RNA–Protein interactions for RNA: ENST00000478021.1

TRAF4-211, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-211ENST00000478021 OVOS2A0A0J9YW53 1432 aa31.68■■■□□ 2.66
TRAF4-211ENST00000478021 OVOS2Q6IE36 1432 aa31.68■■■□□ 2.66
TRAF4-211ENST00000478021 POLR3GLQ9BT43 218 aa31.68■■■□□ 2.66
TRAF4-211ENST00000478021 LTN1O94822 1766 aa31.67■■■□□ 2.66
TRAF4-211ENST00000478021 AXIN2Q9Y2T1 843 aa31.66■■■□□ 2.66
TRAF4-211ENST00000478021 KRT27Q7Z3Y8 459 aa31.64■■■□□ 2.66
TRAF4-211ENST00000478021 KIF20BQ96Q89 1820 aa31.61■■■□□ 2.65
TRAF4-211ENST00000478021 CRB1P82279 1406 aa31.61■■■□□ 2.65
TRAF4-211ENST00000478021 TCP11L2Q8N4U5 519 aa31.59■■■□□ 2.65
TRAF4-211ENST00000478021 COG3Q96JB2 828 aa31.59■■■□□ 2.65
TRAF4-211ENST00000478021 ABCC6O95255 1503 aa31.58■■■□□ 2.65
TRAF4-211ENST00000478021 BARGINQ6ZT62 677 aa31.57■■■□□ 2.64
TRAF4-211ENST00000478021 TOM1L2Q6ZVM7 507 aa31.57■■■□□ 2.64
TRAF4-211ENST00000478021 GGNBP2Q9H3C7 697 aa31.57■■■□□ 2.64
TRAF4-211ENST00000478021 WDR17Q8IZU2 1322 aa31.56■■■□□ 2.64
TRAF4-211ENST00000478021 CARD14Q9BXL6 1004 aa31.56■■■□□ 2.64
TRAF4-211ENST00000478021 NSD3Q9BZ95 1437 aa31.56■■■□□ 2.64
TRAF4-211ENST00000478021 FYB1O15117 783 aa31.55■■■□□ 2.64
TRAF4-211ENST00000478021 CSB-PGBD3P0DP91 1061 aa31.55■■■□□ 2.64
TRAF4-211ENST00000478021 FAM182BQ5T319 152 aa31.55■■■□□ 2.64
TRAF4-211ENST00000478021 FBLN1P23142 703 aa31.53■■■□□ 2.64
TRAF4-211ENST00000478021 THRAP3Q9Y2W1 955 aaKnown RBP31.53■■■□□ 2.64
TRAF4-211ENST00000478021 EP400Q96L91 3159 aa31.52■■■□□ 2.64
TRAF4-211ENST00000478021 WNK3Q9BYP7 1800 aa31.52■■■□□ 2.64
TRAF4-211ENST00000478021 C11orf95C9JLR9 678 aaPredicted RBP31.51■■■□□ 2.63
TRAF4-211ENST00000478021 PARP4Q9UKK3 1724 aaKnown RBP31.5■■■□□ 2.63
TRAF4-211ENST00000478021 BLMP54132 1417 aaPredicted RBP31.48■■■□□ 2.63
TRAF4-211ENST00000478021 MAP3K19Q56UN5 1328 aa31.47■■■□□ 2.63
TRAF4-211ENST00000478021 CCDC125Q86Z20 511 aa31.46■■■□□ 2.63
TRAF4-211ENST00000478021 ERBB3P21860 1342 aa31.46■■■□□ 2.63
TRAF4-211ENST00000478021 LRRC37A3O60309 1634 aa31.46■■■□□ 2.63
TRAF4-211ENST00000478021 ANKRD24Q8TF21 1146 aa31.45■■■□□ 2.63
TRAF4-211ENST00000478021 CARD10Q9BWT7 1032 aa31.45■■■□□ 2.63
TRAF4-211ENST00000478021 PDE3BQ13370 1112 aa31.44■■■□□ 2.62
TRAF4-211ENST00000478021 RRS1Q15050 365 aaKnown RBP31.43■■■□□ 2.62
TRAF4-211ENST00000478021 IP6K1Q92551 441 aa31.42■■■□□ 2.62
TRAF4-211ENST00000478021 AMPHP49418 695 aa31.41■■■□□ 2.62
TRAF4-211ENST00000478021 NLRP2Q9NX02 1062 aa31.41■■■□□ 2.62
TRAF4-211ENST00000478021 SF3B2Q13435 895 aaKnown RBP31.4■■■□□ 2.62
TRAF4-211ENST00000478021 LTV1Q96GA3 475 aaPredicted RBP31.4■■■□□ 2.62
TRAF4-211ENST00000478021 PANK3Q9H999 370 aa31.4■■■□□ 2.62
TRAF4-211ENST00000478021 RGPD1P0DJD0 1748 aa31.39■■■□□ 2.62
TRAF4-211ENST00000478021 HOXC9P31274 260 aa31.39■■■□□ 2.62
TRAF4-211ENST00000478021 CGNL1Q0VF96 1302 aa31.39■■■□□ 2.62
TRAF4-211ENST00000478021 CCDC7Q96M83 1385 aa31.39■■■□□ 2.62
TRAF4-211ENST00000478021 DEFB132Q7Z7B7 95 aa31.38■■■□□ 2.61
TRAF4-211ENST00000478021 KIF7Q2M1P5 1343 aa31.37■■■□□ 2.61
TRAF4-211ENST00000478021 DISP2A7MBM2 1401 aa31.37■■■□□ 2.61
TRAF4-211ENST00000478021 ANKRD26Q9UPS8 1709 aa31.36■■■□□ 2.61
TRAF4-211ENST00000478021 FAM208AQ9UK61 1670 aaKnown RBP31.36■■■□□ 2.61
TRAF4-211ENST00000478021 DDB1Q16531 1140 aa31.36■■■□□ 2.61
TRAF4-211ENST00000478021 PEAK1Q9H792 1746 aa31.35■■■□□ 2.61
TRAF4-211ENST00000478021 TNS1Q9HBL0 1735 aaKnown RBP31.35■■■□□ 2.61
TRAF4-211ENST00000478021 RTL1A6NKG5 1358 aa31.35■■■□□ 2.61
TRAF4-211ENST00000478021 FAM196AQ6ZSG2 479 aa31.35■■■□□ 2.61
TRAF4-211ENST00000478021 RGPD2P0DJD1 1756 aa31.35■■■□□ 2.61
TRAF4-211ENST00000478021 CDCA7Q9BWT1 371 aaPredicted RBP31.33■■■□□ 2.61
TRAF4-211ENST00000478021 TRIM37O94972 964 aa31.31■■■□□ 2.6
TRAF4-211ENST00000478021 MAP2P11137 1827 aaKnown RBP31.29■■■□□ 2.6
TRAF4-211ENST00000478021 EMILIN1Q9Y6C2 1016 aa31.29■■■□□ 2.6
TRAF4-211ENST00000478021 OVOS2A0A0G2JMS6 1433 aa31.28■■■□□ 2.6
TRAF4-211ENST00000478021 BAG6P46379 1132 aa31.27■■■□□ 2.6
TRAF4-211ENST00000478021 EXOC5O00471 708 aa31.26■■■□□ 2.59
TRAF4-211ENST00000478021 IL2RBP14784 551 aa31.26■■■□□ 2.59
TRAF4-211ENST00000478021 MARCH10Q8NA82 808 aaPredicted RBP31.26■■■□□ 2.59
TRAF4-211ENST00000478021 FLT4P35916 1363 aa31.26■■■□□ 2.59
TRAF4-211ENST00000478021 TNS2Q63HR2 1409 aa31.25■■■□□ 2.59
TRAF4-211ENST00000478021 TNNT2P45379 298 aaPredicted RBP31.25■■■□□ 2.59
TRAF4-211ENST00000478021 HSP90AB2PQ58FF8 381 aa31.25■■■□□ 2.59
TRAF4-211ENST00000478021 SBF2Q86WG5 1849 aa31.24■■■□□ 2.59
TRAF4-211ENST00000478021 PPM1GO15355 546 aaPredicted RBP31.24■■■□□ 2.59
TRAF4-211ENST00000478021 INSRP06213 1382 aa31.23■■■□□ 2.59
TRAF4-211ENST00000478021 SMG6Q86US8 1419 aaKnown RBP31.23■■■□□ 2.59
TRAF4-211ENST00000478021 KIF24Q5T7B8 1368 aa31.22■■■□□ 2.59
TRAF4-211ENST00000478021 EN1Q05925 392 aaPredicted RBP31.22■■■□□ 2.59
TRAF4-211ENST00000478021 KNSTRNQ9Y448 316 aa31.21■■■□□ 2.59
TRAF4-211ENST00000478021 NSD2O96028 1365 aa31.19■■■□□ 2.58
TRAF4-211ENST00000478021 APBA3O96018 575 aa31.19■■■□□ 2.58
TRAF4-211ENST00000478021 NBPF6Q5VWK0 638 aa31.19■■■□□ 2.58
TRAF4-211ENST00000478021 USHBP1Q8N6Y0 703 aa31.19■■■□□ 2.58
TRAF4-211ENST00000478021 NBPF4Q96M43 638 aa31.19■■■□□ 2.58
TRAF4-211ENST00000478021 WASHC2AQ641Q2 1341 aa31.19■■■□□ 2.58
TRAF4-211ENST00000478021 POLKQ9UBT6 870 aa31.17■■■□□ 2.58
TRAF4-211ENST00000478021 EZH2Q15910 746 aaKnown RBP31.15■■■□□ 2.58
TRAF4-211ENST00000478021 MEGF6O75095 1541 aa31.14■■■□□ 2.58
TRAF4-211ENST00000478021 MORC1Q86VD1 984 aa31.14■■■□□ 2.58
TRAF4-211ENST00000478021 PTF1AQ7RTS3 328 aa31.12■■■□□ 2.57
TRAF4-211ENST00000478021 BCL9O00512 1426 aa31.11■■■□□ 2.57
TRAF4-211ENST00000478021 AMER1Q5JTC6 1135 aaPredicted RBP31.11■■■□□ 2.57
TRAF4-211ENST00000478021 SHANK3Q9BYB0 1731 aa31.1■■■□□ 2.57
TRAF4-211ENST00000478021 CAMKK2Q96RR4 588 aa31.1■■■□□ 2.57
TRAF4-211ENST00000478021 DDX54Q8TDD1 881 aaKnown RBP31.08■■■□□ 2.57
TRAF4-211ENST00000478021 RREB1Q92766 1687 aa31.07■■■□□ 2.56
TRAF4-211ENST00000478021 PER1O15534 1290 aaPredicted RBP31.07■■■□□ 2.56
TRAF4-211ENST00000478021 ACSBG1Q96GR2 724 aa31.07■■■□□ 2.56
TRAF4-211ENST00000478021 NHSQ6T4R5 1651 aa31.06■■■□□ 2.56
TRAF4-211ENST00000478021 RAPGEF4Q8WZA2 1011 aa31.06■■■□□ 2.56
TRAF4-211ENST00000478021 BCL11BQ9C0K0 894 aaPredicted RBP31.06■■■□□ 2.56
TRAF4-211ENST00000478021 KAT6BQ8WYB5 2073 aa31.04■■■□□ 2.56
TRAF4-211ENST00000478021 ZCRB1Q8TBF4 217 aaKnown RBP31.04■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms