RNA–Protein interactions for RNA: ENST00000477890.6

CPSF7-211, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,234 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-211ENST00000477890 SOX12O15370 315 aa16.8■□□□□ 0.28
CPSF7-211ENST00000477890 DDB1Q16531 1140 aa16.8■□□□□ 0.28
CPSF7-211ENST00000477890 NBPF14Q5TI25 921 aa16.8■□□□□ 0.28
CPSF7-211ENST00000477890 AXIN2Q9Y2T1 843 aa16.8■□□□□ 0.28
CPSF7-211ENST00000477890 SBF2Q86WG5 1849 aa16.8■□□□□ 0.28
CPSF7-211ENST00000477890 WDR17Q8IZU2 1322 aa16.79■□□□□ 0.28
CPSF7-211ENST00000477890 KCNH5Q8NCM2 988 aa16.79■□□□□ 0.28
CPSF7-211ENST00000477890 TTC21AQ8NDW8 1320 aa16.78■□□□□ 0.28
CPSF7-211ENST00000477890 ARHGEF25Q86VW2 580 aa16.78■□□□□ 0.28
CPSF7-211ENST00000477890 KTN1Q86UP2 1357 aaKnown RBP16.77■□□□□ 0.28
CPSF7-211ENST00000477890 CSB-PGBD3P0DP91 1061 aa16.76■□□□□ 0.27
CPSF7-211ENST00000477890 MON2Q7Z3U7 1717 aa16.76■□□□□ 0.27
CPSF7-211ENST00000477890 CDCA7Q9BWT1 371 aaPredicted RBP16.75■□□□□ 0.27
CPSF7-211ENST00000477890 NFAT5O94916 1531 aa16.75■□□□□ 0.27
CPSF7-211ENST00000477890 RGPD3A6NKT7 1758 aaPredicted RBP16.74■□□□□ 0.27
CPSF7-211ENST00000477890 RGPD4Q7Z3J3 1758 aa16.74■□□□□ 0.27
CPSF7-211ENST00000477890 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.73■□□□□ 0.27
CPSF7-211ENST00000477890 MARCH10Q8NA82 808 aaPredicted RBP16.73■□□□□ 0.27
CPSF7-211ENST00000477890 CARD10Q9BWT7 1032 aa16.73■□□□□ 0.27
CPSF7-211ENST00000477890 CARD11Q9BXL7 1154 aa16.73■□□□□ 0.27
CPSF7-211ENST00000477890 BCL11BQ9C0K0 894 aaPredicted RBP16.73■□□□□ 0.27
CPSF7-211ENST00000477890 SBNO2Q9Y2G9 1366 aa16.73■□□□□ 0.27
CPSF7-211ENST00000477890 PLSCR1O15162 318 aa16.72■□□□□ 0.27
CPSF7-211ENST00000477890 PTF1AQ7RTS3 328 aa16.72■□□□□ 0.27
CPSF7-211ENST00000477890 ABCC6O95255 1503 aa16.7■□□□□ 0.26
CPSF7-211ENST00000477890 CCDC7Q96M83 1385 aa16.7■□□□□ 0.26
CPSF7-211ENST00000477890 TMC1Q8TDI8 760 aa16.7■□□□□ 0.26
CPSF7-211ENST00000477890 SPON1Q9HCB6 807 aa16.7■□□□□ 0.26
CPSF7-211ENST00000477890 BCL9O00512 1426 aa16.7■□□□□ 0.26
CPSF7-211ENST00000477890 USP54Q70EL1 1684 aa16.69■□□□□ 0.26
CPSF7-211ENST00000477890 CD163L1Q9NR16 1453 aa16.69■□□□□ 0.26
CPSF7-211ENST00000477890 USP31Q70CQ4 1352 aa16.69■□□□□ 0.26
CPSF7-211ENST00000477890 EXOC5O00471 708 aa16.69■□□□□ 0.26
CPSF7-211ENST00000477890 KCNQ2O43526 872 aa16.69■□□□□ 0.26
CPSF7-211ENST00000477890 NME9Q86XW9 330 aa16.69■□□□□ 0.26
CPSF7-211ENST00000477890 PPP1R1BQ9UD71 204 aaPredicted RBP16.69■□□□□ 0.26
CPSF7-211ENST00000477890 LTN1O94822 1766 aa16.69■□□□□ 0.26
CPSF7-211ENST00000477890 HDGFL2Q7Z4V5 671 aaPredicted RBP16.68■□□□□ 0.26
CPSF7-211ENST00000477890 ANO8Q9HCE9 1232 aaPredicted RBP16.68■□□□□ 0.26
CPSF7-211ENST00000477890 TONSLQ96HA7 1378 aa16.67■□□□□ 0.26
CPSF7-211ENST00000477890 SLC12A5Q9H2X9 1139 aa16.67■□□□□ 0.26
CPSF7-211ENST00000477890 TNS2Q63HR2 1409 aa16.66■□□□□ 0.26
CPSF7-211ENST00000477890 PROM2Q8N271 834 aa16.66■□□□□ 0.26
CPSF7-211ENST00000477890 ERBB3P21860 1342 aa16.66■□□□□ 0.26
CPSF7-211ENST00000477890 CASZ1Q86V15 1759 aa16.65■□□□□ 0.26
CPSF7-211ENST00000477890 NLRP2Q9NX02 1062 aa16.65■□□□□ 0.26
CPSF7-211ENST00000477890 EDC4Q6P2E9 1401 aaKnown RBP16.64■□□□□ 0.25
CPSF7-211ENST00000477890 TERF2IPQ9NYB0 399 aa16.64■□□□□ 0.25
CPSF7-211ENST00000477890 A0A1W2PP64 1363 aa16.64■□□□□ 0.25
CPSF7-211ENST00000477890 TXNRD1Q16881 649 aa16.63■□□□□ 0.25
CPSF7-211ENST00000477890 NHSQ6T4R5 1651 aa16.62■□□□□ 0.25
CPSF7-211ENST00000477890 IL2RBP14784 551 aa16.62■□□□□ 0.25
CPSF7-211ENST00000477890 ANKRD24Q8TF21 1146 aa16.62■□□□□ 0.25
CPSF7-211ENST00000477890 ACSBG1Q96GR2 724 aa16.62■□□□□ 0.25
CPSF7-211ENST00000477890 PDGFDQ9GZP0 370 aaPredicted RBP16.62■□□□□ 0.25
CPSF7-211ENST00000477890 STK32BQ9NY57 414 aa16.61■□□□□ 0.25
CPSF7-211ENST00000477890 KAT6BQ8WYB5 2073 aa16.61■□□□□ 0.25
CPSF7-211ENST00000477890 NINLQ9Y2I6 1382 aa16.61■□□□□ 0.25
CPSF7-211ENST00000477890 ZBTB7AO95365 584 aa16.6■□□□□ 0.25
CPSF7-211ENST00000477890 PUS7Q96PZ0 661 aaKnown RBP16.6■□□□□ 0.25
CPSF7-211ENST00000477890 DCAF8L1A6NGE4 600 aa16.59■□□□□ 0.25
CPSF7-211ENST00000477890 YY1P25490 414 aa16.58■□□□□ 0.24
CPSF7-211ENST00000477890 SLC15A2Q16348 729 aa16.58■□□□□ 0.24
CPSF7-211ENST00000477890 BTAF1O14981 1849 aa16.57■□□□□ 0.24
CPSF7-211ENST00000477890 ST20-MTHFSA0A0A6YYL1 179 aa16.57■□□□□ 0.24
CPSF7-211ENST00000477890 TESK2Q96S53 571 aa16.57■□□□□ 0.24
CPSF7-211ENST00000477890 ATF5Q9Y2D1 282 aaPredicted RBP16.57■□□□□ 0.24
CPSF7-211ENST00000477890 MYOM1P52179 1685 aa16.56■□□□□ 0.24
CPSF7-211ENST00000477890 IP6K1Q92551 441 aa16.56■□□□□ 0.24
CPSF7-211ENST00000477890 LTV1Q96GA3 475 aaPredicted RBP16.56■□□□□ 0.24
CPSF7-211ENST00000477890 FAM208AQ9UK61 1670 aaKnown RBP16.56■□□□□ 0.24
CPSF7-211ENST00000477890 PTGER2P43116 358 aa16.55■□□□□ 0.24
CPSF7-211ENST00000477890 COG3Q96JB2 828 aa16.55■□□□□ 0.24
CPSF7-211ENST00000477890 PAPPAQ13219 1627 aa16.53■□□□□ 0.24
CPSF7-211ENST00000477890 DDX54Q8TDD1 881 aaKnown RBP16.53■□□□□ 0.24
CPSF7-211ENST00000477890 MAP3K19Q56UN5 1328 aa16.52■□□□□ 0.24
CPSF7-211ENST00000477890 SLC24A1O60721 1099 aa16.52■□□□□ 0.24
CPSF7-211ENST00000477890 FBLN1P23142 703 aa16.52■□□□□ 0.24
CPSF7-211ENST00000477890 AMPHP49418 695 aa16.52■□□□□ 0.24
CPSF7-211ENST00000477890 MTFR1LQ9H019 292 aa16.52■□□□□ 0.24
CPSF7-211ENST00000477890 RGPD2P0DJD1 1756 aa16.51■□□□□ 0.23
CPSF7-211ENST00000477890 HOXC9P31274 260 aa16.51■□□□□ 0.23
CPSF7-211ENST00000477890 ANKRD36BQ8N2N9 1353 aa16.5■□□□□ 0.23
CPSF7-211ENST00000477890 ZNF827Q17R98 1081 aa16.49■□□□□ 0.23
CPSF7-211ENST00000477890 FHDC1Q9C0D6 1143 aaPredicted RBP16.49■□□□□ 0.23
CPSF7-211ENST00000477890 LRRC4BQ9NT99 713 aa16.49■□□□□ 0.23
CPSF7-211ENST00000477890 SYTL4Q96C24 671 aaPredicted RBP16.48■□□□□ 0.23
CPSF7-211ENST00000477890 SYT17Q9BSW7 474 aa16.48■□□□□ 0.23
CPSF7-211ENST00000477890 DOT1LQ8TEK3 1739 aa16.48■□□□□ 0.23
CPSF7-211ENST00000477890 TMF1P82094 1093 aa16.47■□□□□ 0.23
CPSF7-211ENST00000477890 SGIP1Q9BQI5 828 aa16.47■□□□□ 0.23
CPSF7-211ENST00000477890 SHANK3Q9BYB0 1731 aa16.47■□□□□ 0.23
CPSF7-211ENST00000477890 RRS1Q15050 365 aaKnown RBP16.46■□□□□ 0.23
CPSF7-211ENST00000477890 GGNBP2Q9H3C7 697 aa16.46■□□□□ 0.23
CPSF7-211ENST00000477890 RTL1A6NKG5 1358 aa16.46■□□□□ 0.23
CPSF7-211ENST00000477890 USP47Q96K76 1375 aa16.46■□□□□ 0.23
CPSF7-211ENST00000477890 MEGF6O75095 1541 aa16.45■□□□□ 0.22
CPSF7-211ENST00000477890 FYB1O15117 783 aa16.45■□□□□ 0.22
CPSF7-211ENST00000477890 PRIM1P49642 420 aaKnown RBP16.45■□□□□ 0.22
CPSF7-211ENST00000477890 SLC27A3Q5K4L6 730 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms