RNA–Protein interactions for RNA: ENST00000478264.1

PLOD3-213, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 663 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-213ENST00000478264 FLT4P35916 1363 aa24.67■■□□□ 1.54
PLOD3-213ENST00000478264 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.67■■□□□ 1.54
PLOD3-213ENST00000478264 PEAK1Q9H792 1746 aa24.67■■□□□ 1.54
PLOD3-213ENST00000478264 CAMTA1Q9Y6Y1 1673 aa24.67■■□□□ 1.54
PLOD3-213ENST00000478264 AMPHP49418 695 aa24.67■■□□□ 1.54
PLOD3-213ENST00000478264 BTG4Q9NY30 223 aa24.67■■□□□ 1.54
PLOD3-213ENST00000478264 POLKQ9UBT6 870 aa24.67■■□□□ 1.54
PLOD3-213ENST00000478264 EMILIN1Q9Y6C2 1016 aa24.67■■□□□ 1.54
PLOD3-213ENST00000478264 HOXC9P31274 260 aa24.66■■□□□ 1.54
PLOD3-213ENST00000478264 RALBP1Q15311 655 aa24.66■■□□□ 1.54
PLOD3-213ENST00000478264 IP6K1Q92551 441 aa24.66■■□□□ 1.54
PLOD3-213ENST00000478264 COL5A2P05997 1499 aaPredicted RBP24.65■■□□□ 1.54
PLOD3-213ENST00000478264 BCL9LQ86UU0 1499 aa24.65■■□□□ 1.54
PLOD3-213ENST00000478264 PHF23Q9BUL5 403 aaPredicted RBP24.64■■□□□ 1.54
PLOD3-213ENST00000478264 USP21Q9UK80 565 aa24.64■■□□□ 1.54
PLOD3-213ENST00000478264 AXIN2Q9Y2T1 843 aa24.64■■□□□ 1.54
PLOD3-213ENST00000478264 CDK12Q9NYV4 1490 aaPredicted RBP24.64■■□□□ 1.53
PLOD3-213ENST00000478264 UNC5CLQ8IV45 518 aa24.63■■□□□ 1.53
PLOD3-213ENST00000478264 PPM1GO15355 546 aaPredicted RBP24.62■■□□□ 1.53
PLOD3-213ENST00000478264 ZNF772Q68DY9 489 aaPredicted RBP24.62■■□□□ 1.53
PLOD3-213ENST00000478264 RGPD5Q99666 1765 aa24.62■■□□□ 1.53
PLOD3-213ENST00000478264 PRKRIP1Q9H875 184 aaPredicted RBP24.61■■□□□ 1.53
PLOD3-213ENST00000478264 INSRP06213 1382 aa24.61■■□□□ 1.53
PLOD3-213ENST00000478264 PPP2R1AP30153 589 aa24.6■■□□□ 1.53
PLOD3-213ENST00000478264 ERBB3P21860 1342 aa24.6■■□□□ 1.53
PLOD3-213ENST00000478264 STRN4Q9NRL3 753 aa24.59■■□□□ 1.53
PLOD3-213ENST00000478264 MTHFSP49914 203 aa24.58■■□□□ 1.53
PLOD3-213ENST00000478264 EVA1CP58658 441 aa24.58■■□□□ 1.53
PLOD3-213ENST00000478264 HSP90AB2PQ58FF8 381 aa24.58■■□□□ 1.53
PLOD3-213ENST00000478264 ATRNO75882 1429 aa24.58■■□□□ 1.53
PLOD3-213ENST00000478264 FAM208AQ9UK61 1670 aaKnown RBP24.57■■□□□ 1.52
PLOD3-213ENST00000478264 ANP32CO43423 234 aa24.57■■□□□ 1.52
PLOD3-213ENST00000478264 ANKRD24Q8TF21 1146 aa24.57■■□□□ 1.52
PLOD3-213ENST00000478264 WDR17Q8IZU2 1322 aa24.57■■□□□ 1.52
PLOD3-213ENST00000478264 MYBBP1AQ9BQG0 1328 aaKnown RBP24.57■■□□□ 1.52
PLOD3-213ENST00000478264 TRPC5Q9UL62 973 aaPredicted RBP24.56■■□□□ 1.52
PLOD3-213ENST00000478264 CSB-PGBD3P0DP91 1061 aa24.55■■□□□ 1.52
PLOD3-213ENST00000478264 VPS72Q15906 364 aa24.55■■□□□ 1.52
PLOD3-213ENST00000478264 RGS17Q9UGC6 210 aaPredicted RBP24.55■■□□□ 1.52
PLOD3-213ENST00000478264 CRB1P82279 1406 aa24.54■■□□□ 1.52
PLOD3-213ENST00000478264 SOCS7O14512 581 aa24.54■■□□□ 1.52
PLOD3-213ENST00000478264 LARP1Q6PKG0 1096 aaKnown RBP24.53■■□□□ 1.52
PLOD3-213ENST00000478264 LTV1Q96GA3 475 aaPredicted RBP24.53■■□□□ 1.52
PLOD3-213ENST00000478264 COL3A1P02461 1466 aaPredicted RBP24.51■■□□□ 1.51
PLOD3-213ENST00000478264 TOM1L2Q6ZVM7 507 aa24.51■■□□□ 1.51
PLOD3-213ENST00000478264 CFAP53Q96M91 514 aa24.51■■□□□ 1.51
PLOD3-213ENST00000478264 QTRT2Q9H974 415 aaKnown RBP24.51■■□□□ 1.51
PLOD3-213ENST00000478264 CCDC9Q9Y3X0 531 aaKnown RBP24.5■■□□□ 1.51
PLOD3-213ENST00000478264 SPATA31A5Q5VU36 1347 aa24.5■■□□□ 1.51
PLOD3-213ENST00000478264 SPATA31A7Q8IWB4 1347 aa24.5■■□□□ 1.51
PLOD3-213ENST00000478264 EIF4A2Q14240 407 aaKnown RBP24.49■■□□□ 1.51
PLOD3-213ENST00000478264 DIEXFQ68CQ4 756 aaKnown RBP24.49■■□□□ 1.51
PLOD3-213ENST00000478264 GLI3P10071 1580 aa24.49■■□□□ 1.51
PLOD3-213ENST00000478264 SPATA31A1Q5TZJ5 1347 aa24.48■■□□□ 1.51
PLOD3-213ENST00000478264 GJD4Q96KN9 370 aaPredicted RBP24.48■■□□□ 1.51
PLOD3-213ENST00000478264 CARD10Q9BWT7 1032 aa24.48■■□□□ 1.51
PLOD3-213ENST00000478264 NLRP2Q9NX02 1062 aa24.47■■□□□ 1.51
PLOD3-213ENST00000478264 POTEAQ6S8J7 498 aa24.46■■□□□ 1.51
PLOD3-213ENST00000478264 DIAPH1O60610 1272 aaKnown RBP24.45■■□□□ 1.5
PLOD3-213ENST00000478264 RBM6P78332 1123 aaKnown RBP24.45■■□□□ 1.5
PLOD3-213ENST00000478264 THRAP3Q9Y2W1 955 aaKnown RBP24.45■■□□□ 1.5
PLOD3-213ENST00000478264 RGPD2P0DJD1 1756 aa24.44■■□□□ 1.5
PLOD3-213ENST00000478264 IL13P35225 146 aa24.44■■□□□ 1.5
PLOD3-213ENST00000478264 TCP11L2Q8N4U5 519 aa24.44■■□□□ 1.5
PLOD3-213ENST00000478264 USP35Q9P2H5 1018 aa24.44■■□□□ 1.5
PLOD3-213ENST00000478264 RGPD1P0DJD0 1748 aa24.44■■□□□ 1.5
PLOD3-213ENST00000478264 NCAPD2Q15021 1401 aa24.44■■□□□ 1.5
PLOD3-213ENST00000478264 NBPF6Q5VWK0 638 aa24.43■■□□□ 1.5
PLOD3-213ENST00000478264 NBPF4Q96M43 638 aa24.43■■□□□ 1.5
PLOD3-213ENST00000478264 WNK3Q9BYP7 1800 aa24.42■■□□□ 1.5
PLOD3-213ENST00000478264 IGSF1Q8N6C5 1336 aa24.42■■□□□ 1.5
PLOD3-213ENST00000478264 RXRBP28702 533 aa24.42■■□□□ 1.5
PLOD3-213ENST00000478264 BARGINQ6ZT62 677 aa24.41■■□□□ 1.5
PLOD3-213ENST00000478264 EYA1Q99502 592 aa24.41■■□□□ 1.5
PLOD3-213ENST00000478264 USHBP1Q8N6Y0 703 aa24.39■■□□□ 1.49
PLOD3-213ENST00000478264 NUDCQ9Y266 331 aa24.39■■□□□ 1.49
PLOD3-213ENST00000478264 DISP2A7MBM2 1401 aa24.38■■□□□ 1.49
PLOD3-213ENST00000478264 THSD7AQ9UPZ6 1657 aa24.38■■□□□ 1.49
PLOD3-213ENST00000478264 FAM98CQ17RN3 349 aaKnown RBP24.38■■□□□ 1.49
PLOD3-213ENST00000478264 CDCA7Q9BWT1 371 aaPredicted RBP24.37■■□□□ 1.49
PLOD3-213ENST00000478264 ONECUT3O60422 494 aaPredicted RBP24.36■■□□□ 1.49
PLOD3-213ENST00000478264 KDRP35968 1356 aa24.35■■□□□ 1.49
PLOD3-213ENST00000478264 U2SURPO15042 1029 aaKnown RBP24.35■■□□□ 1.49
PLOD3-213ENST00000478264 IL2RBP14784 551 aa24.35■■□□□ 1.49
PLOD3-213ENST00000478264 PARP4Q9UKK3 1724 aaKnown RBP24.35■■□□□ 1.49
PLOD3-213ENST00000478264 MEGF6O75095 1541 aa24.34■■□□□ 1.49
PLOD3-213ENST00000478264 RGS12O14924 1447 aa24.34■■□□□ 1.49
PLOD3-213ENST00000478264 RAPGEF4Q8WZA2 1011 aa24.33■■□□□ 1.49
PLOD3-213ENST00000478264 LRRC37A3O60309 1634 aa24.32■■□□□ 1.48
PLOD3-213ENST00000478264 PLEKHG2Q9H7P9 1386 aa24.32■■□□□ 1.48
PLOD3-213ENST00000478264 A0A0G2JS52 829 aa24.32■■□□□ 1.48
PLOD3-213ENST00000478264 MYT1Q01538 1121 aa24.32■■□□□ 1.48
PLOD3-213ENST00000478264 SULT6B1Q6IMI4 303 aa24.32■■□□□ 1.48
PLOD3-213ENST00000478264 OVOS2A0A0G2JMS6 1433 aa24.31■■□□□ 1.48
PLOD3-213ENST00000478264 U2AF1L5P0DN76 240 aaPredicted RBP24.3■■□□□ 1.48
PLOD3-213ENST00000478264 TATP17735 454 aaPredicted RBP24.3■■□□□ 1.48
PLOD3-213ENST00000478264 U2AF1Q01081 240 aaKnown RBP eCLIP24.3■■□□□ 1.48
PLOD3-213ENST00000478264 AEBP1Q8IUX7 1158 aa24.3■■□□□ 1.48
PLOD3-213ENST00000478264 SEPT12Q8IYM1 358 aa24.3■■□□□ 1.48
PLOD3-213ENST00000478264 MRS2Q9HD23 443 aa24.3■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms