RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 QTRT2Q9H974 415 aaKnown RBP26.97■■□□□ 1.91
LIME1-205ENST00000480139 MAP3K19Q56UN5 1328 aa26.96■■□□□ 1.91
LIME1-205ENST00000480139 MAP2P11137 1827 aaKnown RBP26.96■■□□□ 1.91
LIME1-205ENST00000480139 ZBTB7CA1YPR0 619 aa26.96■■□□□ 1.91
LIME1-205ENST00000480139 VPS72Q15906 364 aa26.96■■□□□ 1.91
LIME1-205ENST00000480139 BLMP54132 1417 aaPredicted RBP26.96■■□□□ 1.91
LIME1-205ENST00000480139 MORC1Q86VD1 984 aa26.94■■□□□ 1.9
LIME1-205ENST00000480139 AXIN2Q9Y2T1 843 aa26.94■■□□□ 1.9
LIME1-205ENST00000480139 PEAK1Q9H792 1746 aa26.93■■□□□ 1.9
LIME1-205ENST00000480139 IP6K1Q92551 441 aa26.93■■□□□ 1.9
LIME1-205ENST00000480139 GLI3P10071 1580 aa26.92■■□□□ 1.9
LIME1-205ENST00000480139 FBLN1P23142 703 aa26.92■■□□□ 1.9
LIME1-205ENST00000480139 RBM6P78332 1123 aaKnown RBP26.91■■□□□ 1.9
LIME1-205ENST00000480139 RRS1Q15050 365 aaKnown RBP26.91■■□□□ 1.9
LIME1-205ENST00000480139 FAM208AQ9UK61 1670 aaKnown RBP26.91■■□□□ 1.9
LIME1-205ENST00000480139 SMG6Q86US8 1419 aaKnown RBP26.9■■□□□ 1.9
LIME1-205ENST00000480139 CDK12Q9NYV4 1490 aaPredicted RBP26.9■■□□□ 1.9
LIME1-205ENST00000480139 FLT4P35916 1363 aa26.9■■□□□ 1.9
LIME1-205ENST00000480139 EVA1CP58658 441 aa26.9■■□□□ 1.9
LIME1-205ENST00000480139 DDX10Q13206 875 aaKnown RBP26.9■■□□□ 1.9
LIME1-205ENST00000480139 GJD4Q96KN9 370 aaPredicted RBP26.9■■□□□ 1.9
LIME1-205ENST00000480139 RXRBP28702 533 aa26.89■■□□□ 1.9
LIME1-205ENST00000480139 HOXC9P31274 260 aa26.89■■□□□ 1.9
LIME1-205ENST00000480139 AMPHP49418 695 aa26.89■■□□□ 1.9
LIME1-205ENST00000480139 CC2D1BQ5T0F9 858 aaKnown RBP26.89■■□□□ 1.9
LIME1-205ENST00000480139 STRN4Q9NRL3 753 aa26.89■■□□□ 1.9
LIME1-205ENST00000480139 WDR17Q8IZU2 1322 aa26.89■■□□□ 1.89
LIME1-205ENST00000480139 CRB1P82279 1406 aa26.88■■□□□ 1.89
LIME1-205ENST00000480139 ERBB3P21860 1342 aa26.88■■□□□ 1.89
LIME1-205ENST00000480139 SPATA31A5Q5VU36 1347 aa26.88■■□□□ 1.89
LIME1-205ENST00000480139 SPATA31A7Q8IWB4 1347 aa26.88■■□□□ 1.89
LIME1-205ENST00000480139 POLKQ9UBT6 870 aa26.87■■□□□ 1.89
LIME1-205ENST00000480139 LARP1Q6PKG0 1096 aaKnown RBP26.86■■□□□ 1.89
LIME1-205ENST00000480139 EMILIN1Q9Y6C2 1016 aa26.86■■□□□ 1.89
LIME1-205ENST00000480139 INSRP06213 1382 aa26.85■■□□□ 1.89
LIME1-205ENST00000480139 TNNT2P45379 298 aaPredicted RBP26.85■■□□□ 1.89
LIME1-205ENST00000480139 SPATA31A1Q5TZJ5 1347 aa26.85■■□□□ 1.89
LIME1-205ENST00000480139 CCDC9Q9Y3X0 531 aaKnown RBP26.84■■□□□ 1.89
LIME1-205ENST00000480139 ANKRD24Q8TF21 1146 aa26.82■■□□□ 1.88
LIME1-205ENST00000480139 WNK3Q9BYP7 1800 aa26.81■■□□□ 1.88
LIME1-205ENST00000480139 THSD7AQ9UPZ6 1657 aa26.8■■□□□ 1.88
LIME1-205ENST00000480139 ONECUT3O60422 494 aaPredicted RBP26.8■■□□□ 1.88
LIME1-205ENST00000480139 CSB-PGBD3P0DP91 1061 aa26.8■■□□□ 1.88
LIME1-205ENST00000480139 TOM1L2Q6ZVM7 507 aa26.8■■□□□ 1.88
LIME1-205ENST00000480139 THRAP3Q9Y2W1 955 aaKnown RBP26.8■■□□□ 1.88
LIME1-205ENST00000480139 RGS12O14924 1447 aa26.8■■□□□ 1.88
LIME1-205ENST00000480139 HSP90AB2PQ58FF8 381 aa26.79■■□□□ 1.88
LIME1-205ENST00000480139 CARD10Q9BWT7 1032 aa26.79■■□□□ 1.88
LIME1-205ENST00000480139 PARD3Q8TEW0 1356 aa26.78■■□□□ 1.88
LIME1-205ENST00000480139 PPM1GO15355 546 aaPredicted RBP26.77■■□□□ 1.88
LIME1-205ENST00000480139 BARGINQ6ZT62 677 aa26.77■■□□□ 1.88
LIME1-205ENST00000480139 TCP11L2Q8N4U5 519 aa26.77■■□□□ 1.88
LIME1-205ENST00000480139 RGPD2P0DJD1 1756 aa26.76■■□□□ 1.87
LIME1-205ENST00000480139 PARP4Q9UKK3 1724 aaKnown RBP26.74■■□□□ 1.87
LIME1-205ENST00000480139 CNGB1Q14028 1251 aaPredicted RBP26.74■■□□□ 1.87
LIME1-205ENST00000480139 FAM98CQ17RN3 349 aaKnown RBP26.73■■□□□ 1.87
LIME1-205ENST00000480139 LTV1Q96GA3 475 aaPredicted RBP26.73■■□□□ 1.87
LIME1-205ENST00000480139 NLRP2Q9NX02 1062 aa26.73■■□□□ 1.87
LIME1-205ENST00000480139 USP35Q9P2H5 1018 aa26.73■■□□□ 1.87
LIME1-205ENST00000480139 MTHFSP49914 203 aa26.72■■□□□ 1.87
LIME1-205ENST00000480139 ILDR2Q71H61 639 aa26.72■■□□□ 1.87
LIME1-205ENST00000480139 DISP2A7MBM2 1401 aa26.71■■□□□ 1.87
LIME1-205ENST00000480139 BRWD3Q6RI45 1802 aa26.7■■□□□ 1.87
LIME1-205ENST00000480139 RALBP1Q15311 655 aa26.7■■□□□ 1.86
LIME1-205ENST00000480139 NCAPD2Q15021 1401 aa26.7■■□□□ 1.86
LIME1-205ENST00000480139 PPP2R1AP30153 589 aa26.69■■□□□ 1.86
LIME1-205ENST00000480139 SEPT12Q8IYM1 358 aa26.69■■□□□ 1.86
LIME1-205ENST00000480139 CDCA7Q9BWT1 371 aaPredicted RBP26.69■■□□□ 1.86
LIME1-205ENST00000480139 EIF4A2Q14240 407 aaKnown RBP26.68■■□□□ 1.86
LIME1-205ENST00000480139 LRRC37A3O60309 1634 aa26.68■■□□□ 1.86
LIME1-205ENST00000480139 NBPF6Q5VWK0 638 aa26.67■■□□□ 1.86
LIME1-205ENST00000480139 NBPF4Q96M43 638 aa26.67■■□□□ 1.86
LIME1-205ENST00000480139 RGPD1P0DJD0 1748 aa26.67■■□□□ 1.86
LIME1-205ENST00000480139 COL3A1P02461 1466 aaPredicted RBP26.67■■□□□ 1.86
LIME1-205ENST00000480139 A0A0G2JS52 829 aa26.62■■□□□ 1.85
LIME1-205ENST00000480139 IL2RBP14784 551 aa26.62■■□□□ 1.85
LIME1-205ENST00000480139 MYT1Q01538 1121 aa26.62■■□□□ 1.85
LIME1-205ENST00000480139 IGSF1Q8N6C5 1336 aa26.62■■□□□ 1.85
LIME1-205ENST00000480139 IL13P35225 146 aa26.61■■□□□ 1.85
LIME1-205ENST00000480139 EYA1Q99502 592 aa26.61■■□□□ 1.85
LIME1-205ENST00000480139 PRKRIP1Q9H875 184 aaPredicted RBP26.61■■□□□ 1.85
LIME1-205ENST00000480139 CFAP53Q96M91 514 aa26.6■■□□□ 1.85
LIME1-205ENST00000480139 PLEKHG2Q9H7P9 1386 aa26.59■■□□□ 1.85
LIME1-205ENST00000480139 TNS2Q63HR2 1409 aa26.59■■□□□ 1.85
LIME1-205ENST00000480139 MYBBP1AQ9BQG0 1328 aaKnown RBP26.59■■□□□ 1.85
LIME1-205ENST00000480139 DIAPH1O60610 1272 aaKnown RBP26.58■■□□□ 1.85
LIME1-205ENST00000480139 KRT27Q7Z3Y8 459 aa26.58■■□□□ 1.85
LIME1-205ENST00000480139 USHBP1Q8N6Y0 703 aa26.58■■□□□ 1.85
LIME1-205ENST00000480139 MEGF6O75095 1541 aa26.58■■□□□ 1.85
LIME1-205ENST00000480139 OVOS2A0A0G2JMS6 1433 aa26.57■■□□□ 1.84
LIME1-205ENST00000480139 DDB1Q16531 1140 aa26.57■■□□□ 1.84
LIME1-205ENST00000480139 RAPGEF4Q8WZA2 1011 aa26.55■■□□□ 1.84
LIME1-205ENST00000480139 PKD1L3Q7Z443 1732 aa26.55■■□□□ 1.84
LIME1-205ENST00000480139 KDRP35968 1356 aa26.55■■□□□ 1.84
LIME1-205ENST00000480139 SHANK3Q9BYB0 1731 aa26.54■■□□□ 1.84
LIME1-205ENST00000480139 EXOC5O00471 708 aa26.53■■□□□ 1.84
LIME1-205ENST00000480139 PDE3BQ13370 1112 aa26.53■■□□□ 1.84
LIME1-205ENST00000480139 TATP17735 454 aaPredicted RBP26.52■■□□□ 1.84
LIME1-205ENST00000480139 BCL9O00512 1426 aa26.48■■□□□ 1.83
LIME1-205ENST00000480139 NUDCQ9Y266 331 aa26.48■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms