RNA–Protein interactions for RNA: ENST00000478652.1

MCF2L2-210, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 3

Gene MCF2L2, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-210ENST00000478652 SOX12O15370 315 aa31.18■■■□□ 2.58
MCF2L2-210ENST00000478652 PDE3BQ13370 1112 aa31.18■■■□□ 2.58
MCF2L2-210ENST00000478652 NUP188Q5SRE5 1749 aa31.17■■■□□ 2.58
MCF2L2-210ENST00000478652 EZH2Q15910 746 aaKnown RBP31.16■■■□□ 2.58
MCF2L2-210ENST00000478652 ARHGEF25Q86VW2 580 aa31.16■■■□□ 2.58
MCF2L2-210ENST00000478652 TRIM26Q12899 539 aaPredicted RBP31.15■■■□□ 2.58
MCF2L2-210ENST00000478652 TOM1L2Q6ZVM7 507 aa31.12■■■□□ 2.57
MCF2L2-210ENST00000478652 SUGP2Q8IX01 1082 aaKnown RBP eCLIP31.12■■■□□ 2.57
MCF2L2-210ENST00000478652 KCNH5Q8NCM2 988 aa31.12■■■□□ 2.57
MCF2L2-210ENST00000478652 CAMKK2Q96RR4 588 aa31.12■■■□□ 2.57
MCF2L2-210ENST00000478652 WDR17Q8IZU2 1322 aa31.12■■■□□ 2.57
MCF2L2-210ENST00000478652 TMC1Q8TDI8 760 aa31.1■■■□□ 2.57
MCF2L2-210ENST00000478652 SLC12A5Q9H2X9 1139 aa31.1■■■□□ 2.57
MCF2L2-210ENST00000478652 ABCC6O95255 1503 aa31.09■■■□□ 2.57
MCF2L2-210ENST00000478652 USP31Q70CQ4 1352 aa31.09■■■□□ 2.57
MCF2L2-210ENST00000478652 APBA3O96018 575 aa31.09■■■□□ 2.57
MCF2L2-210ENST00000478652 NME9Q86XW9 330 aa31.09■■■□□ 2.57
MCF2L2-210ENST00000478652 A0A1W2PP64 1363 aa31.07■■■□□ 2.56
MCF2L2-210ENST00000478652 OVOS2A0A0G2JMS6 1433 aa31.06■■■□□ 2.56
MCF2L2-210ENST00000478652 OVOS2A0A0J9YW53 1432 aa31.06■■■□□ 2.56
MCF2L2-210ENST00000478652 OVOS2Q6IE36 1432 aa31.06■■■□□ 2.56
MCF2L2-210ENST00000478652 R3HDM1Q15032 1099 aaKnown RBP31.05■■■□□ 2.56
MCF2L2-210ENST00000478652 TESK2Q96S53 571 aa31.05■■■□□ 2.56
MCF2L2-210ENST00000478652 EDC4Q6P2E9 1401 aaKnown RBP31.05■■■□□ 2.56
MCF2L2-210ENST00000478652 RGPD3A6NKT7 1758 aaPredicted RBP31.04■■■□□ 2.56
MCF2L2-210ENST00000478652 RGPD4Q7Z3J3 1758 aa31.04■■■□□ 2.56
MCF2L2-210ENST00000478652 PARD3Q8TEW0 1356 aa31.04■■■□□ 2.56
MCF2L2-210ENST00000478652 ST20-MTHFSA0A0A6YYL1 179 aa31.02■■■□□ 2.56
MCF2L2-210ENST00000478652 DDB1Q16531 1140 aa31.02■■■□□ 2.56
MCF2L2-210ENST00000478652 HDGFL2Q7Z4V5 671 aaPredicted RBP31.02■■■□□ 2.56
MCF2L2-210ENST00000478652 CSB-PGBD3P0DP91 1061 aa31.01■■■□□ 2.55
MCF2L2-210ENST00000478652 CARD10Q9BWT7 1032 aa31■■■□□ 2.55
MCF2L2-210ENST00000478652 PUS7Q96PZ0 661 aaKnown RBP30.98■■■□□ 2.55
MCF2L2-210ENST00000478652 TERF2IPQ9NYB0 399 aa30.97■■■□□ 2.55
MCF2L2-210ENST00000478652 PTF1AQ7RTS3 328 aa30.96■■■□□ 2.55
MCF2L2-210ENST00000478652 MARCH10Q8NA82 808 aaPredicted RBP30.96■■■□□ 2.55
MCF2L2-210ENST00000478652 CCDC7Q96M83 1385 aa30.94■■■□□ 2.54
MCF2L2-210ENST00000478652 ERBB3P21860 1342 aa30.94■■■□□ 2.54
MCF2L2-210ENST00000478652 CDCA7Q9BWT1 371 aaPredicted RBP30.93■■■□□ 2.54
MCF2L2-210ENST00000478652 C11orf95C9JLR9 678 aaPredicted RBP30.92■■■□□ 2.54
MCF2L2-210ENST00000478652 RGPD2P0DJD1 1756 aa30.92■■■□□ 2.54
MCF2L2-210ENST00000478652 NINLQ9Y2I6 1382 aa30.92■■■□□ 2.54
MCF2L2-210ENST00000478652 TNS2Q63HR2 1409 aa30.91■■■□□ 2.54
MCF2L2-210ENST00000478652 USP47Q96K76 1375 aa30.91■■■□□ 2.54
MCF2L2-210ENST00000478652 FAM208AQ9UK61 1670 aaKnown RBP30.9■■■□□ 2.54
MCF2L2-210ENST00000478652 BCL9O00512 1426 aa30.9■■■□□ 2.54
MCF2L2-210ENST00000478652 KAT6BQ8WYB5 2073 aa30.88■■■□□ 2.53
MCF2L2-210ENST00000478652 NHSQ6T4R5 1651 aa30.88■■■□□ 2.53
MCF2L2-210ENST00000478652 MYOM1P52179 1685 aa30.86■■■□□ 2.53
MCF2L2-210ENST00000478652 KIF20BQ96Q89 1820 aa30.86■■■□□ 2.53
MCF2L2-210ENST00000478652 ANKRD24Q8TF21 1146 aa30.85■■■□□ 2.53
MCF2L2-210ENST00000478652 BCL11BQ9C0K0 894 aaPredicted RBP30.85■■■□□ 2.53
MCF2L2-210ENST00000478652 NLRP2Q9NX02 1062 aa30.85■■■□□ 2.53
MCF2L2-210ENST00000478652 ANKRD36BQ8N2N9 1353 aa30.84■■■□□ 2.53
MCF2L2-210ENST00000478652 EXOC5O00471 708 aa30.84■■■□□ 2.53
MCF2L2-210ENST00000478652 CASZ1Q86V15 1759 aa30.82■■■□□ 2.52
MCF2L2-210ENST00000478652 PLSCR1O15162 318 aa30.81■■■□□ 2.52
MCF2L2-210ENST00000478652 FBLN1P23142 703 aa30.81■■■□□ 2.52
MCF2L2-210ENST00000478652 NBPF14Q5TI25 921 aa30.81■■■□□ 2.52
MCF2L2-210ENST00000478652 BTAF1O14981 1849 aa30.81■■■□□ 2.52
MCF2L2-210ENST00000478652 SLC24A1O60721 1099 aa30.78■■■□□ 2.52
MCF2L2-210ENST00000478652 TMF1P82094 1093 aa30.78■■■□□ 2.52
MCF2L2-210ENST00000478652 IP6K1Q92551 441 aa30.78■■■□□ 2.52
MCF2L2-210ENST00000478652 COG3Q96JB2 828 aa30.78■■■□□ 2.52
MCF2L2-210ENST00000478652 ANO8Q9HCE9 1232 aaPredicted RBP30.78■■■□□ 2.52
MCF2L2-210ENST00000478652 SHANK3Q9BYB0 1731 aa30.78■■■□□ 2.52
MCF2L2-210ENST00000478652 IL2RBP14784 551 aa30.77■■■□□ 2.52
MCF2L2-210ENST00000478652 PROM2Q8N271 834 aa30.77■■■□□ 2.52
MCF2L2-210ENST00000478652 MAP3K19Q56UN5 1328 aa30.76■■■□□ 2.52
MCF2L2-210ENST00000478652 KCNQ2O43526 872 aa30.75■■■□□ 2.51
MCF2L2-210ENST00000478652 LTV1Q96GA3 475 aaPredicted RBP30.75■■■□□ 2.51
MCF2L2-210ENST00000478652 ACSBG1Q96GR2 724 aa30.72■■■□□ 2.51
MCF2L2-210ENST00000478652 HOXC9P31274 260 aa30.71■■■□□ 2.51
MCF2L2-210ENST00000478652 PCGF6Q9BYE7 350 aa30.7■■■□□ 2.51
MCF2L2-210ENST00000478652 GGNBP2Q9H3C7 697 aa30.7■■■□□ 2.51
MCF2L2-210ENST00000478652 DOT1LQ8TEK3 1739 aa30.7■■■□□ 2.5
MCF2L2-210ENST00000478652 FYB1O15117 783 aa30.69■■■□□ 2.5
MCF2L2-210ENST00000478652 TXNRD1Q16881 649 aa30.68■■■□□ 2.5
MCF2L2-210ENST00000478652 PAPPAQ13219 1627 aa30.67■■■□□ 2.5
MCF2L2-210ENST00000478652 AMPHP49418 695 aa30.66■■■□□ 2.5
MCF2L2-210ENST00000478652 RRS1Q15050 365 aaKnown RBP30.66■■■□□ 2.5
MCF2L2-210ENST00000478652 PDGFDQ9GZP0 370 aaPredicted RBP30.65■■■□□ 2.5
MCF2L2-210ENST00000478652 RTL1A6NKG5 1358 aa30.65■■■□□ 2.5
MCF2L2-210ENST00000478652 MEGF6O75095 1541 aa30.64■■■□□ 2.5
MCF2L2-210ENST00000478652 CLSPNQ9HAW4 1339 aa30.64■■■□□ 2.5
MCF2L2-210ENST00000478652 TIMELESSQ9UNS1 1208 aa30.63■■■□□ 2.49
MCF2L2-210ENST00000478652 CDCA8Q53HL2 280 aa30.61■■■□□ 2.49
MCF2L2-210ENST00000478652 SPON1Q9HCB6 807 aa30.61■■■□□ 2.49
MCF2L2-210ENST00000478652 CARD14Q9BXL6 1004 aa30.6■■■□□ 2.49
MCF2L2-210ENST00000478652 MAP2P11137 1827 aaKnown RBP30.59■■■□□ 2.49
MCF2L2-210ENST00000478652 ANKRD26Q9UPS8 1709 aa30.59■■■□□ 2.49
MCF2L2-210ENST00000478652 NSD3Q9BZ95 1437 aa30.59■■■□□ 2.49
MCF2L2-210ENST00000478652 DDX54Q8TDD1 881 aaKnown RBP30.59■■■□□ 2.49
MCF2L2-210ENST00000478652 LY75O60449 1722 aa30.57■■■□□ 2.48
MCF2L2-210ENST00000478652 TUBGCP6Q96RT7 1819 aa30.57■■■□□ 2.48
MCF2L2-210ENST00000478652 SLC15A2Q16348 729 aa30.55■■■□□ 2.48
MCF2L2-210ENST00000478652 NBPF6Q5VWK0 638 aa30.55■■■□□ 2.48
MCF2L2-210ENST00000478652 USHBP1Q8N6Y0 703 aa30.55■■■□□ 2.48
MCF2L2-210ENST00000478652 NBPF4Q96M43 638 aa30.55■■■□□ 2.48
MCF2L2-210ENST00000478652 STK32BQ9NY57 414 aa30.55■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms