RNA–Protein interactions for RNA: ENST00000480045.5

LRP8-209, Transcript of LDL receptor related protein 8, humanhuman

TSL 5

Gene LRP8, Length 3,231 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP8-209ENST00000480045 GGNBP2Q9H3C7 697 aa24.44■■□□□ 1.5
LRP8-209ENST00000480045 ATP2B3Q16720 1220 aa24.43■■□□□ 1.5
LRP8-209ENST00000480045 PREX2Q70Z35 1606 aa24.43■■□□□ 1.5
LRP8-209ENST00000480045 FGD1P98174 961 aa24.42■■□□□ 1.5
LRP8-209ENST00000480045 PLCB2Q00722 1185 aa24.42■■□□□ 1.5
LRP8-209ENST00000480045 NOLC1Q14978 699 aaKnown RBP eCLIP24.42■■□□□ 1.5
LRP8-209ENST00000480045 GDPD2Q9HCC8 539 aa24.42■■□□□ 1.5
LRP8-209ENST00000480045 SHROOM2Q13796 1616 aa24.42■■□□□ 1.5
LRP8-209ENST00000480045 MBD3O95983 291 aa24.42■■□□□ 1.5
LRP8-209ENST00000480045 SAFB2Q14151 953 aaKnown RBP eCLIP24.42■■□□□ 1.5
LRP8-209ENST00000480045 SENP3Q9H4L4 574 aaPredicted RBP24.42■■□□□ 1.5
LRP8-209ENST00000480045 CFAP74Q9C0B2 1584 aa24.42■■□□□ 1.5
LRP8-209ENST00000480045 USP25Q9UHP3 1055 aa24.41■■□□□ 1.5
LRP8-209ENST00000480045 ALDH1L2Q3SY69 923 aa24.41■■□□□ 1.5
LRP8-209ENST00000480045 INTS3Q68E01 1043 aaKnown RBP24.41■■□□□ 1.5
LRP8-209ENST00000480045 AFAP1Q8N556 730 aa24.41■■□□□ 1.5
LRP8-209ENST00000480045 OTUD7AQ8TE49 926 aaPredicted RBP24.41■■□□□ 1.5
LRP8-209ENST00000480045 SPHKAPQ2M3C7 1700 aa24.41■■□□□ 1.5
LRP8-209ENST00000480045 KIF3AQ9Y496 699 aa24.4■■□□□ 1.5
LRP8-209ENST00000480045 ATAD2Q6PL18 1390 aa24.4■■□□□ 1.5
LRP8-209ENST00000480045 THUMPD2Q9BTF0 503 aaKnown RBP24.4■■□□□ 1.5
LRP8-209ENST00000480045 HMGN5P82970 282 aaKnown RBP24.4■■□□□ 1.5
LRP8-209ENST00000480045 ARHGAP31Q2M1Z3 1444 aa24.4■■□□□ 1.5
LRP8-209ENST00000480045 NCBP3Q53F19 620 aaKnown RBP24.39■■□□□ 1.49
LRP8-209ENST00000480045 PRIMPOLQ96LW4 560 aa24.39■■□□□ 1.49
LRP8-209ENST00000480045 TTC22Q5TAA0 569 aa24.39■■□□□ 1.49
LRP8-209ENST00000480045 CHMP4BQ9H444 224 aaKnown RBP24.38■■□□□ 1.49
LRP8-209ENST00000480045 CLTCL1P53675 1640 aa24.38■■□□□ 1.49
LRP8-209ENST00000480045 TSPYL6Q8N831 410 aa24.38■■□□□ 1.49
LRP8-209ENST00000480045 SPAG9O60271 1321 aaKnown RBP24.37■■□□□ 1.49
LRP8-209ENST00000480045 ERCC6Q03468 1493 aa24.37■■□□□ 1.49
LRP8-209ENST00000480045 TRPM2O94759 1503 aa24.37■■□□□ 1.49
LRP8-209ENST00000480045 KIF3BO15066 747 aa24.37■■□□□ 1.49
LRP8-209ENST00000480045 NEK4P51957 841 aa24.37■■□□□ 1.49
LRP8-209ENST00000480045 PIBF1Q8WXW3 757 aa24.37■■□□□ 1.49
LRP8-209ENST00000480045 CABP2Q9NPB3 220 aa24.37■■□□□ 1.49
LRP8-209ENST00000480045 CASC1Q6TDU7 716 aa24.37■■□□□ 1.49
LRP8-209ENST00000480045 IL16Q14005 1332 aa24.36■■□□□ 1.49
LRP8-209ENST00000480045 SDSP20132 328 aa24.35■■□□□ 1.49
LRP8-209ENST00000480045 GTPBP4Q9BZE4 634 aaKnown RBP24.35■■□□□ 1.49
LRP8-209ENST00000480045 SMARCA5O60264 1052 aaPredicted RBP24.35■■□□□ 1.49
LRP8-209ENST00000480045 SYAP1Q96A49 352 aaPredicted RBP24.35■■□□□ 1.49
LRP8-209ENST00000480045 BCL2L12Q9HB09 334 aa24.35■■□□□ 1.49
LRP8-209ENST00000480045 EFCAB2Q5VUJ9 269 aa24.34■■□□□ 1.49
LRP8-209ENST00000480045 BBXQ8WY36 941 aaPredicted RBP24.34■■□□□ 1.49
LRP8-209ENST00000480045 PDCL2Q8N4E4 241 aa24.34■■□□□ 1.49
LRP8-209ENST00000480045 GADD45BO75293 160 aaPredicted RBP24.33■■□□□ 1.49
LRP8-209ENST00000480045 MRPL50Q8N5N7 158 aaKnown RBP24.33■■□□□ 1.49
LRP8-209ENST00000480045 TMX3Q96JJ7 454 aa24.33■■□□□ 1.49
LRP8-209ENST00000480045 ADCY5O95622 1261 aa24.33■■□□□ 1.48
LRP8-209ENST00000480045 UGGT1Q9NYU2 1555 aa24.32■■□□□ 1.48
LRP8-209ENST00000480045 TRAPPC8Q9Y2L5 1435 aa24.31■■□□□ 1.48
LRP8-209ENST00000480045 VAMP4O75379 141 aa24.31■■□□□ 1.48
LRP8-209ENST00000480045 SBNO2Q9Y2G9 1366 aa24.31■■□□□ 1.48
LRP8-209ENST00000480045 U2AF2P26368 475 aaKnown RBP eCLIP24.31■■□□□ 1.48
LRP8-209ENST00000480045 NUTM2DQ5VT03 806 aaPredicted RBP24.31■■□□□ 1.48
LRP8-209ENST00000480045 CFAP44Q96MT7 982 aa24.31■■□□□ 1.48
LRP8-209ENST00000480045 KIF20AO95235 890 aa24.3■■□□□ 1.48
LRP8-209ENST00000480045 REC8O95072 547 aa24.3■■□□□ 1.48
LRP8-209ENST00000480045 ADGRL1O94910 1474 aa24.29■■□□□ 1.48
LRP8-209ENST00000480045 DIAPH1O60610 1272 aaKnown RBP24.29■■□□□ 1.48
LRP8-209ENST00000480045 HCLS1P14317 486 aaPredicted RBP24.28■■□□□ 1.48
LRP8-209ENST00000480045 PHF14O94880 888 aa24.28■■□□□ 1.48
LRP8-209ENST00000480045 LETM1O95202 739 aaPredicted RBP24.28■■□□□ 1.48
LRP8-209ENST00000480045 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.28■■□□□ 1.483e-6■■■■■ 36
LRP8-209ENST00000480045 ABCA6Q8N139 1617 aa24.28■■□□□ 1.48
LRP8-209ENST00000480045 PRKAR2BP31323 418 aa24.27■■□□□ 1.48
LRP8-209ENST00000480045 GTF2F1P35269 517 aaKnown RBP eCLIP24.27■■□□□ 1.48
LRP8-209ENST00000480045 BRD1O95696 1058 aa24.27■■□□□ 1.48
LRP8-209ENST00000480045 DCTPP1Q9H773 170 aa24.27■■□□□ 1.48
LRP8-209ENST00000480045 ADGRB2O60241 1585 aa24.27■■□□□ 1.48
LRP8-209ENST00000480045 EVC2Q86UK5 1308 aa24.25■■□□□ 1.47
LRP8-209ENST00000480045 HMOX1P09601 288 aa24.25■■□□□ 1.47
LRP8-209ENST00000480045 CHAF1AQ13111 956 aaPredicted RBP24.25■■□□□ 1.47
LRP8-209ENST00000480045 MED14O60244 1454 aa24.25■■□□□ 1.47
LRP8-209ENST00000480045 ERC2O15083 957 aa24.25■■□□□ 1.47
LRP8-209ENST00000480045 FKBP5Q13451 457 aaPredicted RBP24.25■■□□□ 1.47
LRP8-209ENST00000480045 USP48Q86UV5 1035 aa24.25■■□□□ 1.47
LRP8-209ENST00000480045 SRPK2P78362 688 aaKnown RBP24.24■■□□□ 1.47
LRP8-209ENST00000480045 ARHGAP45Q92619 1136 aa24.24■■□□□ 1.47
LRP8-209ENST00000480045 RIOK3O14730 519 aaKnown RBP24.24■■□□□ 1.47
LRP8-209ENST00000480045 FBLN1P23142 703 aa24.24■■□□□ 1.47
LRP8-209ENST00000480045 ZNF771Q7L3S4 317 aaPredicted RBP24.23■■□□□ 1.47
LRP8-209ENST00000480045 SPC24Q8NBT2 197 aa24.23■■□□□ 1.47
LRP8-209ENST00000480045 ANKRD36BQ8N2N9 1353 aa24.23■■□□□ 1.47
LRP8-209ENST00000480045 MAP3K4Q9Y6R4 1608 aa24.23■■□□□ 1.47
LRP8-209ENST00000480045 TWISTNBQ3B726 338 aaPredicted RBP24.22■■□□□ 1.47
LRP8-209ENST00000480045 FAM184AQ8NB25 1140 aa24.22■■□□□ 1.47
LRP8-209ENST00000480045 ZNF428Q96B54 188 aa24.22■■□□□ 1.47
LRP8-209ENST00000480045 CGNQ9P2M7 1197 aaKnown RBP24.22■■□□□ 1.47
LRP8-209ENST00000480045 ABCC4O15439 1325 aa24.22■■□□□ 1.47
LRP8-209ENST00000480045 BCL11BQ9C0K0 894 aaPredicted RBP24.21■■□□□ 1.47
LRP8-209ENST00000480045 UPF3BQ9BZI7 483 aaKnown RBP24.2■■□□□ 1.47
LRP8-209ENST00000480045 PHACTR3Q96KR7 559 aa24.2■■□□□ 1.46
LRP8-209ENST00000480045 BRPF1P55201 1214 aaPredicted RBP24.2■■□□□ 1.46
LRP8-209ENST00000480045 TSHZ3Q63HK5 1081 aa24.2■■□□□ 1.46
LRP8-209ENST00000480045 API5Q9BZZ5 524 aaKnown RBP24.2■■□□□ 1.46
LRP8-209ENST00000480045 DIAPH3Q9NSV4 1193 aa24.2■■□□□ 1.46
LRP8-209ENST00000480045 NSD2O96028 1365 aa24.19■■□□□ 1.46
LRP8-209ENST00000480045 MBIPQ9NS73 344 aa24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms