RNA–Protein interactions for RNA: ENST00000479356.1

SDK2-204, Transcript of sidekick cell adhesion molecule 2, humanhuman

TSL 1 (best)

Gene SDK2, Length 5,333 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDK2-204ENST00000479356 PTPN14Q15678 1187 aa15.24■□□□□ 0.03
SDK2-204ENST00000479356 MAGEC2Q9UBF1 373 aaPredicted RBP15.24■□□□□ 0.03
SDK2-204ENST00000479356 CCDC9Q9Y3X0 531 aaKnown RBP15.24■□□□□ 0.03
SDK2-204ENST00000479356 CTR9Q6PD62 1173 aa15.23■□□□□ 0.03
SDK2-204ENST00000479356 KIF18AQ8NI77 898 aa15.23■□□□□ 0.03
SDK2-204ENST00000479356 TROQ12816 1431 aaPredicted RBP15.23■□□□□ 0.03
SDK2-204ENST00000479356 SSR1P43307 286 aaKnown RBP15.23■□□□□ 0.03
SDK2-204ENST00000479356 C1orf141Q5JVX7 400 aa15.23■□□□□ 0.03
SDK2-204ENST00000479356 ZNF396Q96N95 335 aaPredicted RBP15.23■□□□□ 0.03
SDK2-204ENST00000479356 GTPBP4Q9BZE4 634 aaKnown RBP15.23■□□□□ 0.03
SDK2-204ENST00000479356 FAM177A1Q8N128 213 aaPredicted RBP15.23■□□□□ 0.03
SDK2-204ENST00000479356 MCM3P25205 808 aa15.23■□□□□ 0.03
SDK2-204ENST00000479356 WDR33Q9C0J8 1336 aaKnown RBP15.22■□□□□ 0.03
SDK2-204ENST00000479356 GOLGA6L10A0A0M3HER8 536 aa15.22■□□□□ 0.03
SDK2-204ENST00000479356 POLR3GO15318 223 aaPredicted RBP15.22■□□□□ 0.03
SDK2-204ENST00000479356 DACH1Q9UI36 760 aa15.22■□□□□ 0.03
SDK2-204ENST00000479356 MAP2K1Q02750 393 aaPredicted RBP15.21■□□□□ 0.03
SDK2-204ENST00000479356 TEFQ10587 303 aa15.21■□□□□ 0.03
SDK2-204ENST00000479356 NFXL1Q6ZNB6 911 aa15.21■□□□□ 0.03
SDK2-204ENST00000479356 ERC2O15083 957 aa15.21■□□□□ 0.03
SDK2-204ENST00000479356 NEK4P51957 841 aa15.21■□□□□ 0.03
SDK2-204ENST00000479356 HMOX1P09601 288 aa15.21■□□□□ 0.02
SDK2-204ENST00000479356 FOSBP53539 338 aa15.21■□□□□ 0.02
SDK2-204ENST00000479356 RNF187Q5TA31 235 aaPredicted RBP15.2■□□□□ 0.02
SDK2-204ENST00000479356 SPATA24Q86W54 205 aa15.2■□□□□ 0.02
SDK2-204ENST00000479356 DAPK1P53355 1430 aa15.2■□□□□ 0.02
SDK2-204ENST00000479356 K7ELQ4 463 aaPredicted RBP15.2■□□□□ 0.02
SDK2-204ENST00000479356 PDIA4P13667 645 aaKnown RBP15.2■□□□□ 0.02
SDK2-204ENST00000479356 BRPF1P55201 1214 aaPredicted RBP15.2■□□□□ 0.02
SDK2-204ENST00000479356 BMS1Q14692 1282 aaKnown RBP15.2■□□□□ 0.02
SDK2-204ENST00000479356 LRRFIP2Q9Y608 721 aaKnown RBP15.2■□□□□ 0.02
SDK2-204ENST00000479356 XPCQ01831 940 aaPredicted RBP15.2■□□□□ 0.02
SDK2-204ENST00000479356 EIF2S2P20042 333 aaKnown RBP15.2■□□□□ 0.02
SDK2-204ENST00000479356 SUPT6HQ7KZ85 1726 aaKnown RBP15.2■□□□□ 0.02
SDK2-204ENST00000479356 LUZP1Q86V48 1076 aa15.19■□□□□ 0.02
SDK2-204ENST00000479356 PRIMPOLQ96LW4 560 aa15.19■□□□□ 0.02
SDK2-204ENST00000479356 ERICH2A1L162 156 aa15.19■□□□□ 0.02
SDK2-204ENST00000479356 TXLNAP40222 546 aa15.19■□□□□ 0.02
SDK2-204ENST00000479356 TDO2P48775 406 aa15.19■□□□□ 0.02
SDK2-204ENST00000479356 HSP90AB4PQ58FF6 505 aa15.19■□□□□ 0.02
SDK2-204ENST00000479356 NECTIN2Q92692 538 aa15.19■□□□□ 0.02
SDK2-204ENST00000479356 TRIM34Q9BYJ4 488 aa15.19■□□□□ 0.02
SDK2-204ENST00000479356 PPP2R1AP30153 589 aa15.19■□□□□ 0.02
SDK2-204ENST00000479356 GBP2P32456 591 aaPredicted RBP15.19■□□□□ 0.02
SDK2-204ENST00000479356 KIAA1328Q86T90 577 aa15.19■□□□□ 0.02
SDK2-204ENST00000479356 CDCA7LQ96GN5 454 aa15.19■□□□□ 0.02
SDK2-204ENST00000479356 BRMS1Q9HCU9 246 aa15.19■□□□□ 0.02
SDK2-204ENST00000479356 CFAP45Q9UL16 551 aa15.19■□□□□ 0.02
SDK2-204ENST00000479356 CCDC148Q8NFR7 591 aa15.19■□□□□ 0.02
SDK2-204ENST00000479356 PLEKHH2Q8IVE3 1493 aa15.18■□□□□ 0.02
SDK2-204ENST00000479356 TCEAL9Q9UHQ7 104 aa15.18■□□□□ 0.02
SDK2-204ENST00000479356 JAKMIP3Q5VZ66 844 aa15.18■□□□□ 0.02
SDK2-204ENST00000479356 CEP57L1Q8IYX8 460 aa15.18■□□□□ 0.02
SDK2-204ENST00000479356 MTHFSP49914 203 aa15.18■□□□□ 0.02
SDK2-204ENST00000479356 CDK13Q14004 1512 aaKnown RBP15.18■□□□□ 0.02
SDK2-204ENST00000479356 PANK1Q8TE04 598 aa15.18■□□□□ 0.02
SDK2-204ENST00000479356 IVLP07476 585 aa15.17■□□□□ 0.02
SDK2-204ENST00000479356 XBP1P17861 261 aa15.17■□□□□ 0.02
SDK2-204ENST00000479356 KRT222Q8N1A0 295 aa15.17■□□□□ 0.02
SDK2-204ENST00000479356 JMYQ8N9B5 988 aa15.17■□□□□ 0.02
SDK2-204ENST00000479356 ZSCAN12O43309 604 aa15.17■□□□□ 0.02
SDK2-204ENST00000479356 KRT85P78386 507 aa15.17■□□□□ 0.02
SDK2-204ENST00000479356 TMX4Q9H1E5 349 aaPredicted RBP15.17■□□□□ 0.02
SDK2-204ENST00000479356 STK38Q15208 465 aa15.17■□□□□ 0.02
SDK2-204ENST00000479356 SMARCC1Q92922 1105 aaPredicted RBP15.17■□□□□ 0.02
SDK2-204ENST00000479356 CLCN1P35523 988 aa15.17■□□□□ 0.02
SDK2-204ENST00000479356 WDR97A6NE52 1622 aa15.16■□□□□ 0.02
SDK2-204ENST00000479356 POTEB2H3BUK9 544 aa15.16■□□□□ 0.02
SDK2-204ENST00000479356 GNAI1P63096 354 aa15.16■□□□□ 0.02
SDK2-204ENST00000479356 RALYLQ86SE5 291 aaKnown RBP15.16■□□□□ 0.02
SDK2-204ENST00000479356 ABCA10Q8WWZ4 1543 aa15.16■□□□□ 0.02
SDK2-204ENST00000479356 ARHGAP29Q52LW3 1261 aa15.16■□□□□ 0.02
SDK2-204ENST00000479356 AMOTL1Q8IY63 956 aa15.16■□□□□ 0.02
SDK2-204ENST00000479356 SPDYE4A6NLX3 237 aa15.15■□□□□ 0.02
SDK2-204ENST00000479356 LMAN1P49257 510 aa15.15■□□□□ 0.02
SDK2-204ENST00000479356 PSME1Q06323 249 aa15.15■□□□□ 0.02
SDK2-204ENST00000479356 CLGNO14967 610 aa15.15■□□□□ 0.02
SDK2-204ENST00000479356 CCAR1Q8IX12 1150 aaKnown RBP15.15■□□□□ 0.02
SDK2-204ENST00000479356 NINLQ9Y2I6 1382 aa15.15■□□□□ 0.02
SDK2-204ENST00000479356 EPRSP07814 1512 aaKnown RBP15.15■□□□□ 0.02
SDK2-204ENST00000479356 PCF11O94913 1555 aaKnown RBP15.15■□□□□ 0.02
SDK2-204ENST00000479356 NUP62CLQ9H1M0 184 aa15.15■□□□□ 0.02
SDK2-204ENST00000479356 MSH5O43196 834 aa15.14■□□□□ 0.01
SDK2-204ENST00000479356 CCDC91Q7Z6B0 441 aa15.14■□□□□ 0.01
SDK2-204ENST00000479356 PEG3Q9GZU2 1588 aa15.14■□□□□ 0.01
SDK2-204ENST00000479356 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.14■□□□□ 0.01
SDK2-204ENST00000479356 TCP11L2Q8N4U5 519 aa15.14■□□□□ 0.01
SDK2-204ENST00000479356 SMTNL1A8MU46 457 aa15.14■□□□□ 0.01
SDK2-204ENST00000479356 SMC1AQ14683 1233 aaKnown RBP15.14■□□□□ 0.01
SDK2-204ENST00000479356 EPB41L2O43491 1005 aaKnown RBP15.13■□□□□ 0.01
SDK2-204ENST00000479356 FKBP5Q13451 457 aaPredicted RBP15.13■□□□□ 0.01
SDK2-204ENST00000479356 NAIPQ13075 1403 aa15.13■□□□□ 0.01
SDK2-204ENST00000479356 SCAPERQ9BY12 1400 aa15.13■□□□□ 0.01
SDK2-204ENST00000479356 SYCP1Q15431 976 aa15.13■□□□□ 0.01
SDK2-204ENST00000479356 C9orf78Q9NZ63 289 aaPredicted RBP15.13■□□□□ 0.01
SDK2-204ENST00000479356 SFPQP23246 707 aaKnown RBP eCLIP15.13■□□□□ 0.01
SDK2-204ENST00000479356 UPF3BQ9BZI7 483 aaKnown RBP15.13■□□□□ 0.01
SDK2-204ENST00000479356 PDZRN3Q9UPQ7 1066 aa15.13■□□□□ 0.01
SDK2-204ENST00000479356 CCDC175P0C221 793 aa15.13■□□□□ 0.01
SDK2-204ENST00000479356 G3BP1Q13283 466 aaKnown RBP eCLIP15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms