2B-212ENST00000480461 KIF24Q5T7B8 1368 aa16.56■□□□□ 0.24
TRA2B-212ENST00000480461 ERBB3P21860 1342 aa16.56■□□□□ 0.24
TRA2B-212ENST00000480461 SENP3-EIF4A1A0A087X0R7 540 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms