RNA–Protein interactions for RNA: ENST00000477983.1

LMBR1-216, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 605 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-216ENST00000477983 NEUROD2Q15784 382 aa10.33□□□□□ -0.76
LMBR1-216ENST00000477983 EPS8L1Q8TE68 723 aa10.33□□□□□ -0.76
LMBR1-216ENST00000477983 SLC16A10Q8TF71 515 aa10.33□□□□□ -0.76
LMBR1-216ENST00000477983 PCMTD1Q96MG8 357 aaPredicted RBP10.33□□□□□ -0.76
LMBR1-216ENST00000477983 TMEM259Q4ZIN3 620 aa10.32□□□□□ -0.76
LMBR1-216ENST00000477983 ZBTB33Q86T24 672 aa10.32□□□□□ -0.76
LMBR1-216ENST00000477983 MEIOBQ8N635 442 aa10.32□□□□□ -0.76
LMBR1-216ENST00000477983 HMX1Q9NP08 348 aaPredicted RBP10.32□□□□□ -0.76
LMBR1-216ENST00000477983 LINC00528Q8N1L1 170 aa10.3□□□□□ -0.76
LMBR1-216ENST00000477983 PNMA1Q8ND90 353 aa10.3□□□□□ -0.76
LMBR1-216ENST00000477983 IL27Q8NEV9 243 aa10.3□□□□□ -0.76
LMBR1-216ENST00000477983 KCTD15Q96SI1 283 aaPredicted RBP10.3□□□□□ -0.76
LMBR1-216ENST00000477983 H3BM21 787 aa10.29□□□□□ -0.76
LMBR1-216ENST00000477983 SLC10A4Q96EP9 437 aa10.29□□□□□ -0.76
LMBR1-216ENST00000477983 UPP2O95045 317 aa10.28□□□□□ -0.76
LMBR1-216ENST00000477983 BRPF1P55201 1214 aaPredicted RBP10.28□□□□□ -0.76
LMBR1-216ENST00000477983 PPP1R26Q5T8A7 1209 aaPredicted RBP10.28□□□□□ -0.76
LMBR1-216ENST00000477983 ADAM32Q8TC27 787 aa10.28□□□□□ -0.76
LMBR1-216ENST00000477983 TSEN34Q9BSV6 310 aaKnown RBP10.28□□□□□ -0.76
LMBR1-216ENST00000477983 INSM1Q01101 510 aaPredicted RBP10.27□□□□□ -0.77
LMBR1-216ENST00000477983 C6orf118Q5T5N4 469 aa10.27□□□□□ -0.77
LMBR1-216ENST00000477983 Q6ZVU0 165 aa10.27□□□□□ -0.77
LMBR1-216ENST00000477983 TRIM34Q9BYJ4 488 aa10.27□□□□□ -0.77
LMBR1-216ENST00000477983 PGPEP1Q9NXJ5 209 aa10.27□□□□□ -0.77
LMBR1-216ENST00000477983 SOBPA7XYQ1 873 aa10.26□□□□□ -0.77
LMBR1-216ENST00000477983 BMP2P12643 396 aa10.26□□□□□ -0.77
LMBR1-216ENST00000477983 DHX9Q08211 1270 aaKnown RBP10.26□□□□□ -0.77
LMBR1-216ENST00000477983 IRF7Q92985 503 aa10.26□□□□□ -0.77
LMBR1-216ENST00000477983 SOS2Q07890 1332 aaPredicted RBP10.26□□□□□ -0.77
LMBR1-216ENST00000477983 INTS6LQ5JSJ4 861 aaKnown RBP10.25□□□□□ -0.77
LMBR1-216ENST00000477983 MAN1A2O60476 641 aa10.23□□□□□ -0.77
LMBR1-216ENST00000477983 VEGFBP49765 207 aa10.23□□□□□ -0.77
LMBR1-216ENST00000477983 CBLBQ13191 982 aa10.22□□□□□ -0.77
LMBR1-216ENST00000477983 NBPF20Q3BBV1 942 aa10.22□□□□□ -0.77
LMBR1-216ENST00000477983 GJD4Q96KN9 370 aaPredicted RBP10.22□□□□□ -0.77
LMBR1-216ENST00000477983 STK17AQ9UEE5 414 aa10.22□□□□□ -0.77
LMBR1-216ENST00000477983 GMPRP36959 345 aa10.21□□□□□ -0.77
LMBR1-216ENST00000477983 ERBB4Q15303 1308 aa10.21□□□□□ -0.78
LMBR1-216ENST00000477983 ESPNB1AK53 854 aa10.2□□□□□ -0.78
LMBR1-216ENST00000477983 SPINT1O43278 529 aa10.2□□□□□ -0.78
LMBR1-216ENST00000477983 VSIG8P0DPA2 414 aa10.2□□□□□ -0.78
LMBR1-216ENST00000477983 DZIP3Q86Y13 1208 aaKnown RBP10.2□□□□□ -0.78
LMBR1-216ENST00000477983 DNMT3LQ9UJW3 386 aa10.2□□□□□ -0.78
LMBR1-216ENST00000477983 SOCS7O14512 581 aa10.19□□□□□ -0.78
LMBR1-216ENST00000477983 BANK1Q8NDB2 785 aa10.19□□□□□ -0.78
LMBR1-216ENST00000477983 TTLL8A6PVC2 850 aa10.17□□□□□ -0.78
LMBR1-216ENST00000477983 ZBBXA8MT70 800 aa10.17□□□□□ -0.78
LMBR1-216ENST00000477983 PPFIA3O75145 1194 aa10.17□□□□□ -0.78
LMBR1-216ENST00000477983 LORP23490 312 aaPredicted RBP10.17□□□□□ -0.78
LMBR1-216ENST00000477983 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.17□□□□□ -0.78
LMBR1-216ENST00000477983 TPRNQ4KMQ1 711 aa10.17□□□□□ -0.78
LMBR1-216ENST00000477983 SEPT12Q8IYM1 358 aa10.17□□□□□ -0.78
LMBR1-216ENST00000477983 TMPRSS4Q9NRS4 437 aa10.16□□□□□ -0.78
LMBR1-216ENST00000477983 ERVH48-1M5A8F1 160 aa10.15□□□□□ -0.78
LMBR1-216ENST00000477983 LILRA1O75019 489 aa10.15□□□□□ -0.78
LMBR1-216ENST00000477983 ZNF784Q8NCA9 323 aaPredicted RBP10.14□□□□□ -0.79
LMBR1-216ENST00000477983 FBXO45P0C2W1 286 aa10.13□□□□□ -0.79
LMBR1-216ENST00000477983 ADD1P35611 737 aaKnown RBP10.13□□□□□ -0.79
LMBR1-216ENST00000477983 AGBL1Q96MI9 1066 aa10.13□□□□□ -0.79
LMBR1-216ENST00000477983 CCDC125Q86Z20 511 aa10.12□□□□□ -0.79
LMBR1-216ENST00000477983 FIGNL2A6NMB9 653 aa10.11□□□□□ -0.79
LMBR1-216ENST00000477983 ADH1AP07327 375 aa10.11□□□□□ -0.79
LMBR1-216ENST00000477983 MCCD1P59942 119 aaPredicted RBP10.11□□□□□ -0.79
LMBR1-216ENST00000477983 RELBQ01201 579 aa10.11□□□□□ -0.79
LMBR1-216ENST00000477983 PTSQ03393 145 aa10.11□□□□□ -0.79
LMBR1-216ENST00000477983 KDF1Q8NAX2 398 aaPredicted RBP10.11□□□□□ -0.79
LMBR1-216ENST00000477983 ZSCAN1Q8NBB4 408 aa10.11□□□□□ -0.79
LMBR1-216ENST00000477983 TRIM52Q96A61 297 aa10.11□□□□□ -0.79
LMBR1-216ENST00000477983 CTSOP43234 321 aaPredicted RBP10.1□□□□□ -0.79
LMBR1-216ENST00000477983 RAB15P59190 212 aa10.1□□□□□ -0.79
LMBR1-216ENST00000477983 MTMR14Q8NCE2 650 aa10.1□□□□□ -0.79
LMBR1-216ENST00000477983 GPR37L1O60883 481 aa10.09□□□□□ -0.79
LMBR1-216ENST00000477983 GIGYF1O75420 1035 aaPredicted RBP10.09□□□□□ -0.79
LMBR1-216ENST00000477983 PTGIRP43119 386 aa10.09□□□□□ -0.79
LMBR1-216ENST00000477983 NR1H3Q13133 447 aa10.09□□□□□ -0.79
LMBR1-216ENST00000477983 INSM2Q96T92 566 aaPredicted RBP10.09□□□□□ -0.79
LMBR1-216ENST00000477983 SLC35F4A4IF30 521 aa10.08□□□□□ -0.8
LMBR1-216ENST00000477983 NANOS1Q8WY41 292 aaKnown RBP10.08□□□□□ -0.8
LMBR1-216ENST00000477983 ZNF395Q9H8N7 513 aaPredicted RBP10.08□□□□□ -0.8
LMBR1-216ENST00000477983 PCDHB9Q9Y5E1 797 aa10.08□□□□□ -0.8
LMBR1-216ENST00000477983 FAM181BA6NEQ2 426 aa10.07□□□□□ -0.8
LMBR1-216ENST00000477983 SNRKQ9NRH2 765 aa10.07□□□□□ -0.8
LMBR1-216ENST00000477983 CCDC155Q8N6L0 562 aa10.06□□□□□ -0.8
LMBR1-216ENST00000477983 RNF217Q8TC41 542 aa10.06□□□□□ -0.8
LMBR1-216ENST00000477983 ZNF592Q92610 1267 aa10.06□□□□□ -0.8
LMBR1-216ENST00000477983 NDUFB9Q9Y6M9 179 aa10.06□□□□□ -0.8
LMBR1-216ENST00000477983 APBB1O00213 710 aa10.05□□□□□ -0.8
LMBR1-216ENST00000477983 RNF20Q5VTR2 975 aa10.05□□□□□ -0.8
LMBR1-216ENST00000477983 POLMQ9NP87 494 aaPredicted RBP10.05□□□□□ -0.8
LMBR1-216ENST00000477983 FOXD4L5Q5VV16 416 aaPredicted RBP10.04□□□□□ -0.8
LMBR1-216ENST00000477983 GPR161Q8N6U8 529 aaKnown RBP10.04□□□□□ -0.8
LMBR1-216ENST00000477983 CYLDQ9NQC7 956 aa10.04□□□□□ -0.8
LMBR1-216ENST00000477983 ZNF330Q9Y3S2 320 aaPredicted RBP10.04□□□□□ -0.8
LMBR1-216ENST00000477983 ERVK-9P63128 1117 aa10.03□□□□□ -0.8
LMBR1-216ENST00000477983 RNF144AP50876 292 aaPredicted RBP10.02□□□□□ -0.81
LMBR1-216ENST00000477983 CC2D2BQ6DHV5 1058 aa10.01□□□□□ -0.81
LMBR1-216ENST00000477983 SENP3-EIF4A1A0A087X0R7 540 aa10□□□□□ -0.81
LMBR1-216ENST00000477983 ATP5J2-PTCD1G3V325 749 aa10□□□□□ -0.81
LMBR1-216ENST00000477983 ITGA6P23229 1130 aa10□□□□□ -0.81
LMBR1-216ENST00000477983 KRT76Q01546 638 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms