RNA–Protein interactions for RNA: ENST00000478171.1

PLXNB1-214, Transcript of plexin B1, humanhuman

TSL 3

Gene PLXNB1, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNB1-214ENST00000478171 WDR17Q8IZU2 1322 aa23.21■■□□□ 1.31
PLXNB1-214ENST00000478171 RGPD5Q99666 1765 aa23.2■■□□□ 1.3
PLXNB1-214ENST00000478171 PTF1AQ7RTS3 328 aa23.2■■□□□ 1.3
PLXNB1-214ENST00000478171 MON2Q7Z3U7 1717 aa23.19■■□□□ 1.3
PLXNB1-214ENST00000478171 DDB1Q16531 1140 aa23.19■■□□□ 1.3
PLXNB1-214ENST00000478171 ARHGEF25Q86VW2 580 aa23.19■■□□□ 1.3
PLXNB1-214ENST00000478171 KTN1Q86UP2 1357 aaKnown RBP23.18■■□□□ 1.3
PLXNB1-214ENST00000478171 SBF2Q86WG5 1849 aa23.18■■□□□ 1.3
PLXNB1-214ENST00000478171 TTC21AQ8NDW8 1320 aa23.16■■□□□ 1.3
PLXNB1-214ENST00000478171 CD163L1Q9NR16 1453 aa23.16■■□□□ 1.3
PLXNB1-214ENST00000478171 CSB-PGBD3P0DP91 1061 aa23.15■■□□□ 1.3
PLXNB1-214ENST00000478171 MARCH10Q8NA82 808 aaPredicted RBP23.15■■□□□ 1.3
PLXNB1-214ENST00000478171 ZNF692Q9BU19 519 aaPredicted RBP23.15■■□□□ 1.3
PLXNB1-214ENST00000478171 NBPF14Q5TI25 921 aa23.14■■□□□ 1.29
PLXNB1-214ENST00000478171 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.14■■□□□ 1.29
PLXNB1-214ENST00000478171 KCNH5Q8NCM2 988 aa23.14■■□□□ 1.29
PLXNB1-214ENST00000478171 ANO8Q9HCE9 1232 aaPredicted RBP23.14■■□□□ 1.29
PLXNB1-214ENST00000478171 RGPD3A6NKT7 1758 aaPredicted RBP23.14■■□□□ 1.29
PLXNB1-214ENST00000478171 RGPD4Q7Z3J3 1758 aa23.14■■□□□ 1.29
PLXNB1-214ENST00000478171 SBNO2Q9Y2G9 1366 aa23.13■■□□□ 1.29
PLXNB1-214ENST00000478171 NME9Q86XW9 330 aa23.12■■□□□ 1.29
PLXNB1-214ENST00000478171 CARD10Q9BWT7 1032 aa23.11■■□□□ 1.29
PLXNB1-214ENST00000478171 CARD11Q9BXL7 1154 aa23.11■■□□□ 1.29
PLXNB1-214ENST00000478171 USP54Q70EL1 1684 aa23.1■■□□□ 1.29
PLXNB1-214ENST00000478171 ABCC6O95255 1503 aa23.1■■□□□ 1.29
PLXNB1-214ENST00000478171 TNS2Q63HR2 1409 aa23.09■■□□□ 1.29
PLXNB1-214ENST00000478171 C11orf95C9JLR9 678 aaPredicted RBP23.08■■□□□ 1.29
PLXNB1-214ENST00000478171 BCL11BQ9C0K0 894 aaPredicted RBP23.08■■□□□ 1.29
PLXNB1-214ENST00000478171 USP31Q70CQ4 1352 aa23.08■■□□□ 1.29
PLXNB1-214ENST00000478171 TMC1Q8TDI8 760 aa23.07■■□□□ 1.28
PLXNB1-214ENST00000478171 BCL9O00512 1426 aa23.07■■□□□ 1.28
PLXNB1-214ENST00000478171 CASZ1Q86V15 1759 aa23.06■■□□□ 1.28
PLXNB1-214ENST00000478171 CCDC7Q96M83 1385 aa23.06■■□□□ 1.28
PLXNB1-214ENST00000478171 CDCA7Q9BWT1 371 aaPredicted RBP23.06■■□□□ 1.28
PLXNB1-214ENST00000478171 LTN1O94822 1766 aa23.06■■□□□ 1.28
PLXNB1-214ENST00000478171 PLSCR1O15162 318 aa23.05■■□□□ 1.28
PLXNB1-214ENST00000478171 PROM2Q8N271 834 aa23.05■■□□□ 1.28
PLXNB1-214ENST00000478171 PDGFDQ9GZP0 370 aaPredicted RBP23.05■■□□□ 1.28
PLXNB1-214ENST00000478171 SLC12A5Q9H2X9 1139 aa23.05■■□□□ 1.28
PLXNB1-214ENST00000478171 ERBB3P21860 1342 aa23.05■■□□□ 1.28
PLXNB1-214ENST00000478171 A0A1W2PP64 1363 aa23.04■■□□□ 1.28
PLXNB1-214ENST00000478171 TONSLQ96HA7 1378 aa23.04■■□□□ 1.28
PLXNB1-214ENST00000478171 EDC4Q6P2E9 1401 aaKnown RBP23.03■■□□□ 1.28
PLXNB1-214ENST00000478171 KCNQ2O43526 872 aa23.03■■□□□ 1.28
PLXNB1-214ENST00000478171 SPON1Q9HCB6 807 aa23.03■■□□□ 1.28
PLXNB1-214ENST00000478171 NLRP2Q9NX02 1062 aa23.02■■□□□ 1.28
PLXNB1-214ENST00000478171 PPP1R1BQ9UD71 204 aaPredicted RBP23.02■■□□□ 1.28
PLXNB1-214ENST00000478171 NHSQ6T4R5 1651 aa23.01■■□□□ 1.27
PLXNB1-214ENST00000478171 EXOC5O00471 708 aa23.01■■□□□ 1.27
PLXNB1-214ENST00000478171 HDGFL2Q7Z4V5 671 aaPredicted RBP23.01■■□□□ 1.27
PLXNB1-214ENST00000478171 ACSBG1Q96GR2 724 aa22.99■■□□□ 1.27
PLXNB1-214ENST00000478171 ZBTB7AO95365 584 aa22.98■■□□□ 1.27
PLXNB1-214ENST00000478171 TXNRD1Q16881 649 aa22.98■■□□□ 1.27
PLXNB1-214ENST00000478171 ANKRD24Q8TF21 1146 aa22.98■■□□□ 1.27
PLXNB1-214ENST00000478171 MYOM1P52179 1685 aa22.97■■□□□ 1.27
PLXNB1-214ENST00000478171 NINLQ9Y2I6 1382 aa22.95■■□□□ 1.26
PLXNB1-214ENST00000478171 IL2RBP14784 551 aa22.94■■□□□ 1.26
PLXNB1-214ENST00000478171 TESK2Q96S53 571 aa22.94■■□□□ 1.26
PLXNB1-214ENST00000478171 TERF2IPQ9NYB0 399 aa22.94■■□□□ 1.26
PLXNB1-214ENST00000478171 PAPPAQ13219 1627 aa22.93■■□□□ 1.26
PLXNB1-214ENST00000478171 STK32BQ9NY57 414 aa22.93■■□□□ 1.26
PLXNB1-214ENST00000478171 LTV1Q96GA3 475 aaPredicted RBP22.92■■□□□ 1.26
PLXNB1-214ENST00000478171 ATF5Q9Y2D1 282 aaPredicted RBP22.92■■□□□ 1.26
PLXNB1-214ENST00000478171 BTAF1O14981 1849 aa22.92■■□□□ 1.26
PLXNB1-214ENST00000478171 ST20-MTHFSA0A0A6YYL1 179 aa22.91■■□□□ 1.26
PLXNB1-214ENST00000478171 FBLN1P23142 703 aa22.9■■□□□ 1.26
PLXNB1-214ENST00000478171 PTGER2P43116 358 aa22.9■■□□□ 1.26
PLXNB1-214ENST00000478171 SLC15A2Q16348 729 aa22.9■■□□□ 1.26
PLXNB1-214ENST00000478171 YY1P25490 414 aa22.89■■□□□ 1.25
PLXNB1-214ENST00000478171 FAM208AQ9UK61 1670 aaKnown RBP22.87■■□□□ 1.25
PLXNB1-214ENST00000478171 MAP3K19Q56UN5 1328 aa22.87■■□□□ 1.25
PLXNB1-214ENST00000478171 IP6K1Q92551 441 aa22.87■■□□□ 1.25
PLXNB1-214ENST00000478171 ZNF827Q17R98 1081 aa22.86■■□□□ 1.25
PLXNB1-214ENST00000478171 PUS7Q96PZ0 661 aaKnown RBP22.86■■□□□ 1.25
PLXNB1-214ENST00000478171 COG3Q96JB2 828 aa22.84■■□□□ 1.25
PLXNB1-214ENST00000478171 LRRC4BQ9NT99 713 aa22.84■■□□□ 1.25
PLXNB1-214ENST00000478171 RGPD2P0DJD1 1756 aa22.84■■□□□ 1.25
PLXNB1-214ENST00000478171 MEGF6O75095 1541 aa22.83■■□□□ 1.25
PLXNB1-214ENST00000478171 HOXC9P31274 260 aa22.83■■□□□ 1.25
PLXNB1-214ENST00000478171 DDX54Q8TDD1 881 aaKnown RBP22.83■■□□□ 1.25
PLXNB1-214ENST00000478171 ANKRD36BQ8N2N9 1353 aa22.83■■□□□ 1.25
PLXNB1-214ENST00000478171 DOT1LQ8TEK3 1739 aa22.82■■□□□ 1.24
PLXNB1-214ENST00000478171 SHANK3Q9BYB0 1731 aa22.82■■□□□ 1.24
PLXNB1-214ENST00000478171 SGIP1Q9BQI5 828 aa22.81■■□□□ 1.24
PLXNB1-214ENST00000478171 FHDC1Q9C0D6 1143 aaPredicted RBP22.81■■□□□ 1.24
PLXNB1-214ENST00000478171 MTFR1LQ9H019 292 aa22.81■■□□□ 1.24
PLXNB1-214ENST00000478171 USP47Q96K76 1375 aa22.8■■□□□ 1.24
PLXNB1-214ENST00000478171 RRS1Q15050 365 aaKnown RBP22.8■■□□□ 1.24
PLXNB1-214ENST00000478171 AMPHP49418 695 aa22.79■■□□□ 1.24
PLXNB1-214ENST00000478171 KCNQ4P56696 695 aa22.78■■□□□ 1.24
PLXNB1-214ENST00000478171 GGNBP2Q9H3C7 697 aa22.78■■□□□ 1.24
PLXNB1-214ENST00000478171 NSD2O96028 1365 aa22.77■■□□□ 1.24
PLXNB1-214ENST00000478171 KAT6BQ8WYB5 2073 aa22.77■■□□□ 1.24
PLXNB1-214ENST00000478171 DCAF8L1A6NGE4 600 aa22.77■■□□□ 1.24
PLXNB1-214ENST00000478171 USHBP1Q8N6Y0 703 aa22.77■■□□□ 1.24
PLXNB1-214ENST00000478171 SYTL4Q96C24 671 aaPredicted RBP22.76■■□□□ 1.23
PLXNB1-214ENST00000478171 RTL1A6NKG5 1358 aa22.76■■□□□ 1.23
PLXNB1-214ENST00000478171 SYT17Q9BSW7 474 aa22.75■■□□□ 1.23
PLXNB1-214ENST00000478171 TUBGCP6Q96RT7 1819 aa22.75■■□□□ 1.23
PLXNB1-214ENST00000478171 PRIM1P49642 420 aaKnown RBP22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms