RNA–Protein interactions for RNA: ENST00000477928.1

SOX2-OT-208, SOX2 overlapping transcript, humanhuman

TSL 2 BASIC

Gene SOX2-OT, Length 902 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-208ENST00000477928 BARGINQ6ZT62 677 aa19.35■□□□□ 0.69
SOX2-OT-208ENST00000477928 TERF2IPQ9NYB0 399 aa19.35■□□□□ 0.69
SOX2-OT-208ENST00000477928 CRB1P82279 1406 aa19.34■□□□□ 0.69
SOX2-OT-208ENST00000477928 FBLN1P23142 703 aa19.34■□□□□ 0.69
SOX2-OT-208ENST00000477928 CCDC125Q86Z20 511 aa19.34■□□□□ 0.69
SOX2-OT-208ENST00000477928 KCNH5Q8NCM2 988 aa19.34■□□□□ 0.69
SOX2-OT-208ENST00000477928 OVOS2A0A0J9YW53 1432 aa19.34■□□□□ 0.69
SOX2-OT-208ENST00000477928 OVOS2Q6IE36 1432 aa19.34■□□□□ 0.69
SOX2-OT-208ENST00000477928 TOM1L2Q6ZVM7 507 aa19.33■□□□□ 0.68
SOX2-OT-208ENST00000477928 SRCAPQ6ZRS2 3230 aa19.31■□□□□ 0.68
SOX2-OT-208ENST00000477928 WDR17Q8IZU2 1322 aa19.31■□□□□ 0.68
SOX2-OT-208ENST00000477928 ANKRD36BQ8N2N9 1353 aa19.3■□□□□ 0.68
SOX2-OT-208ENST00000477928 MSH5O43196 834 aa19.29■□□□□ 0.68
SOX2-OT-208ENST00000477928 TRIM37O94972 964 aa19.29■□□□□ 0.68
SOX2-OT-208ENST00000477928 CSB-PGBD3P0DP91 1061 aa19.29■□□□□ 0.68
SOX2-OT-208ENST00000477928 SF3B2Q13435 895 aaKnown RBP19.29■□□□□ 0.68
SOX2-OT-208ENST00000477928 USP54Q70EL1 1684 aa19.29■□□□□ 0.68
SOX2-OT-208ENST00000477928 EN1Q05925 392 aaPredicted RBP19.28■□□□□ 0.68
SOX2-OT-208ENST00000477928 PDE3BQ13370 1112 aa19.27■□□□□ 0.68
SOX2-OT-208ENST00000477928 THRAP3Q9Y2W1 955 aaKnown RBP19.27■□□□□ 0.68
SOX2-OT-208ENST00000477928 CARD14Q9BXL6 1004 aa19.26■□□□□ 0.67
SOX2-OT-208ENST00000477928 GGNBP2Q9H3C7 697 aa19.26■□□□□ 0.67
SOX2-OT-208ENST00000477928 LRRC37A3O60309 1634 aa19.25■□□□□ 0.67
SOX2-OT-208ENST00000477928 RGPD5Q99666 1765 aa19.25■□□□□ 0.67
SOX2-OT-208ENST00000477928 FAM196AQ6ZSG2 479 aa19.25■□□□□ 0.67
SOX2-OT-208ENST00000477928 PTF1AQ7RTS3 328 aa19.25■□□□□ 0.67
SOX2-OT-208ENST00000477928 DISP2A7MBM2 1401 aa19.25■□□□□ 0.67
SOX2-OT-208ENST00000477928 ERBB3P21860 1342 aa19.25■□□□□ 0.67
SOX2-OT-208ENST00000477928 HSPA5P11021 654 aaKnown RBP19.24■□□□□ 0.67
SOX2-OT-208ENST00000477928 EIF4G2P78344 907 aaKnown RBP eCLIP19.24■□□□□ 0.67
SOX2-OT-208ENST00000477928 CARD10Q9BWT7 1032 aa19.24■□□□□ 0.67
SOX2-OT-208ENST00000477928 TNS1Q9HBL0 1735 aaKnown RBP19.24■□□□□ 0.67
SOX2-OT-208ENST00000477928 MAP3K19Q56UN5 1328 aa19.24■□□□□ 0.67
SOX2-OT-208ENST00000477928 FYB1O15117 783 aa19.23■□□□□ 0.67
SOX2-OT-208ENST00000477928 BAG6P46379 1132 aa19.23■□□□□ 0.67
SOX2-OT-208ENST00000477928 ANKRD24Q8TF21 1146 aa19.23■□□□□ 0.67
SOX2-OT-208ENST00000477928 ABCC6O95255 1503 aa19.23■□□□□ 0.67
SOX2-OT-208ENST00000477928 MYOM1P52179 1685 aa19.23■□□□□ 0.67
SOX2-OT-208ENST00000477928 PARP4Q9UKK3 1724 aaKnown RBP19.22■□□□□ 0.67
SOX2-OT-208ENST00000477928 EZH2Q15910 746 aaKnown RBP19.22■□□□□ 0.67
SOX2-OT-208ENST00000477928 MARCH10Q8NA82 808 aaPredicted RBP19.22■□□□□ 0.67
SOX2-OT-208ENST00000477928 LTV1Q96GA3 475 aaPredicted RBP19.22■□□□□ 0.67
SOX2-OT-208ENST00000477928 COG3Q96JB2 828 aa19.22■□□□□ 0.67
SOX2-OT-208ENST00000477928 POLR3GLQ9BT43 218 aa19.22■□□□□ 0.67
SOX2-OT-208ENST00000477928 NLRP2Q9NX02 1062 aa19.22■□□□□ 0.67
SOX2-OT-208ENST00000477928 PSDA5PKW4 1024 aaPredicted RBP19.21■□□□□ 0.67
SOX2-OT-208ENST00000477928 RRS1Q15050 365 aaKnown RBP19.21■□□□□ 0.67
SOX2-OT-208ENST00000477928 DDB1Q16531 1140 aa19.21■□□□□ 0.67
SOX2-OT-208ENST00000477928 NSD3Q9BZ95 1437 aa19.2■□□□□ 0.66
SOX2-OT-208ENST00000477928 APBA3O96018 575 aa19.2■□□□□ 0.66
SOX2-OT-208ENST00000477928 LTN1O94822 1766 aa19.19■□□□□ 0.66
SOX2-OT-208ENST00000477928 CAMKK2Q96RR4 588 aa19.19■□□□□ 0.66
SOX2-OT-208ENST00000477928 RGPD1P0DJD0 1748 aa19.19■□□□□ 0.66
SOX2-OT-208ENST00000477928 PEAK1Q9H792 1746 aa19.19■□□□□ 0.66
SOX2-OT-208ENST00000477928 OVOS2A0A0G2JMS6 1433 aa19.18■□□□□ 0.66
SOX2-OT-208ENST00000477928 IP6K1Q92551 441 aa19.18■□□□□ 0.66
SOX2-OT-208ENST00000477928 WNK3Q9BYP7 1800 aa19.17■□□□□ 0.66
SOX2-OT-208ENST00000477928 C11orf95C9JLR9 678 aaPredicted RBP19.17■□□□□ 0.66
SOX2-OT-208ENST00000477928 HOXC9P31274 260 aa19.17■□□□□ 0.66
SOX2-OT-208ENST00000477928 CCDC7Q96M83 1385 aa19.17■□□□□ 0.66
SOX2-OT-208ENST00000477928 AMPHP49418 695 aa19.14■□□□□ 0.65
SOX2-OT-208ENST00000477928 TNS2Q63HR2 1409 aa19.14■□□□□ 0.65
SOX2-OT-208ENST00000477928 R3HDM1Q15032 1099 aaKnown RBP19.13■□□□□ 0.65
SOX2-OT-208ENST00000477928 CDCA7Q9BWT1 371 aaPredicted RBP19.13■□□□□ 0.65
SOX2-OT-208ENST00000477928 EXOC5O00471 708 aa19.12■□□□□ 0.65
SOX2-OT-208ENST00000477928 USHBP1Q8N6Y0 703 aa19.12■□□□□ 0.65
SOX2-OT-208ENST00000477928 KCNQ2O43526 872 aa19.11■□□□□ 0.65
SOX2-OT-208ENST00000477928 IL2RBP14784 551 aa19.11■□□□□ 0.65
SOX2-OT-208ENST00000477928 EMILIN1Q9Y6C2 1016 aa19.11■□□□□ 0.65
SOX2-OT-208ENST00000477928 HSP90AB2PQ58FF8 381 aa19.1■□□□□ 0.65
SOX2-OT-208ENST00000477928 ACSBG1Q96GR2 724 aa19.1■□□□□ 0.65
SOX2-OT-208ENST00000477928 NBPF6Q5VWK0 638 aa19.09■□□□□ 0.65
SOX2-OT-208ENST00000477928 NBPF4Q96M43 638 aa19.09■□□□□ 0.65
SOX2-OT-208ENST00000477928 RTL1A6NKG5 1358 aa19.08■□□□□ 0.65
SOX2-OT-208ENST00000477928 MEGF6O75095 1541 aa19.08■□□□□ 0.64
SOX2-OT-208ENST00000477928 KIF20BQ96Q89 1820 aa19.07■□□□□ 0.64
SOX2-OT-208ENST00000477928 BCL11BQ9C0K0 894 aaPredicted RBP19.07■□□□□ 0.64
SOX2-OT-208ENST00000477928 FAM208AQ9UK61 1670 aaKnown RBP19.07■□□□□ 0.64
SOX2-OT-208ENST00000477928 BCL9O00512 1426 aa19.07■□□□□ 0.64
SOX2-OT-208ENST00000477928 PANK3Q9H999 370 aa19.06■□□□□ 0.64
SOX2-OT-208ENST00000477928 RREB1Q92766 1687 aa19.05■□□□□ 0.64
SOX2-OT-208ENST00000477928 TNNT2P45379 298 aaPredicted RBP19.05■□□□□ 0.64
SOX2-OT-208ENST00000477928 PROM2Q8N271 834 aa19.05■□□□□ 0.64
SOX2-OT-208ENST00000477928 ANO8Q9HCE9 1232 aaPredicted RBP19.05■□□□□ 0.64
SOX2-OT-208ENST00000477928 KIF24Q5T7B8 1368 aa19.05■□□□□ 0.64
SOX2-OT-208ENST00000477928 PARD3Q8TEW0 1356 aa19.05■□□□□ 0.64
SOX2-OT-208ENST00000477928 PPM1GO15355 546 aaPredicted RBP19.04■□□□□ 0.64
SOX2-OT-208ENST00000477928 NUP188Q5SRE5 1749 aa19.04■□□□□ 0.64
SOX2-OT-208ENST00000477928 DDX54Q8TDD1 881 aaKnown RBP19.04■□□□□ 0.64
SOX2-OT-208ENST00000477928 CGNL1Q0VF96 1302 aa19.03■□□□□ 0.64
SOX2-OT-208ENST00000477928 INSRP06213 1382 aa19.03■□□□□ 0.64
SOX2-OT-208ENST00000477928 FLT4P35916 1363 aa19.03■□□□□ 0.64
SOX2-OT-208ENST00000477928 RGPD2P0DJD1 1756 aa19.02■□□□□ 0.64
SOX2-OT-208ENST00000477928 SBF2Q86WG5 1849 aa19.02■□□□□ 0.63
SOX2-OT-208ENST00000477928 KIF7Q2M1P5 1343 aa19.01■□□□□ 0.63
SOX2-OT-208ENST00000477928 POLKQ9UBT6 870 aa19■□□□□ 0.63
SOX2-OT-208ENST00000477928 NSD2O96028 1365 aa18.99■□□□□ 0.63
SOX2-OT-208ENST00000477928 PLSCR1O15162 318 aa18.99■□□□□ 0.63
SOX2-OT-208ENST00000477928 PDGFDQ9GZP0 370 aaPredicted RBP18.98■□□□□ 0.63
SOX2-OT-208ENST00000477928 SMG6Q86US8 1419 aaKnown RBP18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms