RNA–Protein interactions for RNA: ENST00000478913.1

CCDC171-207, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-207ENST00000478913 RC3H1Q5TC82 1133 aaKnown RBP9.79□□□□□ -0.84
CCDC171-207ENST00000478913 PCDHB9Q9Y5E1 797 aa9.79□□□□□ -0.84
CCDC171-207ENST00000478913 ST8SIA5O15466 376 aa9.78□□□□□ -0.84
CCDC171-207ENST00000478913 ERFEQ4G0M1 354 aa9.78□□□□□ -0.84
CCDC171-207ENST00000478913 ZNF598Q86UK7 904 aaKnown RBP9.78□□□□□ -0.84
CCDC171-207ENST00000478913 GLMNQ92990 594 aa9.78□□□□□ -0.84
CCDC171-207ENST00000478913 SLC10A4Q96EP9 437 aa9.78□□□□□ -0.84
CCDC171-207ENST00000478913 LOC100996750A0A140TA64 210 aa9.77□□□□□ -0.85
CCDC171-207ENST00000478913 DZIP3Q86Y13 1208 aaKnown RBP9.77□□□□□ -0.85
CCDC171-207ENST00000478913 FAM174AQ8TBP5 190 aa9.77□□□□□ -0.85
CCDC171-207ENST00000478913 CALR3Q96L12 384 aaKnown RBP9.77□□□□□ -0.85
CCDC171-207ENST00000478913 C1QTNF2Q9BXJ5 285 aa9.77□□□□□ -0.85
CCDC171-207ENST00000478913 KRTAP4-6Q9BYQ5 205 aa9.77□□□□□ -0.85
CCDC171-207ENST00000478913 ARHGEF11O15085 1522 aa9.77□□□□□ -0.85
CCDC171-207ENST00000478913 WNT7AO00755 349 aa9.76□□□□□ -0.85
CCDC171-207ENST00000478913 MCCD1P59942 119 aaPredicted RBP9.76□□□□□ -0.85
CCDC171-207ENST00000478913 HDGFL1Q5TGJ6 251 aa9.76□□□□□ -0.85
CCDC171-207ENST00000478913 TRMT44Q8IYL2 757 aaKnown RBP9.75□□□□□ -0.85
CCDC171-207ENST00000478913 ADAMTS19Q8TE59 1207 aa9.75□□□□□ -0.85
CCDC171-207ENST00000478913 PRR20EP86478 221 aa9.74□□□□□ -0.85
CCDC171-207ENST00000478913 PRR20CP86479 221 aa9.74□□□□□ -0.85
CCDC171-207ENST00000478913 PRR20DP86480 221 aa9.74□□□□□ -0.85
CCDC171-207ENST00000478913 PRR20BP86481 221 aa9.74□□□□□ -0.85
CCDC171-207ENST00000478913 PRR20AP86496 221 aa9.74□□□□□ -0.85
CCDC171-207ENST00000478913 FOXC1Q12948 553 aa9.74□□□□□ -0.85
CCDC171-207ENST00000478913 ALG2Q9H553 416 aa9.74□□□□□ -0.85
CCDC171-207ENST00000478913 AAASQ9NRG9 546 aa9.74□□□□□ -0.85
CCDC171-207ENST00000478913 BAZ1AQ9NRL2 1556 aaPredicted RBP9.74□□□□□ -0.85
CCDC171-207ENST00000478913 MRGPRX2Q96LB1 330 aa9.73□□□□□ -0.85
CCDC171-207ENST00000478913 C1orf115Q9H7X2 142 aa9.73□□□□□ -0.85
CCDC171-207ENST00000478913 CDV3Q9UKY7 258 aaKnown RBP9.73□□□□□ -0.85
CCDC171-207ENST00000478913 GDF9O60383 454 aa9.72□□□□□ -0.85
CCDC171-207ENST00000478913 ARID5BQ14865 1188 aa9.72□□□□□ -0.85
CCDC171-207ENST00000478913 NBPF20Q3BBV1 942 aa9.72□□□□□ -0.85
CCDC171-207ENST00000478913 LCE2CQ5TA81 110 aa9.72□□□□□ -0.85
CCDC171-207ENST00000478913 DACH1Q9UI36 760 aa9.72□□□□□ -0.85
CCDC171-207ENST00000478913 FAM187AA6NFU0 413 aa9.71□□□□□ -0.86
CCDC171-207ENST00000478913 TNFRSF10AO00220 468 aa9.71□□□□□ -0.86
CCDC171-207ENST00000478913 VASH1Q7L8A9 365 aaPredicted RBP9.71□□□□□ -0.86
CCDC171-207ENST00000478913 CCDC97Q96F63 343 aaPredicted RBP9.71□□□□□ -0.86
CCDC171-207ENST00000478913 TLL2Q9Y6L7 1015 aa9.71□□□□□ -0.86
CCDC171-207ENST00000478913 CCDC82Q8N4S0 544 aa9.7□□□□□ -0.86
CCDC171-207ENST00000478913 PKD2L1Q9P0L9 805 aa9.7□□□□□ -0.86
CCDC171-207ENST00000478913 CEP126Q9P2H0 1117 aa9.7□□□□□ -0.86
CCDC171-207ENST00000478913 MAP4K5Q9Y4K4 846 aa9.7□□□□□ -0.86
CCDC171-207ENST00000478913 SIAH2O43255 324 aa9.69□□□□□ -0.86
CCDC171-207ENST00000478913 SLFNL1Q499Z3 407 aa9.69□□□□□ -0.86
CCDC171-207ENST00000478913 MPNDQ8N594 471 aa9.68□□□□□ -0.86
CCDC171-207ENST00000478913 CDK15Q96Q40 435 aa9.68□□□□□ -0.86
CCDC171-207ENST00000478913 KCTD15Q96SI1 283 aaPredicted RBP9.68□□□□□ -0.86
CCDC171-207ENST00000478913 SERPINA10Q9UK55 444 aa9.68□□□□□ -0.86
CCDC171-207ENST00000478913 NESP48681 1621 aa9.67□□□□□ -0.86
CCDC171-207ENST00000478913 ERCC6L2Q5T890 1561 aa9.67□□□□□ -0.86
CCDC171-207ENST00000478913 GIGYF1O75420 1035 aaPredicted RBP9.67□□□□□ -0.86
CCDC171-207ENST00000478913 NFX1Q12986 1120 aaKnown RBP9.67□□□□□ -0.86
CCDC171-207ENST00000478913 WFS1O76024 890 aa9.66□□□□□ -0.86
CCDC171-207ENST00000478913 ADH1CP00326 375 aa9.66□□□□□ -0.86
CCDC171-207ENST00000478913 FSHRP23945 695 aa9.66□□□□□ -0.86
CCDC171-207ENST00000478913 RNF20Q5VTR2 975 aa9.66□□□□□ -0.86
CCDC171-207ENST00000478913 RNF135Q8IUD6 432 aa9.66□□□□□ -0.86
CCDC171-207ENST00000478913 CYP4X1Q8N118 509 aa9.66□□□□□ -0.86
CCDC171-207ENST00000478913 UCN2Q96RP3 112 aa9.66□□□□□ -0.86
CCDC171-207ENST00000478913 ARID3AQ99856 593 aa9.66□□□□□ -0.86
CCDC171-207ENST00000478913 THOC2Q8NI27 1593 aaKnown RBP9.66□□□□□ -0.86
CCDC171-207ENST00000478913 SHROOM4Q9ULL8 1493 aa9.66□□□□□ -0.86
CCDC171-207ENST00000478913 TTC24A2A3L6 582 aaPredicted RBP9.65□□□□□ -0.86
CCDC171-207ENST00000478913 ALDH1A1P00352 501 aa9.65□□□□□ -0.86
CCDC171-207ENST00000478913 RAB15P59190 212 aa9.65□□□□□ -0.86
CCDC171-207ENST00000478913 SEPT12Q8IYM1 358 aa9.65□□□□□ -0.86
CCDC171-207ENST00000478913 SNIP1Q8TAD8 396 aaKnown RBP9.65□□□□□ -0.86
CCDC171-207ENST00000478913 STK17AQ9UEE5 414 aa9.65□□□□□ -0.86
CCDC171-207ENST00000478913 ESPNB1AK53 854 aa9.64□□□□□ -0.87
CCDC171-207ENST00000478913 PIK3CDO00329 1044 aa9.64□□□□□ -0.87
CCDC171-207ENST00000478913 WASF2Q9Y6W5 498 aa9.64□□□□□ -0.87
CCDC171-207ENST00000478913 SKIP12755 728 aa9.63□□□□□ -0.87
CCDC171-207ENST00000478913 INTS6LQ5JSJ4 861 aaKnown RBP9.63□□□□□ -0.87
CCDC171-207ENST00000478913 NFATC2IPQ8NCF5 419 aa9.63□□□□□ -0.87
CCDC171-207ENST00000478913 PPP1R12CQ9BZL4 782 aa9.63□□□□□ -0.87
CCDC171-207ENST00000478913 WIPF1O43516 503 aa9.62□□□□□ -0.87
CCDC171-207ENST00000478913 ATP9BO43861 1147 aa9.62□□□□□ -0.87
CCDC171-207ENST00000478913 GRM5P41594 1212 aa9.62□□□□□ -0.87
CCDC171-207ENST00000478913 NR5A1Q13285 461 aa9.62□□□□□ -0.87
CCDC171-207ENST00000478913 TBC1D9Q6ZT07 1266 aa9.62□□□□□ -0.87
CCDC171-207ENST00000478913 PHTF2Q8N3S3 785 aa9.62□□□□□ -0.87
CCDC171-207ENST00000478913 TFIP11Q9UBB9 837 aaKnown RBP9.62□□□□□ -0.87
CCDC171-207ENST00000478913 PALM3A6NDB9 673 aaPredicted RBP9.61□□□□□ -0.87
CCDC171-207ENST00000478913 CCDC125Q86Z20 511 aa9.61□□□□□ -0.87
CCDC171-207ENST00000478913 TOR4AQ9NXH8 423 aa9.61□□□□□ -0.87
CCDC171-207ENST00000478913 GMPR2Q9P2T1 348 aaKnown RBP9.61□□□□□ -0.87
CCDC171-207ENST00000478913 DOLKQ9UPQ8 538 aa9.61□□□□□ -0.87
CCDC171-207ENST00000478913 J3QL48 77 aa9.6□□□□□ -0.87
CCDC171-207ENST00000478913 DHX9Q08211 1270 aaKnown RBP9.6□□□□□ -0.87
CCDC171-207ENST00000478913 CCDC116Q8IYX3 515 aa9.6□□□□□ -0.87
CCDC171-207ENST00000478913 PLPP7Q8NBV4 271 aa9.6□□□□□ -0.87
CCDC171-207ENST00000478913 CCDC85AQ96PX6 553 aaPredicted RBP9.6□□□□□ -0.87
CCDC171-207ENST00000478913 PCDHB11Q9Y5F2 797 aa9.6□□□□□ -0.87
CCDC171-207ENST00000478913 ARAP1Q96P48 1450 aa9.59□□□□□ -0.87
CCDC171-207ENST00000478913 USP17L5A8MUK1 530 aa9.59□□□□□ -0.87
CCDC171-207ENST00000478913 NNTQ13423 1086 aa9.59□□□□□ -0.87
CCDC171-207ENST00000478913 MAP7D1Q3KQU3 841 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms