RNA–Protein interactions for RNA: ENST00000480067.1

CLDN11-205, Transcript of claudin 11, humanhuman

TSL 1 (best)

Gene CLDN11, Length 1,589 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-205ENST00000480067 CRYBG1Q9Y4K1 1723 aa15.08■□□□□ 0
CLDN11-205ENST00000480067 MSH5O43196 834 aa15.07■□□□□ 0
CLDN11-205ENST00000480067 FLT4P35916 1363 aa15.07■□□□□ 0
CLDN11-205ENST00000480067 ABCA3Q99758 1704 aa15.07■□□□□ 0
CLDN11-205ENST00000480067 RTL1A6NKG5 1358 aa15.07■□□□□ 0
CLDN11-205ENST00000480067 FNBP4Q8N3X1 1017 aaPredicted RBP15.07■□□□□ 0
CLDN11-205ENST00000480067 CFAP53Q96M91 514 aa15.07■□□□□ 0
CLDN11-205ENST00000480067 LTV1Q96GA3 475 aaPredicted RBP15.06■□□□□ 0
CLDN11-205ENST00000480067 CSB-PGBD3P0DP91 1061 aa15.05■□□□□ -0
CLDN11-205ENST00000480067 STRN4Q9NRL3 753 aa15.05■□□□□ -0
CLDN11-205ENST00000480067 INSRP06213 1382 aa15.04■□□□□ -0
CLDN11-205ENST00000480067 AFF2P51816 1311 aa15.04■□□□□ -0
CLDN11-205ENST00000480067 UNC5CLQ8IV45 518 aa15.04■□□□□ -0
CLDN11-205ENST00000480067 ANKRD24Q8TF21 1146 aa15.04■□□□□ -0
CLDN11-205ENST00000480067 USP21Q9UK80 565 aa15.04■□□□□ -0
CLDN11-205ENST00000480067 BLMP54132 1417 aaPredicted RBP15.04■□□□□ -0
CLDN11-205ENST00000480067 SMG6Q86US8 1419 aaKnown RBP15.03■□□□□ -0
CLDN11-205ENST00000480067 MAP2P11137 1827 aaKnown RBP15.03■□□□□ -0
CLDN11-205ENST00000480067 CAMTA1Q9Y6Y1 1673 aa15.02■□□□□ -0
CLDN11-205ENST00000480067 COL14A1Q05707 1796 aaKnown RBP15.02□□□□□ -0.01
CLDN11-205ENST00000480067 ERBB3P21860 1342 aa15.02□□□□□ -0.01
CLDN11-205ENST00000480067 CDK12Q9NYV4 1490 aaPredicted RBP15.02□□□□□ -0.01
CLDN11-205ENST00000480067 DIAPH1O60610 1272 aaKnown RBP15.02□□□□□ -0.01
CLDN11-205ENST00000480067 LTN1O94822 1766 aa15.01□□□□□ -0.01
CLDN11-205ENST00000480067 SLIT2O94813 1529 aa15.01□□□□□ -0.01
CLDN11-205ENST00000480067 ABCC6O95255 1503 aa15.01□□□□□ -0.01
CLDN11-205ENST00000480067 EIF4A2Q14240 407 aaKnown RBP15.01□□□□□ -0.01
CLDN11-205ENST00000480067 LARP1Q6PKG0 1096 aaKnown RBP15.01□□□□□ -0.01
CLDN11-205ENST00000480067 TOM1L2Q6ZVM7 507 aa15.01□□□□□ -0.01
CLDN11-205ENST00000480067 MIER1Q8N108 512 aa15.01□□□□□ -0.01
CLDN11-205ENST00000480067 NLRP2Q9NX02 1062 aa15.01□□□□□ -0.01
CLDN11-205ENST00000480067 CCDC9Q9Y3X0 531 aaKnown RBP15.01□□□□□ -0.01
CLDN11-205ENST00000480067 WDR17Q8IZU2 1322 aa15□□□□□ -0.01
CLDN11-205ENST00000480067 ZNF772Q68DY9 489 aaPredicted RBP15□□□□□ -0.01
CLDN11-205ENST00000480067 NUDCQ9Y266 331 aa15□□□□□ -0.01
CLDN11-205ENST00000480067 BCL9LQ86UU0 1499 aa15□□□□□ -0.01
CLDN11-205ENST00000480067 IL13P35225 146 aa14.99□□□□□ -0.01
CLDN11-205ENST00000480067 COL5A2P05997 1499 aaPredicted RBP14.99□□□□□ -0.01
CLDN11-205ENST00000480067 PEAK1Q9H792 1746 aa14.99□□□□□ -0.01
CLDN11-205ENST00000480067 QTRT2Q9H974 415 aaKnown RBP14.98□□□□□ -0.01
CLDN11-205ENST00000480067 MRS2Q9HD23 443 aa14.98□□□□□ -0.01
CLDN11-205ENST00000480067 USP35Q9P2H5 1018 aa14.98□□□□□ -0.01
CLDN11-205ENST00000480067 TRPC5Q9UL62 973 aaPredicted RBP14.98□□□□□ -0.01
CLDN11-205ENST00000480067 LMO7Q8WWI1 1683 aa14.98□□□□□ -0.01
CLDN11-205ENST00000480067 COL18A1P39060 1754 aa14.98□□□□□ -0.01
CLDN11-205ENST00000480067 U2SURPO15042 1029 aaKnown RBP14.98□□□□□ -0.01
CLDN11-205ENST00000480067 VPS72Q15906 364 aa14.98□□□□□ -0.01
CLDN11-205ENST00000480067 NBPF6Q5VWK0 638 aa14.98□□□□□ -0.01
CLDN11-205ENST00000480067 NBPF4Q96M43 638 aa14.98□□□□□ -0.01
CLDN11-205ENST00000480067 EYA1Q99502 592 aa14.98□□□□□ -0.01
CLDN11-205ENST00000480067 CARD10Q9BWT7 1032 aa14.97□□□□□ -0.01
CLDN11-205ENST00000480067 CCDC184Q52MB2 194 aa14.96□□□□□ -0.01
CLDN11-205ENST00000480067 CRB1P82279 1406 aa14.96□□□□□ -0.02
CLDN11-205ENST00000480067 CCER2I3L3R5 266 aa14.95□□□□□ -0.02
CLDN11-205ENST00000480067 U2AF1L5P0DN76 240 aaPredicted RBP14.95□□□□□ -0.02
CLDN11-205ENST00000480067 U2AF1Q01081 240 aaKnown RBP eCLIP14.95□□□□□ -0.02
CLDN11-205ENST00000480067 PLCH1Q4KWH8 1693 aa14.95□□□□□ -0.02
CLDN11-205ENST00000480067 SPATA31A5Q5VU36 1347 aa14.95□□□□□ -0.02
CLDN11-205ENST00000480067 SPATA31A7Q8IWB4 1347 aa14.95□□□□□ -0.02
CLDN11-205ENST00000480067 NWD2Q9ULI1 1742 aa14.95□□□□□ -0.02
CLDN11-205ENST00000480067 WDR43Q15061 677 aaKnown RBP eCLIP14.94□□□□□ -0.02
CLDN11-205ENST00000480067 TCP11L2Q8N4U5 519 aa14.94□□□□□ -0.02
CLDN11-205ENST00000480067 USHBP1Q8N6Y0 703 aa14.94□□□□□ -0.02
CLDN11-205ENST00000480067 GJD4Q96KN9 370 aaPredicted RBP14.94□□□□□ -0.02
CLDN11-205ENST00000480067 SPATA31A1Q5TZJ5 1347 aa14.94□□□□□ -0.02
CLDN11-205ENST00000480067 SULT6B1Q6IMI4 303 aa14.94□□□□□ -0.02
CLDN11-205ENST00000480067 RGS17Q9UGC6 210 aaPredicted RBP14.94□□□□□ -0.02
CLDN11-205ENST00000480067 COL3A1P02461 1466 aaPredicted RBP14.93□□□□□ -0.02
CLDN11-205ENST00000480067 RGPD5Q99666 1765 aa14.93□□□□□ -0.02
CLDN11-205ENST00000480067 THRAP3Q9Y2W1 955 aaKnown RBP14.93□□□□□ -0.02
CLDN11-205ENST00000480067 IGSF1Q8N6C5 1336 aa14.93□□□□□ -0.02
CLDN11-205ENST00000480067 HMOX1P09601 288 aa14.92□□□□□ -0.02
CLDN11-205ENST00000480067 POTEDQ86YR6 584 aa14.92□□□□□ -0.02
CLDN11-205ENST00000480067 ATRNO75882 1429 aa14.91□□□□□ -0.02
CLDN11-205ENST00000480067 PNISRQ8TF01 805 aaKnown RBP14.91□□□□□ -0.02
CLDN11-205ENST00000480067 RAPGEF4Q8WZA2 1011 aa14.91□□□□□ -0.02
CLDN11-205ENST00000480067 RXRBP28702 533 aa14.9□□□□□ -0.02
CLDN11-205ENST00000480067 RBM6P78332 1123 aaKnown RBP14.9□□□□□ -0.02
CLDN11-205ENST00000480067 FAM98CQ17RN3 349 aaKnown RBP14.9□□□□□ -0.02
CLDN11-205ENST00000480067 AEBP1Q8IUX7 1158 aa14.9□□□□□ -0.02
CLDN11-205ENST00000480067 NRAPQ86VF7 1730 aa14.9□□□□□ -0.02
CLDN11-205ENST00000480067 FCHSD2O94868 740 aa14.9□□□□□ -0.02
CLDN11-205ENST00000480067 IL2RBP14784 551 aa14.9□□□□□ -0.02
CLDN11-205ENST00000480067 BARGINQ6ZT62 677 aa14.9□□□□□ -0.02
CLDN11-205ENST00000480067 PNNQ9H307 717 aaKnown RBP14.9□□□□□ -0.02
CLDN11-205ENST00000480067 ADAMTS8Q9UP79 889 aa14.9□□□□□ -0.02
CLDN11-205ENST00000480067 A0A0G2JS52 829 aa14.89□□□□□ -0.03
CLDN11-205ENST00000480067 MYT1Q01538 1121 aa14.89□□□□□ -0.03
CLDN11-205ENST00000480067 POTEAQ6S8J7 498 aa14.89□□□□□ -0.03
CLDN11-205ENST00000480067 CDCA7Q9BWT1 371 aaPredicted RBP14.89□□□□□ -0.03
CLDN11-205ENST00000480067 TATP17735 454 aaPredicted RBP14.88□□□□□ -0.03
CLDN11-205ENST00000480067 FAM9BQ8IZU0 186 aa14.88□□□□□ -0.03
CLDN11-205ENST00000480067 PIAS4Q8N2W9 510 aaPredicted RBP14.88□□□□□ -0.03
CLDN11-205ENST00000480067 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.87□□□□□ -0.03
CLDN11-205ENST00000480067 NEFMP07197 916 aa14.87□□□□□ -0.03
CLDN11-205ENST00000480067 KDRP35968 1356 aa14.87□□□□□ -0.03
CLDN11-205ENST00000480067 ONECUT3O60422 494 aaPredicted RBP14.86□□□□□ -0.03
CLDN11-205ENST00000480067 PRKAR2BP31323 418 aa14.86□□□□□ -0.03
CLDN11-205ENST00000480067 RSPH6AQ9H0K4 717 aa14.86□□□□□ -0.03
CLDN11-205ENST00000480067 FAM208AQ9UK61 1670 aaKnown RBP14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms