RNA–Protein interactions for RNA: ENST00000480181.1

CLIC3-202, Transcript of chloride intracellular channel 3, humanhuman

TSL 3

Gene CLIC3, Length 794 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC3-202ENST00000480181 PIK3C2AO00443 1686 aa29.62■■■□□ 2.33
CLIC3-202ENST00000480181 CPSF1Q10570 1443 aaKnown RBP29.62■■■□□ 2.33
CLIC3-202ENST00000480181 ARHGEF25Q86VW2 580 aa29.61■■■□□ 2.33
CLIC3-202ENST00000480181 PPP1R1BQ9UD71 204 aaPredicted RBP29.61■■■□□ 2.33
CLIC3-202ENST00000480181 RGPD3A6NKT7 1758 aaPredicted RBP29.61■■■□□ 2.33
CLIC3-202ENST00000480181 RGPD4Q7Z3J3 1758 aa29.61■■■□□ 2.33
CLIC3-202ENST00000480181 PEAK1Q9H792 1746 aa29.6■■■□□ 2.33
CLIC3-202ENST00000480181 DCAF8L1A6NGE4 600 aa29.59■■■□□ 2.33
CLIC3-202ENST00000480181 KCNQ2O43526 872 aa29.59■■■□□ 2.33
CLIC3-202ENST00000480181 LRRC37A3O60309 1634 aa29.59■■■□□ 2.33
CLIC3-202ENST00000480181 COL18A1P39060 1754 aa29.59■■■□□ 2.33
CLIC3-202ENST00000480181 BCL9O00512 1426 aa29.58■■■□□ 2.33
CLIC3-202ENST00000480181 CSB-PGBD3P0DP91 1061 aa29.58■■■□□ 2.33
CLIC3-202ENST00000480181 CARD10Q9BWT7 1032 aa29.58■■■□□ 2.33
CLIC3-202ENST00000480181 AXIN2Q9Y2T1 843 aa29.58■■■□□ 2.33
CLIC3-202ENST00000480181 KTN1Q86UP2 1357 aaKnown RBP29.54■■■□□ 2.32
CLIC3-202ENST00000480181 SBF2Q86WG5 1849 aa29.54■■■□□ 2.32
CLIC3-202ENST00000480181 AKAP12Q02952 1782 aa29.54■■■□□ 2.32
CLIC3-202ENST00000480181 EXOC5O00471 708 aa29.53■■■□□ 2.32
CLIC3-202ENST00000480181 ABCC6O95255 1503 aa29.53■■■□□ 2.32
CLIC3-202ENST00000480181 CCDC7Q96M83 1385 aa29.52■■■□□ 2.32
CLIC3-202ENST00000480181 NINLQ9Y2I6 1382 aa29.52■■■□□ 2.32
CLIC3-202ENST00000480181 NEUROD1Q13562 356 aa29.52■■■□□ 2.32
CLIC3-202ENST00000480181 MARCH10Q8NA82 808 aaPredicted RBP29.52■■■□□ 2.32
CLIC3-202ENST00000480181 SIN3AQ96ST3 1273 aa29.52■■■□□ 2.32
CLIC3-202ENST00000480181 WNK3Q9BYP7 1800 aa29.52■■■□□ 2.32
CLIC3-202ENST00000480181 SOX12O15370 315 aa29.5■■■□□ 2.31
CLIC3-202ENST00000480181 SBNO2Q9Y2G9 1366 aa29.49■■■□□ 2.31
CLIC3-202ENST00000480181 NFAT5O94916 1531 aa29.46■■■□□ 2.31
CLIC3-202ENST00000480181 YY1P25490 414 aa29.45■■■□□ 2.31
CLIC3-202ENST00000480181 USP31Q70CQ4 1352 aa29.44■■■□□ 2.3
CLIC3-202ENST00000480181 RGPD5Q99666 1765 aa29.44■■■□□ 2.3
CLIC3-202ENST00000480181 STK32BQ9NY57 414 aa29.43■■■□□ 2.3
CLIC3-202ENST00000480181 HDGFL2Q7Z4V5 671 aaPredicted RBP29.42■■■□□ 2.3
CLIC3-202ENST00000480181 ANO8Q9HCE9 1232 aaPredicted RBP29.42■■■□□ 2.3
CLIC3-202ENST00000480181 PTF1AQ7RTS3 328 aa29.41■■■□□ 2.3
CLIC3-202ENST00000480181 MON2Q7Z3U7 1717 aa29.41■■■□□ 2.3
CLIC3-202ENST00000480181 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.41■■■□□ 2.3
CLIC3-202ENST00000480181 PROM2Q8N271 834 aa29.41■■■□□ 2.3
CLIC3-202ENST00000480181 TNS2Q63HR2 1409 aa29.4■■■□□ 2.3
CLIC3-202ENST00000480181 TXNRD1Q16881 649 aa29.4■■■□□ 2.3
CLIC3-202ENST00000480181 CARD11Q9BXL7 1154 aa29.39■■■□□ 2.3
CLIC3-202ENST00000480181 CASZ1Q86V15 1759 aa29.37■■■□□ 2.29
CLIC3-202ENST00000480181 TMC1Q8TDI8 760 aa29.37■■■□□ 2.29
CLIC3-202ENST00000480181 NLRP2Q9NX02 1062 aa29.37■■■□□ 2.29
CLIC3-202ENST00000480181 ERBB3P21860 1342 aa29.37■■■□□ 2.29
CLIC3-202ENST00000480181 USP54Q70EL1 1684 aa29.37■■■□□ 2.29
CLIC3-202ENST00000480181 PUS7Q96PZ0 661 aaKnown RBP29.36■■■□□ 2.29
CLIC3-202ENST00000480181 TERF2IPQ9NYB0 399 aa29.36■■■□□ 2.29
CLIC3-202ENST00000480181 IL2RBP14784 551 aa29.35■■■□□ 2.29
CLIC3-202ENST00000480181 SLC15A2Q16348 729 aa29.35■■■□□ 2.29
CLIC3-202ENST00000480181 PCGF6Q9BYE7 350 aa29.34■■■□□ 2.29
CLIC3-202ENST00000480181 NME9Q86XW9 330 aa29.33■■■□□ 2.29
CLIC3-202ENST00000480181 EDC4Q6P2E9 1401 aaKnown RBP29.33■■■□□ 2.29
CLIC3-202ENST00000480181 ZBTB7AO95365 584 aa29.32■■■□□ 2.28
CLIC3-202ENST00000480181 CD163L1Q9NR16 1453 aa29.3■■■□□ 2.28
CLIC3-202ENST00000480181 SLC24A1O60721 1099 aa29.3■■■□□ 2.28
CLIC3-202ENST00000480181 ANKRD24Q8TF21 1146 aa29.3■■■□□ 2.28
CLIC3-202ENST00000480181 NHSQ6T4R5 1651 aa29.3■■■□□ 2.28
CLIC3-202ENST00000480181 MTFR1LQ9H019 292 aa29.29■■■□□ 2.28
CLIC3-202ENST00000480181 SLC12A5Q9H2X9 1139 aa29.29■■■□□ 2.28
CLIC3-202ENST00000480181 LTN1O94822 1766 aa29.28■■■□□ 2.28
CLIC3-202ENST00000480181 PTGER2P43116 358 aa29.27■■■□□ 2.28
CLIC3-202ENST00000480181 PDGFDQ9GZP0 370 aaPredicted RBP29.27■■■□□ 2.28
CLIC3-202ENST00000480181 ATF5Q9Y2D1 282 aaPredicted RBP29.27■■■□□ 2.28
CLIC3-202ENST00000480181 ACSBG1Q96GR2 724 aa29.26■■■□□ 2.27
CLIC3-202ENST00000480181 TONSLQ96HA7 1378 aa29.26■■■□□ 2.27
CLIC3-202ENST00000480181 IP6K1Q92551 441 aa29.22■■■□□ 2.27
CLIC3-202ENST00000480181 A0A1W2PP64 1363 aa29.22■■■□□ 2.27
CLIC3-202ENST00000480181 MYOM1P52179 1685 aa29.2■■■□□ 2.26
CLIC3-202ENST00000480181 SYT17Q9BSW7 474 aa29.18■■■□□ 2.26
CLIC3-202ENST00000480181 SLC27A3Q5K4L6 730 aa29.17■■■□□ 2.26
CLIC3-202ENST00000480181 COG3Q96JB2 828 aa29.17■■■□□ 2.26
CLIC3-202ENST00000480181 FHDC1Q9C0D6 1143 aaPredicted RBP29.17■■■□□ 2.26
CLIC3-202ENST00000480181 FAM208AQ9UK61 1670 aaKnown RBP29.17■■■□□ 2.26
CLIC3-202ENST00000480181 BTAF1O14981 1849 aa29.15■■■□□ 2.26
CLIC3-202ENST00000480181 ARXQ96QS3 562 aa29.15■■■□□ 2.26
CLIC3-202ENST00000480181 SGIP1Q9BQI5 828 aa29.15■■■□□ 2.26
CLIC3-202ENST00000480181 KAT6BQ8WYB5 2073 aa29.15■■■□□ 2.26
CLIC3-202ENST00000480181 DDX54Q8TDD1 881 aaKnown RBP29.14■■■□□ 2.26
CLIC3-202ENST00000480181 PAPPAQ13219 1627 aa29.13■■■□□ 2.25
CLIC3-202ENST00000480181 SLC16A10Q8TF71 515 aa29.13■■■□□ 2.25
CLIC3-202ENST00000480181 AMPHP49418 695 aa29.12■■■□□ 2.25
CLIC3-202ENST00000480181 LTV1Q96GA3 475 aaPredicted RBP29.12■■■□□ 2.25
CLIC3-202ENST00000480181 MAP3K5Q99683 1374 aa29.11■■■□□ 2.25
CLIC3-202ENST00000480181 TESK2Q96S53 571 aa29.09■■■□□ 2.25
CLIC3-202ENST00000480181 ST20-MTHFSA0A0A6YYL1 179 aa29.08■■■□□ 2.25
CLIC3-202ENST00000480181 HOXC9P31274 260 aa29.08■■■□□ 2.25
CLIC3-202ENST00000480181 LRRC4BQ9NT99 713 aa29.08■■■□□ 2.25
CLIC3-202ENST00000480181 ZNF827Q17R98 1081 aa29.07■■■□□ 2.24
CLIC3-202ENST00000480181 MAP3K19Q56UN5 1328 aa29.07■■■□□ 2.24
CLIC3-202ENST00000480181 ANKRD36BQ8N2N9 1353 aa29.06■■■□□ 2.24
CLIC3-202ENST00000480181 POLD1P28340 1107 aa29.06■■■□□ 2.24
CLIC3-202ENST00000480181 AKT1S1Q96B36 256 aa29.06■■■□□ 2.24
CLIC3-202ENST00000480181 RTL1A6NKG5 1358 aa29.05■■■□□ 2.24
CLIC3-202ENST00000480181 HMGB2P26583 209 aaKnown RBP29.05■■■□□ 2.24
CLIC3-202ENST00000480181 ZCRB1Q8TBF4 217 aaKnown RBP29.05■■■□□ 2.24
CLIC3-202ENST00000480181 SYTL4Q96C24 671 aaPredicted RBP29.05■■■□□ 2.24
CLIC3-202ENST00000480181 CGNL1Q0VF96 1302 aa29.04■■■□□ 2.24
CLIC3-202ENST00000480181 UTRNP46939 3433 aa29.03■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms