RNA–Protein interactions for RNA: ENST00000478082.5

PLOD3-212, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 1,585 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-212ENST00000478082 CDK12Q9NYV4 1490 aaPredicted RBP25.79■■□□□ 1.72
PLOD3-212ENST00000478082 LARP1Q6PKG0 1096 aaKnown RBP25.79■■□□□ 1.72
PLOD3-212ENST00000478082 RGPD5Q99666 1765 aa25.79■■□□□ 1.72
PLOD3-212ENST00000478082 SPATA31A5Q5VU36 1347 aa25.77■■□□□ 1.72
PLOD3-212ENST00000478082 SPATA31A7Q8IWB4 1347 aa25.77■■□□□ 1.72
PLOD3-212ENST00000478082 EVA1CP58658 441 aa25.77■■□□□ 1.72
PLOD3-212ENST00000478082 CGNL1Q0VF96 1302 aa25.75■■□□□ 1.71
PLOD3-212ENST00000478082 USP35Q9P2H5 1018 aa25.74■■□□□ 1.71
PLOD3-212ENST00000478082 MAP3K19Q56UN5 1328 aa25.74■■□□□ 1.71
PLOD3-212ENST00000478082 SOCS7O14512 581 aa25.73■■□□□ 1.71
PLOD3-212ENST00000478082 RRS1Q15050 365 aaKnown RBP25.73■■□□□ 1.71
PLOD3-212ENST00000478082 FAM98CQ17RN3 349 aaKnown RBP25.73■■□□□ 1.71
PLOD3-212ENST00000478082 SPATA31A1Q5TZJ5 1347 aa25.73■■□□□ 1.71
PLOD3-212ENST00000478082 SEPT12Q8IYM1 358 aa25.69■■□□□ 1.7
PLOD3-212ENST00000478082 ABCC6O95255 1503 aa25.69■■□□□ 1.7
PLOD3-212ENST00000478082 ONECUT3O60422 494 aaPredicted RBP25.68■■□□□ 1.7
PLOD3-212ENST00000478082 CRB1P82279 1406 aa25.68■■□□□ 1.7
PLOD3-212ENST00000478082 BRWD3Q6RI45 1802 aa25.67■■□□□ 1.7
PLOD3-212ENST00000478082 PER1O15534 1290 aaPredicted RBP25.67■■□□□ 1.7
PLOD3-212ENST00000478082 ZEB1P37275 1124 aaPredicted RBP25.67■■□□□ 1.7
PLOD3-212ENST00000478082 PEAK1Q9H792 1746 aa25.67■■□□□ 1.7
PLOD3-212ENST00000478082 ANKRD26Q9UPS8 1709 aa25.67■■□□□ 1.7
PLOD3-212ENST00000478082 WDR17Q8IZU2 1322 aa25.67■■□□□ 1.7
PLOD3-212ENST00000478082 TNNT2P45379 298 aaPredicted RBP25.66■■□□□ 1.7
PLOD3-212ENST00000478082 TOM1L2Q6ZVM7 507 aa25.66■■□□□ 1.7
PLOD3-212ENST00000478082 KNSTRNQ9Y448 316 aa25.66■■□□□ 1.7
PLOD3-212ENST00000478082 A0A0G2JS52 829 aa25.65■■□□□ 1.7
PLOD3-212ENST00000478082 HOXC9P31274 260 aa25.65■■□□□ 1.7
PLOD3-212ENST00000478082 MYT1Q01538 1121 aa25.65■■□□□ 1.7
PLOD3-212ENST00000478082 AMER1Q5JTC6 1135 aaPredicted RBP25.65■■□□□ 1.7
PLOD3-212ENST00000478082 IP6K1Q92551 441 aa25.65■■□□□ 1.7
PLOD3-212ENST00000478082 THSD7AQ9UPZ6 1657 aa25.65■■□□□ 1.7
PLOD3-212ENST00000478082 CSB-PGBD3P0DP91 1061 aa25.65■■□□□ 1.7
PLOD3-212ENST00000478082 EMILIN1Q9Y6C2 1016 aa25.65■■□□□ 1.7
PLOD3-212ENST00000478082 ERBB3P21860 1342 aa25.64■■□□□ 1.7
PLOD3-212ENST00000478082 AMPHP49418 695 aa25.64■■□□□ 1.69
PLOD3-212ENST00000478082 ANKRD24Q8TF21 1146 aa25.64■■□□□ 1.69
PLOD3-212ENST00000478082 LTV1Q96GA3 475 aaPredicted RBP25.64■■□□□ 1.69
PLOD3-212ENST00000478082 TCP11L2Q8N4U5 519 aa25.63■■□□□ 1.69
PLOD3-212ENST00000478082 EP400Q96L91 3159 aa25.62■■□□□ 1.69
PLOD3-212ENST00000478082 BLMP54132 1417 aaPredicted RBP25.62■■□□□ 1.69
PLOD3-212ENST00000478082 NSD2O96028 1365 aa25.6■■□□□ 1.69
PLOD3-212ENST00000478082 CNGB1Q14028 1251 aaPredicted RBP25.6■■□□□ 1.69
PLOD3-212ENST00000478082 HSP90AB2PQ58FF8 381 aa25.6■■□□□ 1.69
PLOD3-212ENST00000478082 BARGINQ6ZT62 677 aa25.6■■□□□ 1.69
PLOD3-212ENST00000478082 RTL1A6NKG5 1358 aa25.59■■□□□ 1.69
PLOD3-212ENST00000478082 CARD10Q9BWT7 1032 aa25.58■■□□□ 1.69
PLOD3-212ENST00000478082 MAP2P11137 1827 aaKnown RBP25.57■■□□□ 1.68
PLOD3-212ENST00000478082 PPM1GO15355 546 aaPredicted RBP25.57■■□□□ 1.68
PLOD3-212ENST00000478082 CC2D1BQ5T0F9 858 aaKnown RBP25.57■■□□□ 1.68
PLOD3-212ENST00000478082 FAM182BQ5T319 152 aa25.57■■□□□ 1.68
PLOD3-212ENST00000478082 MORC1Q86VD1 984 aa25.57■■□□□ 1.68
PLOD3-212ENST00000478082 NLRP2Q9NX02 1062 aa25.57■■□□□ 1.68
PLOD3-212ENST00000478082 POLKQ9UBT6 870 aa25.57■■□□□ 1.68
PLOD3-212ENST00000478082 THRAP3Q9Y2W1 955 aaKnown RBP25.56■■□□□ 1.68
PLOD3-212ENST00000478082 KRT27Q7Z3Y8 459 aa25.56■■□□□ 1.68
PLOD3-212ENST00000478082 RGPD2P0DJD1 1756 aa25.56■■□□□ 1.68
PLOD3-212ENST00000478082 FLT4P35916 1363 aa25.55■■□□□ 1.68
PLOD3-212ENST00000478082 WNK3Q9BYP7 1800 aa25.55■■□□□ 1.68
PLOD3-212ENST00000478082 UPF1Q92900 1129 aaKnown RBP eCLIP25.54■■□□□ 1.68
PLOD3-212ENST00000478082 INSRP06213 1382 aa25.53■■□□□ 1.68
PLOD3-212ENST00000478082 DISP2A7MBM2 1401 aa25.52■■□□□ 1.68
PLOD3-212ENST00000478082 LRRC37A3O60309 1634 aa25.51■■□□□ 1.68
PLOD3-212ENST00000478082 PARP4Q9UKK3 1724 aaKnown RBP25.51■■□□□ 1.67
PLOD3-212ENST00000478082 KIF24Q5T7B8 1368 aa25.51■■□□□ 1.67
PLOD3-212ENST00000478082 FAM208AQ9UK61 1670 aaKnown RBP25.49■■□□□ 1.67
PLOD3-212ENST00000478082 NBPF6Q5VWK0 638 aa25.49■■□□□ 1.67
PLOD3-212ENST00000478082 USHBP1Q8N6Y0 703 aa25.49■■□□□ 1.67
PLOD3-212ENST00000478082 NBPF4Q96M43 638 aa25.49■■□□□ 1.67
PLOD3-212ENST00000478082 SMG6Q86US8 1419 aaKnown RBP25.48■■□□□ 1.67
PLOD3-212ENST00000478082 NPC1L1Q9UHC9 1359 aa25.46■■□□□ 1.67
PLOD3-212ENST00000478082 DDX10Q13206 875 aaKnown RBP25.44■■□□□ 1.66
PLOD3-212ENST00000478082 PDE3BQ13370 1112 aa25.44■■□□□ 1.66
PLOD3-212ENST00000478082 DDB1Q16531 1140 aa25.44■■□□□ 1.66
PLOD3-212ENST00000478082 IL2RBP14784 551 aa25.43■■□□□ 1.66
PLOD3-212ENST00000478082 EIF4A2Q14240 407 aaKnown RBP25.43■■□□□ 1.66
PLOD3-212ENST00000478082 MEGF6O75095 1541 aa25.41■■□□□ 1.66
PLOD3-212ENST00000478082 CDCA7Q9BWT1 371 aaPredicted RBP25.41■■□□□ 1.66
PLOD3-212ENST00000478082 MARCH10Q8NA82 808 aaPredicted RBP25.4■■□□□ 1.66
PLOD3-212ENST00000478082 MTHFSP49914 203 aa25.39■■□□□ 1.66
PLOD3-212ENST00000478082 TNS2Q63HR2 1409 aa25.39■■□□□ 1.66
PLOD3-212ENST00000478082 EYA1Q99502 592 aa25.39■■□□□ 1.65
PLOD3-212ENST00000478082 EXOC5O00471 708 aa25.37■■□□□ 1.65
PLOD3-212ENST00000478082 NCAPD2Q15021 1401 aa25.35■■□□□ 1.65
PLOD3-212ENST00000478082 FAM196AQ6ZSG2 479 aa25.34■■□□□ 1.65
PLOD3-212ENST00000478082 OVOS2A0A0G2JMS6 1433 aa25.33■■□□□ 1.65
PLOD3-212ENST00000478082 SHANK3Q9BYB0 1731 aa25.33■■□□□ 1.65
PLOD3-212ENST00000478082 TRIM37O94972 964 aa25.32■■□□□ 1.64
PLOD3-212ENST00000478082 IL13P35225 146 aa25.31■■□□□ 1.64
PLOD3-212ENST00000478082 PTF1AQ7RTS3 328 aa25.31■■□□□ 1.64
PLOD3-212ENST00000478082 DEFB132Q7Z7B7 95 aa25.31■■□□□ 1.64
PLOD3-212ENST00000478082 IGSF1Q8N6C5 1336 aa25.3■■□□□ 1.64
PLOD3-212ENST00000478082 TNS1Q9HBL0 1735 aaKnown RBP25.3■■□□□ 1.64
PLOD3-212ENST00000478082 DDX54Q8TDD1 881 aaKnown RBP25.3■■□□□ 1.64
PLOD3-212ENST00000478082 RAPGEF4Q8WZA2 1011 aa25.3■■□□□ 1.64
PLOD3-212ENST00000478082 PPP2R1AP30153 589 aa25.29■■□□□ 1.64
PLOD3-212ENST00000478082 COL3A1P02461 1466 aaPredicted RBP25.29■■□□□ 1.64
PLOD3-212ENST00000478082 RGPD1P0DJD0 1748 aa25.29■■□□□ 1.64
PLOD3-212ENST00000478082 ZNF316A6NFI3 1004 aaPredicted RBP25.28■■□□□ 1.64
PLOD3-212ENST00000478082 TATP17735 454 aaPredicted RBP25.28■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms