RNA–Protein interactions for RNA: ENST00000480222.1

SIK3-209, Transcript of SIK family kinase 3, humanhuman

TSL 3

Gene SIK3, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-209ENST00000480222 FAM208AQ9UK61 1670 aaKnown RBP16.78■□□□□ 0.28
SIK3-209ENST00000480222 YTHDC1Q96MU7 727 aaKnown RBP16.77■□□□□ 0.28
SIK3-209ENST00000480222 ARHGEF25Q86VW2 580 aa16.76■□□□□ 0.27
SIK3-209ENST00000480222 COL18A1P39060 1754 aa16.75■□□□□ 0.27
SIK3-209ENST00000480222 HOXC9P31274 260 aa16.75■□□□□ 0.27
SIK3-209ENST00000480222 ADAMTS8Q9UP79 889 aa16.75■□□□□ 0.27
SIK3-209ENST00000480222 CAMTA1Q9Y6Y1 1673 aa16.75■□□□□ 0.27
SIK3-209ENST00000480222 IL13P35225 146 aa16.74■□□□□ 0.27
SIK3-209ENST00000480222 IP6K1Q92551 441 aa16.74■□□□□ 0.27
SIK3-209ENST00000480222 LMO7Q8WWI1 1683 aa16.74■□□□□ 0.27
SIK3-209ENST00000480222 HNRNPUQ00839 825 aaKnown RBP eCLIP16.73■□□□□ 0.27
SIK3-209ENST00000480222 U2AF1L5P0DN76 240 aaPredicted RBP16.72■□□□□ 0.27
SIK3-209ENST00000480222 U2AF1Q01081 240 aaKnown RBP eCLIP16.72■□□□□ 0.27
SIK3-209ENST00000480222 EIF4A2Q14240 407 aaKnown RBP16.72■□□□□ 0.27
SIK3-209ENST00000480222 HSP90AB2PQ58FF8 381 aa16.72■□□□□ 0.27
SIK3-209ENST00000480222 RGS17Q9UGC6 210 aaPredicted RBP16.72■□□□□ 0.27
SIK3-209ENST00000480222 U2SURPO15042 1029 aaKnown RBP16.71■□□□□ 0.27
SIK3-209ENST00000480222 HAP1P54257 671 aaPredicted RBP16.71■□□□□ 0.27
SIK3-209ENST00000480222 PNNQ9H307 717 aaKnown RBP16.71■□□□□ 0.27
SIK3-209ENST00000480222 KIAA0232Q92628 1395 aa16.71■□□□□ 0.27
SIK3-209ENST00000480222 COL14A1Q05707 1796 aaKnown RBP16.71■□□□□ 0.27
SIK3-209ENST00000480222 ZBED9Q6R2W3 1325 aa16.7■□□□□ 0.26
SIK3-209ENST00000480222 RGPD5Q99666 1765 aa16.7■□□□□ 0.26
SIK3-209ENST00000480222 IGSF1Q8N6C5 1336 aa16.7■□□□□ 0.26
SIK3-209ENST00000480222 KDRP35968 1356 aa16.69■□□□□ 0.26
SIK3-209ENST00000480222 NGEFQ8N5V2 710 aa16.69■□□□□ 0.26
SIK3-209ENST00000480222 CABLES1Q8TDN4 633 aa16.69■□□□□ 0.26
SIK3-209ENST00000480222 NCAPD2Q15021 1401 aa16.69■□□□□ 0.26
SIK3-209ENST00000480222 JCADQ9P266 1359 aa16.68■□□□□ 0.26
SIK3-209ENST00000480222 FCHSD2O94868 740 aa16.68■□□□□ 0.26
SIK3-209ENST00000480222 RUNDC1Q96C34 613 aa16.68■□□□□ 0.26
SIK3-209ENST00000480222 ERBB3P21860 1342 aa16.68■□□□□ 0.26
SIK3-209ENST00000480222 PLEKHG5O94827 1062 aa16.67■□□□□ 0.26
SIK3-209ENST00000480222 ZC3H6P61129 1189 aaKnown RBP16.67■□□□□ 0.26
SIK3-209ENST00000480222 PRDM11Q9NQV5 511 aa16.67■□□□□ 0.26
SIK3-209ENST00000480222 ZBTB7CA1YPR0 619 aa16.66■□□□□ 0.26
SIK3-209ENST00000480222 RSPH6AQ9H0K4 717 aa16.66■□□□□ 0.26
SIK3-209ENST00000480222 MAPK8IP3Q9UPT6 1336 aa16.66■□□□□ 0.26
SIK3-209ENST00000480222 PLCH1Q4KWH8 1693 aa16.65■□□□□ 0.26
SIK3-209ENST00000480222 PLEKHG2Q9H7P9 1386 aa16.65■□□□□ 0.26
SIK3-209ENST00000480222 NEFMP07197 916 aa16.65■□□□□ 0.26
SIK3-209ENST00000480222 CENPBP07199 599 aaPredicted RBP16.65■□□□□ 0.26
SIK3-209ENST00000480222 NCBP3Q53F19 620 aaKnown RBP16.65■□□□□ 0.26
SIK3-209ENST00000480222 COL5A2P05997 1499 aaPredicted RBP16.65■□□□□ 0.26
SIK3-209ENST00000480222 RGPD2P0DJD1 1756 aa16.64■□□□□ 0.25
SIK3-209ENST00000480222 CCDC146Q8IYE0 955 aa16.64■□□□□ 0.25
SIK3-209ENST00000480222 PLEKHF1Q96S99 279 aa16.64■□□□□ 0.25
SIK3-209ENST00000480222 NWD2Q9ULI1 1742 aa16.64■□□□□ 0.25
SIK3-209ENST00000480222 PRKAR2BP31323 418 aa16.63■□□□□ 0.25
SIK3-209ENST00000480222 ANKRD24Q8TF21 1146 aa16.63■□□□□ 0.25
SIK3-209ENST00000480222 EYA1Q99502 592 aa16.62■□□□□ 0.25
SIK3-209ENST00000480222 SPATA31A6Q5VVP1 1343 aa16.62■□□□□ 0.25
SIK3-209ENST00000480222 HMOX1P09601 288 aa16.61■□□□□ 0.25
SIK3-209ENST00000480222 SULT6B1Q6IMI4 303 aa16.61■□□□□ 0.25
SIK3-209ENST00000480222 POTEAQ6S8J7 498 aa16.61■□□□□ 0.25
SIK3-209ENST00000480222 AXIN2Q9Y2T1 843 aa16.61■□□□□ 0.25
SIK3-209ENST00000480222 NRAPQ86VF7 1730 aa16.61■□□□□ 0.25
SIK3-209ENST00000480222 APAF1O14727 1248 aa16.6■□□□□ 0.25
SIK3-209ENST00000480222 CHRNA2Q15822 529 aa16.6■□□□□ 0.25
SIK3-209ENST00000480222 LTV1Q96GA3 475 aaPredicted RBP16.6■□□□□ 0.25
SIK3-209ENST00000480222 AEBP1Q8IUX7 1158 aa16.59■□□□□ 0.25
SIK3-209ENST00000480222 TCP11L2Q8N4U5 519 aa16.59■□□□□ 0.25
SIK3-209ENST00000480222 WDR17Q8IZU2 1322 aa16.59■□□□□ 0.25
SIK3-209ENST00000480222 PARP4Q9UKK3 1724 aaKnown RBP16.59■□□□□ 0.25
SIK3-209ENST00000480222 CCDC27Q2M243 656 aa16.58■□□□□ 0.24
SIK3-209ENST00000480222 ZNF521Q96K83 1311 aa16.57■□□□□ 0.24
SIK3-209ENST00000480222 PDE3BQ13370 1112 aa16.57■□□□□ 0.24
SIK3-209ENST00000480222 NBPF6Q5VWK0 638 aa16.57■□□□□ 0.24
SIK3-209ENST00000480222 NBPF4Q96M43 638 aa16.57■□□□□ 0.24
SIK3-209ENST00000480222 DLG5Q8TDM6 1919 aa16.57■□□□□ 0.24
SIK3-209ENST00000480222 CRB1P82279 1406 aa16.56■□□□□ 0.24
SIK3-209ENST00000480222 CSB-PGBD3P0DP91 1061 aa16.56■□□□□ 0.24
SIK3-209ENST00000480222 PKD1L3Q7Z443 1732 aa16.56■□□□□ 0.24
SIK3-209ENST00000480222 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.56■□□□□ 0.24
SIK3-209ENST00000480222 SLIT2O94813 1529 aa16.55■□□□□ 0.24
SIK3-209ENST00000480222 WNK3Q9BYP7 1800 aa16.55■□□□□ 0.24
SIK3-209ENST00000480222 FAM83GA6ND36 823 aa16.55■□□□□ 0.24
SIK3-209ENST00000480222 TMPOP42166 694 aaKnown RBP16.55■□□□□ 0.24
SIK3-209ENST00000480222 NFE2L2Q16236 605 aa16.55■□□□□ 0.24
SIK3-209ENST00000480222 LRP6O75581 1613 aa16.55■□□□□ 0.24
SIK3-209ENST00000480222 LMOD3Q0VAK6 560 aa16.54■□□□□ 0.24
SIK3-209ENST00000480222 GAS2L2Q8NHY3 880 aa16.53■□□□□ 0.24
SIK3-209ENST00000480222 PHACTR3Q96KR7 559 aa16.53■□□□□ 0.24
SIK3-209ENST00000480222 NLRP2Q9NX02 1062 aa16.53■□□□□ 0.24
SIK3-209ENST00000480222 LRRC37A3O60309 1634 aa16.52■□□□□ 0.24
SIK3-209ENST00000480222 USHBP1Q8N6Y0 703 aa16.52■□□□□ 0.24
SIK3-209ENST00000480222 BTG4Q9NY30 223 aa16.52■□□□□ 0.24
SIK3-209ENST00000480222 MEGF6O75095 1541 aa16.51■□□□□ 0.23
SIK3-209ENST00000480222 NUTM2BA6NNL0 878 aaPredicted RBP16.51■□□□□ 0.23
SIK3-209ENST00000480222 NUTM2EB1AL46 878 aaPredicted RBP16.51■□□□□ 0.23
SIK3-209ENST00000480222 ADAMTS2O95450 1211 aa16.51■□□□□ 0.23
SIK3-209ENST00000480222 TOM1L2Q6ZVM7 507 aa16.51■□□□□ 0.23
SIK3-209ENST00000480222 NUTM2AQ8IVF1 878 aaPredicted RBP16.51■□□□□ 0.23
SIK3-209ENST00000480222 WWC1Q8IX03 1113 aa16.51■□□□□ 0.23
SIK3-209ENST00000480222 CARD10Q9BWT7 1032 aa16.51■□□□□ 0.23
SIK3-209ENST00000480222 RRP7AQ9Y3A4 280 aaKnown RBP16.51■□□□□ 0.23
SIK3-209ENST00000480222 SALL2Q9Y467 1007 aaPredicted RBP16.51■□□□□ 0.23
SIK3-209ENST00000480222 OVOS2A0A0G2JMS6 1433 aa16.51■□□□□ 0.23
SIK3-209ENST00000480222 RIPK4P57078 832 aa16.5■□□□□ 0.23
SIK3-209ENST00000480222 EVA1CP58658 441 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms