RNA–Protein interactions for RNA: ENST00000478288.5

ABCF3-212, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 3

Gene ABCF3, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-212ENST00000478288 APBA3O96018 575 aa18.59■□□□□ 0.57
ABCF3-212ENST00000478288 USP54Q70EL1 1684 aa18.59■□□□□ 0.57
ABCF3-212ENST00000478288 KCNH5Q8NCM2 988 aa18.58■□□□□ 0.56
ABCF3-212ENST00000478288 TTC21BQ7Z4L5 1316 aa18.57■□□□□ 0.56
ABCF3-212ENST00000478288 R3HDM1Q15032 1099 aaKnown RBP18.57■□□□□ 0.56
ABCF3-212ENST00000478288 NFAT5O94916 1531 aa18.57■□□□□ 0.56
ABCF3-212ENST00000478288 WDR17Q8IZU2 1322 aa18.56■□□□□ 0.56
ABCF3-212ENST00000478288 RGPD5Q99666 1765 aa18.56■□□□□ 0.56
ABCF3-212ENST00000478288 ARHGEF25Q86VW2 580 aa18.56■□□□□ 0.56
ABCF3-212ENST00000478288 BCL9O00512 1426 aa18.56■□□□□ 0.56
ABCF3-212ENST00000478288 NEUROD1Q13562 356 aa18.55■□□□□ 0.56
ABCF3-212ENST00000478288 CDCA7Q9BWT1 371 aaPredicted RBP18.55■□□□□ 0.56
ABCF3-212ENST00000478288 KTN1Q86UP2 1357 aaKnown RBP18.54■□□□□ 0.56
ABCF3-212ENST00000478288 TOM1L2Q6ZVM7 507 aa18.53■□□□□ 0.56
ABCF3-212ENST00000478288 AXIN2Q9Y2T1 843 aa18.53■□□□□ 0.56
ABCF3-212ENST00000478288 DDB1Q16531 1140 aa18.52■□□□□ 0.56
ABCF3-212ENST00000478288 USP31Q70CQ4 1352 aa18.52■□□□□ 0.55
ABCF3-212ENST00000478288 ZBTB7CA1YPR0 619 aa18.51■□□□□ 0.55
ABCF3-212ENST00000478288 CARD10Q9BWT7 1032 aa18.51■□□□□ 0.55
ABCF3-212ENST00000478288 CD163L1Q9NR16 1453 aa18.51■□□□□ 0.55
ABCF3-212ENST00000478288 NBPF14Q5TI25 921 aa18.5■□□□□ 0.55
ABCF3-212ENST00000478288 PLSCR1O15162 318 aa18.49■□□□□ 0.55
ABCF3-212ENST00000478288 LTN1O94822 1766 aa18.48■□□□□ 0.55
ABCF3-212ENST00000478288 CCDC7Q96M83 1385 aa18.48■□□□□ 0.55
ABCF3-212ENST00000478288 PUS7Q96PZ0 661 aaKnown RBP18.48■□□□□ 0.55
ABCF3-212ENST00000478288 CARD11Q9BXL7 1154 aa18.48■□□□□ 0.55
ABCF3-212ENST00000478288 BCL11BQ9C0K0 894 aaPredicted RBP18.47■□□□□ 0.55
ABCF3-212ENST00000478288 EDC4Q6P2E9 1401 aaKnown RBP18.46■□□□□ 0.55
ABCF3-212ENST00000478288 TONSLQ96HA7 1378 aa18.45■□□□□ 0.54
ABCF3-212ENST00000478288 TNS2Q63HR2 1409 aa18.45■□□□□ 0.54
ABCF3-212ENST00000478288 CSB-PGBD3P0DP91 1061 aa18.44■□□□□ 0.54
ABCF3-212ENST00000478288 MARCH10Q8NA82 808 aaPredicted RBP18.44■□□□□ 0.54
ABCF3-212ENST00000478288 NINLQ9Y2I6 1382 aa18.43■□□□□ 0.54
ABCF3-212ENST00000478288 SOX12O15370 315 aa18.43■□□□□ 0.54
ABCF3-212ENST00000478288 ERBB3P21860 1342 aa18.43■□□□□ 0.54
ABCF3-212ENST00000478288 CASZ1Q86V15 1759 aa18.42■□□□□ 0.54
ABCF3-212ENST00000478288 HDGFL2Q7Z4V5 671 aaPredicted RBP18.42■□□□□ 0.54
ABCF3-212ENST00000478288 NHSQ6T4R5 1651 aa18.41■□□□□ 0.54
ABCF3-212ENST00000478288 SLC24A1O60721 1099 aa18.41■□□□□ 0.54
ABCF3-212ENST00000478288 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.41■□□□□ 0.54
ABCF3-212ENST00000478288 TERF2IPQ9NYB0 399 aa18.41■□□□□ 0.54
ABCF3-212ENST00000478288 A0A1W2PP64 1363 aa18.41■□□□□ 0.54
ABCF3-212ENST00000478288 FAM208AQ9UK61 1670 aaKnown RBP18.41■□□□□ 0.54
ABCF3-212ENST00000478288 EXOC5O00471 708 aa18.4■□□□□ 0.54
ABCF3-212ENST00000478288 NME9Q86XW9 330 aa18.4■□□□□ 0.54
ABCF3-212ENST00000478288 TMC1Q8TDI8 760 aa18.39■□□□□ 0.53
ABCF3-212ENST00000478288 SLC12A5Q9H2X9 1139 aa18.39■□□□□ 0.53
ABCF3-212ENST00000478288 SPON1Q9HCB6 807 aa18.39■□□□□ 0.53
ABCF3-212ENST00000478288 KCNQ2O43526 872 aa18.37■□□□□ 0.53
ABCF3-212ENST00000478288 PTF1AQ7RTS3 328 aa18.37■□□□□ 0.53
ABCF3-212ENST00000478288 KAT6BQ8WYB5 2073 aa18.37■□□□□ 0.53
ABCF3-212ENST00000478288 PROM2Q8N271 834 aa18.36■□□□□ 0.53
ABCF3-212ENST00000478288 TESK2Q96S53 571 aa18.36■□□□□ 0.53
ABCF3-212ENST00000478288 ANO8Q9HCE9 1232 aaPredicted RBP18.36■□□□□ 0.53
ABCF3-212ENST00000478288 IL2RBP14784 551 aa18.35■□□□□ 0.53
ABCF3-212ENST00000478288 UTRNP46939 3433 aa18.35■□□□□ 0.53
ABCF3-212ENST00000478288 NLRP2Q9NX02 1062 aa18.34■□□□□ 0.53
ABCF3-212ENST00000478288 BTAF1O14981 1849 aa18.33■□□□□ 0.53
ABCF3-212ENST00000478288 ANKRD24Q8TF21 1146 aa18.33■□□□□ 0.52
ABCF3-212ENST00000478288 PAPPAQ13219 1627 aa18.32■□□□□ 0.52
ABCF3-212ENST00000478288 TXNRD1Q16881 649 aa18.32■□□□□ 0.52
ABCF3-212ENST00000478288 IP6K1Q92551 441 aa18.32■□□□□ 0.52
ABCF3-212ENST00000478288 PPP1R1BQ9UD71 204 aaPredicted RBP18.32■□□□□ 0.52
ABCF3-212ENST00000478288 ST20-MTHFSA0A0A6YYL1 179 aa18.31■□□□□ 0.52
ABCF3-212ENST00000478288 ANKRD36BQ8N2N9 1353 aa18.3■□□□□ 0.52
ABCF3-212ENST00000478288 STK32BQ9NY57 414 aa18.29■□□□□ 0.52
ABCF3-212ENST00000478288 SLC15A2Q16348 729 aa18.28■□□□□ 0.52
ABCF3-212ENST00000478288 COG3Q96JB2 828 aa18.28■□□□□ 0.52
ABCF3-212ENST00000478288 RTL1A6NKG5 1358 aa18.28■□□□□ 0.52
ABCF3-212ENST00000478288 MYOM1P52179 1685 aa18.27■□□□□ 0.52
ABCF3-212ENST00000478288 QSER1Q2KHR3 1735 aa18.26■□□□□ 0.51
ABCF3-212ENST00000478288 MAP3K19Q56UN5 1328 aa18.25■□□□□ 0.51
ABCF3-212ENST00000478288 PTGER2P43116 358 aa18.25■□□□□ 0.51
ABCF3-212ENST00000478288 PDGFDQ9GZP0 370 aaPredicted RBP18.25■□□□□ 0.51
ABCF3-212ENST00000478288 SHANK3Q9BYB0 1731 aa18.25■□□□□ 0.51
ABCF3-212ENST00000478288 USP47Q96K76 1375 aa18.25■□□□□ 0.51
ABCF3-212ENST00000478288 RGPD2P0DJD1 1756 aa18.25■□□□□ 0.51
ABCF3-212ENST00000478288 HOXC9P31274 260 aa18.24■□□□□ 0.51
ABCF3-212ENST00000478288 ACSBG1Q96GR2 724 aa18.24■□□□□ 0.51
ABCF3-212ENST00000478288 DCAF8L1A6NGE4 600 aa18.23■□□□□ 0.51
ABCF3-212ENST00000478288 TMF1P82094 1093 aa18.23■□□□□ 0.51
ABCF3-212ENST00000478288 MTFR1LQ9H019 292 aa18.23■□□□□ 0.51
ABCF3-212ENST00000478288 KIF20BQ96Q89 1820 aa18.23■□□□□ 0.51
ABCF3-212ENST00000478288 ZBTB7AO95365 584 aa18.22■□□□□ 0.51
ABCF3-212ENST00000478288 TRIM26Q12899 539 aaPredicted RBP18.22■□□□□ 0.51
ABCF3-212ENST00000478288 DOT1LQ8TEK3 1739 aa18.22■□□□□ 0.51
ABCF3-212ENST00000478288 AMPHP49418 695 aa18.21■□□□□ 0.51
ABCF3-212ENST00000478288 CDCA8Q53HL2 280 aa18.21■□□□□ 0.51
ABCF3-212ENST00000478288 SLC27A3Q5K4L6 730 aa18.21■□□□□ 0.51
ABCF3-212ENST00000478288 LY75O60449 1722 aa18.2■□□□□ 0.5
ABCF3-212ENST00000478288 KIF24Q5T7B8 1368 aa18.2■□□□□ 0.5
ABCF3-212ENST00000478288 SGIP1Q9BQI5 828 aa18.2■□□□□ 0.5
ABCF3-212ENST00000478288 GOLGB1Q14789 3259 aaKnown RBP18.2■□□□□ 0.5
ABCF3-212ENST00000478288 CGNL1Q0VF96 1302 aa18.2■□□□□ 0.5
ABCF3-212ENST00000478288 YY1P25490 414 aa18.19■□□□□ 0.5
ABCF3-212ENST00000478288 COL24A1Q17RW2 1714 aa18.19■□□□□ 0.5
ABCF3-212ENST00000478288 LTV1Q96GA3 475 aaPredicted RBP18.19■□□□□ 0.5
ABCF3-212ENST00000478288 MEGF6O75095 1541 aa18.18■□□□□ 0.5
ABCF3-212ENST00000478288 SMG6Q86US8 1419 aaKnown RBP18.18■□□□□ 0.5
ABCF3-212ENST00000478288 FYB1O15117 783 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms