RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 IGHDP01880 384 aa17.37■□□□□ 0.37
COL20A1-206ENST00000479501 CNTROBQ8N137 903 aa17.37■□□□□ 0.37
COL20A1-206ENST00000479501 LRRCC1Q9C099 1032 aa17.37■□□□□ 0.37
COL20A1-206ENST00000479501 KDM6BO15054 1643 aa17.37■□□□□ 0.37
COL20A1-206ENST00000479501 IL16Q14005 1332 aa17.37■□□□□ 0.37
COL20A1-206ENST00000479501 GNAT3A8MTJ3 354 aa17.37■□□□□ 0.37
COL20A1-206ENST00000479501 MCTP1Q6DN14 999 aa17.36■□□□□ 0.37
COL20A1-206ENST00000479501 TOMM22Q9NS69 142 aa17.36■□□□□ 0.37
COL20A1-206ENST00000479501 CCDC27Q2M243 656 aa17.36■□□□□ 0.37
COL20A1-206ENST00000479501 TRAK2O60296 914 aa17.35■□□□□ 0.37
COL20A1-206ENST00000479501 TATP17735 454 aaPredicted RBP17.35■□□□□ 0.37
COL20A1-206ENST00000479501 SMC3Q9UQE7 1217 aa17.35■□□□□ 0.37
COL20A1-206ENST00000479501 SYTL4Q96C24 671 aaPredicted RBP17.35■□□□□ 0.37
COL20A1-206ENST00000479501 CHMP4CQ96CF2 233 aa17.35■□□□□ 0.37
COL20A1-206ENST00000479501 MAST1Q9Y2H9 1570 aa17.34■□□□□ 0.37
COL20A1-206ENST00000479501 SF3A1Q15459 793 aaKnown RBP17.34■□□□□ 0.37
COL20A1-206ENST00000479501 XPCQ01831 940 aaPredicted RBP17.33■□□□□ 0.37
COL20A1-206ENST00000479501 NEUROD6Q96NK8 337 aa17.33■□□□□ 0.37
COL20A1-206ENST00000479501 MRE11P49959 708 aa17.33■□□□□ 0.36
COL20A1-206ENST00000479501 ACEP12821 1306 aa17.33■□□□□ 0.36
COL20A1-206ENST00000479501 NPC1L1Q9UHC9 1359 aa17.33■□□□□ 0.36
COL20A1-206ENST00000479501 KCNH5Q8NCM2 988 aa17.32■□□□□ 0.36
COL20A1-206ENST00000479501 ABCA8O94911 1581 aa17.32■□□□□ 0.36
COL20A1-206ENST00000479501 ARHGEF5Q12774 1597 aa17.32■□□□□ 0.36
COL20A1-206ENST00000479501 MCM2P49736 904 aa17.32■□□□□ 0.36
COL20A1-206ENST00000479501 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.32■□□□□ 0.36
COL20A1-206ENST00000479501 ATP7AQ04656 1500 aa17.32■□□□□ 0.36
COL20A1-206ENST00000479501 VPS37CA5D8V6 355 aaPredicted RBP17.31■□□□□ 0.36
COL20A1-206ENST00000479501 ADGBQ8N7X0 1667 aa17.31■□□□□ 0.36
COL20A1-206ENST00000479501 TNRQ92752 1358 aa17.31■□□□□ 0.36
COL20A1-206ENST00000479501 SRGAP3O43295 1099 aa17.31■□□□□ 0.36
COL20A1-206ENST00000479501 ERC1Q8IUD2 1116 aa17.31■□□□□ 0.36
COL20A1-206ENST00000479501 FSD1Q9BTV5 496 aa17.31■□□□□ 0.36
COL20A1-206ENST00000479501 MBIPQ9NS73 344 aa17.31■□□□□ 0.36
COL20A1-206ENST00000479501 PHF8Q9UPP1 1060 aa17.31■□□□□ 0.36
COL20A1-206ENST00000479501 PCDHB15Q9Y5E8 787 aa17.31■□□□□ 0.36
COL20A1-206ENST00000479501 FAM83GA6ND36 823 aa17.3■□□□□ 0.36
COL20A1-206ENST00000479501 K7ELQ4 463 aaPredicted RBP17.3■□□□□ 0.36
COL20A1-206ENST00000479501 EXOC6BQ9Y2D4 811 aa17.3■□□□□ 0.36
COL20A1-206ENST00000479501 BTBD11A6QL63 1104 aa17.3■□□□□ 0.36
COL20A1-206ENST00000479501 UHRF1BP1LA0JNW5 1464 aa17.3■□□□□ 0.36
COL20A1-206ENST00000479501 POLKQ9UBT6 870 aa17.29■□□□□ 0.36
COL20A1-206ENST00000479501 TULP1O00294 542 aaPredicted RBP17.29■□□□□ 0.36
COL20A1-206ENST00000479501 TAF7Q15545 349 aaPredicted RBP17.29■□□□□ 0.36
COL20A1-206ENST00000479501 TTC21BQ7Z4L5 1316 aa17.29■□□□□ 0.36
COL20A1-206ENST00000479501 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.29■□□□□ 0.36
COL20A1-206ENST00000479501 ZC3H6P61129 1189 aaKnown RBP17.29■□□□□ 0.36
COL20A1-206ENST00000479501 TPM4P67936 248 aa17.29■□□□□ 0.36
COL20A1-206ENST00000479501 ISY1Q9ULR0 285 aaKnown RBP17.29■□□□□ 0.36
COL20A1-206ENST00000479501 IL1RAPL2Q9NP60 686 aa17.28■□□□□ 0.36
COL20A1-206ENST00000479501 SPINK5Q9NQ38 1064 aaPredicted RBP17.28■□□□□ 0.36
COL20A1-206ENST00000479501 RIMS2Q9UQ26 1411 aa17.28■□□□□ 0.36
COL20A1-206ENST00000479501 CPLX2Q6PUV4 134 aaKnown RBP17.28■□□□□ 0.36
COL20A1-206ENST00000479501 SPG7Q9UQ90 795 aa17.28■□□□□ 0.36
COL20A1-206ENST00000479501 F6X3S4 739 aa17.27■□□□□ 0.36
COL20A1-206ENST00000479501 CCDC34Q96HJ3 373 aa17.27■□□□□ 0.36
COL20A1-206ENST00000479501 USHBP1Q8N6Y0 703 aa17.27■□□□□ 0.35
COL20A1-206ENST00000479501 APPP05067 770 aa17.26■□□□□ 0.35
COL20A1-206ENST00000479501 HSP90AB2PQ58FF8 381 aa17.26■□□□□ 0.35
COL20A1-206ENST00000479501 RBM33Q96EV2 1170 aaKnown RBP17.26■□□□□ 0.35
COL20A1-206ENST00000479501 A0A1W2PP64 1363 aa17.26■□□□□ 0.35
COL20A1-206ENST00000479501 FOXO3O43524 673 aa17.26■□□□□ 0.35
COL20A1-206ENST00000479501 PRKCSHP14314 528 aaPredicted RBP17.26■□□□□ 0.35
COL20A1-206ENST00000479501 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.26■□□□□ 0.35
COL20A1-206ENST00000479501 PSMA5P28066 241 aa17.25■□□□□ 0.35
COL20A1-206ENST00000479501 CABP4P57796 275 aa17.25■□□□□ 0.35
COL20A1-206ENST00000479501 HIP1O00291 1037 aa17.25■□□□□ 0.35
COL20A1-206ENST00000479501 CPLX1O14810 134 aa17.25■□□□□ 0.35
COL20A1-206ENST00000479501 MCM4P33991 863 aa17.25■□□□□ 0.35
COL20A1-206ENST00000479501 ZNF771Q7L3S4 317 aaPredicted RBP17.25■□□□□ 0.35
COL20A1-206ENST00000479501 ARHGAP45Q92619 1136 aa17.25■□□□□ 0.35
COL20A1-206ENST00000479501 CIZ1Q9ULV3 898 aaPredicted RBP17.25■□□□□ 0.35
COL20A1-206ENST00000479501 SMARCA5O60264 1052 aaPredicted RBP17.24■□□□□ 0.35
COL20A1-206ENST00000479501 MYL6BP14649 208 aa17.24■□□□□ 0.35
COL20A1-206ENST00000479501 RNF123Q5XPI4 1314 aa17.24■□□□□ 0.35
COL20A1-206ENST00000479501 PPIP5K1Q6PFW1 1433 aa17.24■□□□□ 0.35
COL20A1-206ENST00000479501 CWC22Q9HCG8 908 aaKnown RBP17.24■□□□□ 0.35
COL20A1-206ENST00000479501 ZRANB1Q9UGI0 708 aa17.24■□□□□ 0.35
COL20A1-206ENST00000479501 TRDNQ13061 729 aa17.24■□□□□ 0.35
COL20A1-206ENST00000479501 HDAC1Q13547 482 aaPredicted RBP17.24■□□□□ 0.35
COL20A1-206ENST00000479501 PTPRCP08575 1304 aa17.24■□□□□ 0.35
COL20A1-206ENST00000479501 SIL1Q9H173 461 aa17.24■□□□□ 0.35
COL20A1-206ENST00000479501 STRN4Q9NRL3 753 aa17.24■□□□□ 0.35
COL20A1-206ENST00000479501 RLBP1P12271 317 aa17.23■□□□□ 0.35
COL20A1-206ENST00000479501 TNNQ9UQP3 1299 aa17.23■□□□□ 0.35
COL20A1-206ENST00000479501 TOM1L2Q6ZVM7 507 aa17.23■□□□□ 0.35
COL20A1-206ENST00000479501 R3HCC1Q9Y3T6 440 aaKnown RBP17.23■□□□□ 0.35
COL20A1-206ENST00000479501 NASPP49321 788 aaPredicted RBP17.22■□□□□ 0.35
COL20A1-206ENST00000479501 SYNE3Q6ZMZ3 975 aa17.22■□□□□ 0.35
COL20A1-206ENST00000479501 GOLGA6L1Q8N7Z2 621 aa17.22■□□□□ 0.35
COL20A1-206ENST00000479501 PRDM11Q9NQV5 511 aa17.22■□□□□ 0.35
COL20A1-206ENST00000479501 MAP4K4O95819 1239 aaPredicted RBP17.22■□□□□ 0.35
COL20A1-206ENST00000479501 WASHC4Q2M389 1173 aa17.22■□□□□ 0.35
COL20A1-206ENST00000479501 CAVIN1Q6NZI2 390 aaKnown RBP17.22■□□□□ 0.35
COL20A1-206ENST00000479501 PKNOX2Q96KN3 472 aa17.22■□□□□ 0.35
COL20A1-206ENST00000479501 YTHDC2Q9H6S0 1430 aaKnown RBP17.22■□□□□ 0.35
COL20A1-206ENST00000479501 PRPF40AO75400 957 aaKnown RBP17.22■□□□□ 0.35
COL20A1-206ENST00000479501 BICD2Q8TD16 824 aa17.22■□□□□ 0.35
COL20A1-206ENST00000479501 DNAJC2Q99543 621 aaKnown RBP17.22■□□□□ 0.35
COL20A1-206ENST00000479501 TBC1D2Q9BYX2 928 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms