RNA–Protein interactions for RNA: ENST00000480321.1

MCF2L-225, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 5,727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-225ENST00000480321 DAPK1P53355 1430 aa16.18■□□□□ 0.18
MCF2L-225ENST00000480321 CBFA2T2O43439 604 aa16.18■□□□□ 0.18
MCF2L-225ENST00000480321 WDR97A6NE52 1622 aa16.18■□□□□ 0.18
MCF2L-225ENST00000480321 AQRO60306 1485 aaKnown RBP eCLIP16.18■□□□□ 0.18
MCF2L-225ENST00000480321 OFD1O75665 1012 aa16.18■□□□□ 0.18
MCF2L-225ENST00000480321 EPS15P42566 896 aa16.18■□□□□ 0.18
MCF2L-225ENST00000480321 RDXP35241 583 aaKnown RBP16.18■□□□□ 0.18
MCF2L-225ENST00000480321 AFAP1Q8N556 730 aa16.18■□□□□ 0.18
MCF2L-225ENST00000480321 FIBPO43427 364 aa16.18■□□□□ 0.18
MCF2L-225ENST00000480321 CT47A1Q5JQC4 288 aaPredicted RBP16.18■□□□□ 0.18
MCF2L-225ENST00000480321 STRN4Q9NRL3 753 aa16.18■□□□□ 0.18
MCF2L-225ENST00000480321 MAGEC2Q9UBF1 373 aaPredicted RBP16.18■□□□□ 0.18
MCF2L-225ENST00000480321 POLA1P09884 1462 aaPredicted RBP16.18■□□□□ 0.18
MCF2L-225ENST00000480321 RPAP2Q8IXW5 612 aaPredicted RBP16.18■□□□□ 0.18
MCF2L-225ENST00000480321 TNMDQ9H2S6 317 aa16.18■□□□□ 0.18
MCF2L-225ENST00000480321 DNAJC2Q99543 621 aaKnown RBP16.17■□□□□ 0.18
MCF2L-225ENST00000480321 LEKR1Q6ZMV7 388 aa16.17■□□□□ 0.18
MCF2L-225ENST00000480321 RRP9O43818 475 aaKnown RBP16.17■□□□□ 0.18
MCF2L-225ENST00000480321 SLC3A2P08195 630 aaKnown RBP16.17■□□□□ 0.18
MCF2L-225ENST00000480321 CCDC112Q8NEF3 446 aa16.17■□□□□ 0.18
MCF2L-225ENST00000480321 PAF1Q8N7H5 531 aa16.16■□□□□ 0.18
MCF2L-225ENST00000480321 ATAD2Q6PL18 1390 aa16.16■□□□□ 0.18
MCF2L-225ENST00000480321 ANKRD30BQ9BXX2 1392 aa16.16■□□□□ 0.18
MCF2L-225ENST00000480321 SLFN5Q08AF3 891 aa16.16■□□□□ 0.18
MCF2L-225ENST00000480321 KDM4AO75164 1064 aa16.16■□□□□ 0.18
MCF2L-225ENST00000480321 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.16■□□□□ 0.18
MCF2L-225ENST00000480321 ESPNB1AK53 854 aa16.15■□□□□ 0.18
MCF2L-225ENST00000480321 NBPF1Q3BBV0 1214 aa16.15■□□□□ 0.18
MCF2L-225ENST00000480321 ODF2Q5BJF6 829 aa16.15■□□□□ 0.18
MCF2L-225ENST00000480321 PKNOX2Q96KN3 472 aa16.15■□□□□ 0.18
MCF2L-225ENST00000480321 LUC7LQ9NQ29 371 aaKnown RBP16.15■□□□□ 0.18
MCF2L-225ENST00000480321 TATP17735 454 aaPredicted RBP16.15■□□□□ 0.18
MCF2L-225ENST00000480321 KRT32Q14532 448 aa16.15■□□□□ 0.18
MCF2L-225ENST00000480321 PRAM1Q96QH2 718 aa16.15■□□□□ 0.18
MCF2L-225ENST00000480321 PPP6R1Q9UPN7 881 aa16.15■□□□□ 0.18
MCF2L-225ENST00000480321 PDCL2Q8N4E4 241 aa16.14■□□□□ 0.17
MCF2L-225ENST00000480321 CFAP45Q9UL16 551 aa16.14■□□□□ 0.17
MCF2L-225ENST00000480321 ERLIN1O75477 346 aa16.14■□□□□ 0.17
MCF2L-225ENST00000480321 ZNHIT6Q9NWK9 470 aaKnown RBP16.14■□□□□ 0.17
MCF2L-225ENST00000480321 SLC4A2P04920 1241 aa16.14■□□□□ 0.17
MCF2L-225ENST00000480321 CCDC158Q5M9N0 1113 aa16.14■□□□□ 0.17
MCF2L-225ENST00000480321 CCDC191Q8NCU4 936 aa16.14■□□□□ 0.17
MCF2L-225ENST00000480321 FCHSD2O94868 740 aa16.14■□□□□ 0.17
MCF2L-225ENST00000480321 H0YHG0 523 aa16.13■□□□□ 0.17
MCF2L-225ENST00000480321 TSR2Q969E8 191 aaKnown RBP16.13■□□□□ 0.17
MCF2L-225ENST00000480321 PLEKHH1Q9ULM0 1364 aa16.13■□□□□ 0.17
MCF2L-225ENST00000480321 ABCC11Q96J66 1382 aa16.13■□□□□ 0.17
MCF2L-225ENST00000480321 EIF3JO75822 258 aaKnown RBP16.12■□□□□ 0.17
MCF2L-225ENST00000480321 C1orf115Q9H7X2 142 aa16.12■□□□□ 0.17
MCF2L-225ENST00000480321 ZSCAN25Q6NSZ9 544 aa16.12■□□□□ 0.17
MCF2L-225ENST00000480321 CNNM1Q9NRU3 951 aa16.12■□□□□ 0.17
MCF2L-225ENST00000480321 MAP3K1Q13233 1512 aa16.12■□□□□ 0.17
MCF2L-225ENST00000480321 KIF2AO00139 706 aaPredicted RBP16.12■□□□□ 0.17
MCF2L-225ENST00000480321 PPP1R1BQ9UD71 204 aaPredicted RBP16.12■□□□□ 0.17
MCF2L-225ENST00000480321 CDKL5O76039 1030 aa16.12■□□□□ 0.17
MCF2L-225ENST00000480321 SERPINC1P01008 464 aa16.12■□□□□ 0.17
MCF2L-225ENST00000480321 ZSCAN30Q86W11 494 aa16.12■□□□□ 0.17
MCF2L-225ENST00000480321 PPFIBP1Q86W92 1011 aa16.12■□□□□ 0.17
MCF2L-225ENST00000480321 HDGFL1Q5TGJ6 251 aa16.12■□□□□ 0.17
MCF2L-225ENST00000480321 SLC52A1Q9NWF4 448 aa16.12■□□□□ 0.17
MCF2L-225ENST00000480321 LARP1BQ659C4 914 aaKnown RBP16.11■□□□□ 0.17
MCF2L-225ENST00000480321 TRIM22Q8IYM9 498 aa16.11■□□□□ 0.17
MCF2L-225ENST00000480321 CCDC141Q6ZP82 1450 aa16.11■□□□□ 0.17
MCF2L-225ENST00000480321 IL27Q8NEV9 243 aa16.11■□□□□ 0.17
MCF2L-225ENST00000480321 STIM1Q13586 685 aa16.11■□□□□ 0.17
MCF2L-225ENST00000480321 TTC39AQ5SRH9 613 aa16.11■□□□□ 0.17
MCF2L-225ENST00000480321 CEP57L1Q8IYX8 460 aa16.11■□□□□ 0.17
MCF2L-225ENST00000480321 UQCRHLA0A096LP55 91 aa16.1■□□□□ 0.17
MCF2L-225ENST00000480321 UQCRHP07919 91 aa16.1■□□□□ 0.17
MCF2L-225ENST00000480321 ZFYVE27Q5T4F4 411 aa16.1■□□□□ 0.17
MCF2L-225ENST00000480321 CCAR1Q8IX12 1150 aaKnown RBP16.1■□□□□ 0.17
MCF2L-225ENST00000480321 NUP62CLQ9H1M0 184 aa16.1■□□□□ 0.17
MCF2L-225ENST00000480321 ERLIN2O94905 339 aa16.1■□□□□ 0.17
MCF2L-225ENST00000480321 SMTNL1A8MU46 457 aa16.1■□□□□ 0.17
MCF2L-225ENST00000480321 ALDH1L2Q3SY69 923 aa16.1■□□□□ 0.17
MCF2L-225ENST00000480321 BLOC1S2Q6QNY1 142 aa16.1■□□□□ 0.17
MCF2L-225ENST00000480321 THEMISQ8N1K5 641 aaPredicted RBP16.1■□□□□ 0.17
MCF2L-225ENST00000480321 ATP2B1P20020 1258 aa16.1■□□□□ 0.17
MCF2L-225ENST00000480321 CABP4P57796 275 aa16.1■□□□□ 0.17
MCF2L-225ENST00000480321 IQCEQ6IPM2 695 aa16.1■□□□□ 0.17
MCF2L-225ENST00000480321 SPC24Q8NBT2 197 aa16.1■□□□□ 0.17
MCF2L-225ENST00000480321 CDK5RAP3Q96JB5 506 aa16.1■□□□□ 0.17
MCF2L-225ENST00000480321 GNL3LQ9NVN8 582 aaKnown RBP16.1■□□□□ 0.17
MCF2L-225ENST00000480321 RBM10P98175 930 aaKnown RBP16.09■□□□□ 0.17
MCF2L-225ENST00000480321 PDRG1Q9NUG6 133 aa16.09■□□□□ 0.17
MCF2L-225ENST00000480321 CTNNA3Q9UI47 895 aa16.09■□□□□ 0.17
MCF2L-225ENST00000480321 NAIPQ13075 1403 aa16.09■□□□□ 0.17
MCF2L-225ENST00000480321 DHX29Q7Z478 1369 aaKnown RBP16.09■□□□□ 0.17
MCF2L-225ENST00000480321 TOM1L2Q6ZVM7 507 aa16.09■□□□□ 0.17
MCF2L-225ENST00000480321 SPATA32Q96LK8 384 aa16.09■□□□□ 0.17
MCF2L-225ENST00000480321 NACAP1Q9BZK3 213 aa16.09■□□□□ 0.17
MCF2L-225ENST00000480321 SLC12A5Q9H2X9 1139 aa16.09■□□□□ 0.17
MCF2L-225ENST00000480321 HSP90AB2PQ58FF8 381 aa16.09■□□□□ 0.17
MCF2L-225ENST00000480321 NKTRP30414 1462 aaKnown RBP16.08■□□□□ 0.17
MCF2L-225ENST00000480321 ME1P48163 572 aa16.08■□□□□ 0.17
MCF2L-225ENST00000480321 TAF3Q5VWG9 929 aa16.08■□□□□ 0.17
MCF2L-225ENST00000480321 TMEM132AQ24JP5 1023 aa16.08■□□□□ 0.16
MCF2L-225ENST00000480321 CDK19Q9BWU1 502 aa16.08■□□□□ 0.16
MCF2L-225ENST00000480321 DDX54Q8TDD1 881 aaKnown RBP16.08■□□□□ 0.16
MCF2L-225ENST00000480321 IFT140Q96RY7 1462 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms