RNA–Protein interactions for RNA: ENST00000477819.1

PTPRN-214, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 4

Gene PTPRN, Length 579 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-214ENST00000477819 FAM196AQ6ZSG2 479 aa11.53□□□□□ -0.56
PTPRN-214ENST00000477819 ADGRB2O60241 1585 aa11.53□□□□□ -0.56
PTPRN-214ENST00000477819 RREB1Q92766 1687 aa11.52□□□□□ -0.56
PTPRN-214ENST00000477819 TMEM132EQ6IEE7 984 aa11.52□□□□□ -0.57
PTPRN-214ENST00000477819 SBNO1A3KN83 1393 aa11.52□□□□□ -0.57
PTPRN-214ENST00000477819 ARHGEF10O15013 1369 aa11.51□□□□□ -0.57
PTPRN-214ENST00000477819 PARD3Q8TEW0 1356 aa11.51□□□□□ -0.57
PTPRN-214ENST00000477819 PPLO60437 1756 aa11.5□□□□□ -0.57
PTPRN-214ENST00000477819 IER5LQ5T953 404 aa11.5□□□□□ -0.57
PTPRN-214ENST00000477819 PMFBP1Q8TBY8 1022 aa11.5□□□□□ -0.57
PTPRN-214ENST00000477819 CIZ1Q9ULV3 898 aaPredicted RBP11.5□□□□□ -0.57
PTPRN-214ENST00000477819 RPGRIP1LQ68CZ1 1315 aa11.5□□□□□ -0.57
PTPRN-214ENST00000477819 ADGRF5Q8IZF2 1346 aa11.5□□□□□ -0.57
PTPRN-214ENST00000477819 COL14A1Q05707 1796 aaKnown RBP11.49□□□□□ -0.57
PTPRN-214ENST00000477819 PDGFDQ9GZP0 370 aaPredicted RBP11.49□□□□□ -0.57
PTPRN-214ENST00000477819 TECPR2O15040 1411 aa11.49□□□□□ -0.57
PTPRN-214ENST00000477819 MAMSTRQ6ZN01 415 aa11.48□□□□□ -0.57
PTPRN-214ENST00000477819 SPATA31A1Q5TZJ5 1347 aa11.48□□□□□ -0.57
PTPRN-214ENST00000477819 NRXN1Q9ULB1 1477 aa11.48□□□□□ -0.57
PTPRN-214ENST00000477819 IFT172Q9UG01 1749 aa11.47□□□□□ -0.57
PTPRN-214ENST00000477819 ABCC11Q96J66 1382 aa11.47□□□□□ -0.57
PTPRN-214ENST00000477819 SCUBE2Q9NQ36 999 aa11.47□□□□□ -0.57
PTPRN-214ENST00000477819 USP35Q9P2H5 1018 aa11.47□□□□□ -0.57
PTPRN-214ENST00000477819 NRKQ7Z2Y5 1582 aa11.46□□□□□ -0.57
PTPRN-214ENST00000477819 ZBTB7AO95365 584 aa11.46□□□□□ -0.57
PTPRN-214ENST00000477819 CHRNA2Q15822 529 aa11.46□□□□□ -0.57
PTPRN-214ENST00000477819 ZNF467Q7Z7K2 595 aaPredicted RBP11.46□□□□□ -0.57
PTPRN-214ENST00000477819 PRDM11Q9NQV5 511 aa11.46□□□□□ -0.57
PTPRN-214ENST00000477819 STRN4Q9NRL3 753 aa11.46□□□□□ -0.57
PTPRN-214ENST00000477819 CHD4Q14839 1912 aa11.46□□□□□ -0.58
PTPRN-214ENST00000477819 PDE3BQ13370 1112 aa11.45□□□□□ -0.58
PTPRN-214ENST00000477819 SAFB2Q14151 953 aaKnown RBP eCLIP11.45□□□□□ -0.58
PTPRN-214ENST00000477819 ANO8Q9HCE9 1232 aaPredicted RBP11.45□□□□□ -0.58
PTPRN-214ENST00000477819 RRBP1Q9P2E9 1410 aaKnown RBP11.44□□□□□ -0.58
PTPRN-214ENST00000477819 TRPM3Q9HCF6 1732 aaPredicted RBP11.44□□□□□ -0.58
PTPRN-214ENST00000477819 MYOM1P52179 1685 aa11.44□□□□□ -0.58
PTPRN-214ENST00000477819 KNDC1Q76NI1 1749 aa11.43□□□□□ -0.58
PTPRN-214ENST00000477819 CHRM1P11229 460 aaPredicted RBP11.43□□□□□ -0.58
PTPRN-214ENST00000477819 PLCG2P16885 1265 aa11.43□□□□□ -0.58
PTPRN-214ENST00000477819 PTGER2P43116 358 aa11.43□□□□□ -0.58
PTPRN-214ENST00000477819 RGL3Q3MIN7 710 aa11.43□□□□□ -0.58
PTPRN-214ENST00000477819 YTHDC2Q9H6S0 1430 aaKnown RBP11.43□□□□□ -0.58
PTPRN-214ENST00000477819 ALS2Q96Q42 1657 aa11.43□□□□□ -0.58
PTPRN-214ENST00000477819 CASZ1Q86V15 1759 aa11.42□□□□□ -0.58
PTPRN-214ENST00000477819 SYT17Q9BSW7 474 aa11.42□□□□□ -0.58
PTPRN-214ENST00000477819 FHDC1Q9C0D6 1143 aaPredicted RBP11.42□□□□□ -0.58
PTPRN-214ENST00000477819 KIAA0232Q92628 1395 aa11.41□□□□□ -0.58
PTPRN-214ENST00000477819 IRX5P78411 483 aaPredicted RBP11.41□□□□□ -0.58
PTPRN-214ENST00000477819 PTF1AQ7RTS3 328 aa11.41□□□□□ -0.58
PTPRN-214ENST00000477819 CRYBG1Q9Y4K1 1723 aa11.4□□□□□ -0.58
PTPRN-214ENST00000477819 ZC3H6P61129 1189 aaKnown RBP11.4□□□□□ -0.58
PTPRN-214ENST00000477819 PRAM1Q96QH2 718 aa11.4□□□□□ -0.58
PTPRN-214ENST00000477819 GOLGB1Q14789 3259 aaKnown RBP11.4□□□□□ -0.58
PTPRN-214ENST00000477819 ACIN1Q9UKV3 1341 aaKnown RBP11.39□□□□□ -0.59
PTPRN-214ENST00000477819 GIGYF1O75420 1035 aaPredicted RBP11.39□□□□□ -0.59
PTPRN-214ENST00000477819 PSEN1P49768 467 aa11.39□□□□□ -0.59
PTPRN-214ENST00000477819 EVA1CP58658 441 aa11.39□□□□□ -0.59
PTPRN-214ENST00000477819 LARP1Q6PKG0 1096 aaKnown RBP11.39□□□□□ -0.59
PTPRN-214ENST00000477819 BARGINQ6ZT62 677 aa11.39□□□□□ -0.59
PTPRN-214ENST00000477819 SIRT1Q96EB6 747 aa11.39□□□□□ -0.59
PTPRN-214ENST00000477819 GPRASP1Q5JY77 1395 aa11.39□□□□□ -0.59
PTPRN-214ENST00000477819 NUTM2GQ5VZR2 741 aa11.38□□□□□ -0.59
PTPRN-214ENST00000477819 HIRIP3Q9BW71 556 aaPredicted RBP11.38□□□□□ -0.59
PTPRN-214ENST00000477819 BCL11BQ9C0K0 894 aaPredicted RBP11.38□□□□□ -0.59
PTPRN-214ENST00000477819 PRR36Q9H6K5 1346 aa11.37□□□□□ -0.59
PTPRN-214ENST00000477819 TCP11L2Q8N4U5 519 aa11.37□□□□□ -0.59
PTPRN-214ENST00000477819 SSH2Q76I76 1423 aa11.36□□□□□ -0.59
PTPRN-214ENST00000477819 ANKARQ7Z5J8 1434 aa11.36□□□□□ -0.59
PTPRN-214ENST00000477819 PIK3C2GO75747 1445 aa11.35□□□□□ -0.59
PTPRN-214ENST00000477819 PLSCR1O15162 318 aa11.35□□□□□ -0.59
PTPRN-214ENST00000477819 CFAP70Q5T0N1 1121 aa11.35□□□□□ -0.59
PTPRN-214ENST00000477819 PPARGC1BQ86YN6 1023 aaKnown RBP11.35□□□□□ -0.59
PTPRN-214ENST00000477819 NGDNQ8NEJ9 315 aaKnown RBP11.35□□□□□ -0.59
PTPRN-214ENST00000477819 OCEL1Q9H607 264 aa11.35□□□□□ -0.59
PTPRN-214ENST00000477819 POGKQ9P215 609 aa11.35□□□□□ -0.59
PTPRN-214ENST00000477819 ANKRD30BQ9BXX2 1392 aa11.34□□□□□ -0.59
PTPRN-214ENST00000477819 GOLGA2Q08379 1002 aa11.34□□□□□ -0.59
PTPRN-214ENST00000477819 GPR162Q16538 588 aa11.34□□□□□ -0.59
PTPRN-214ENST00000477819 C14orf93Q9H972 538 aaKnown RBP11.34□□□□□ -0.59
PTPRN-214ENST00000477819 SBF2Q86WG5 1849 aa11.34□□□□□ -0.59
PTPRN-214ENST00000477819 SPATA31E1Q6ZUB1 1445 aa11.34□□□□□ -0.59
PTPRN-214ENST00000477819 PDAP1Q13442 181 aaKnown RBP11.33□□□□□ -0.6
PTPRN-214ENST00000477819 MINK1Q8N4C8 1332 aaPredicted RBP11.33□□□□□ -0.6
PTPRN-214ENST00000477819 PEAK1Q9H792 1746 aa11.32□□□□□ -0.6
PTPRN-214ENST00000477819 DHX57Q6P158 1386 aaKnown RBP11.32□□□□□ -0.6
PTPRN-214ENST00000477819 PHRF1Q9P1Y6 1649 aaKnown RBP11.32□□□□□ -0.6
PTPRN-214ENST00000477819 RGPD3A6NKT7 1758 aaPredicted RBP11.32□□□□□ -0.6
PTPRN-214ENST00000477819 RGPD4Q7Z3J3 1758 aa11.32□□□□□ -0.6
PTPRN-214ENST00000477819 DLC1Q96QB1 1528 aa11.32□□□□□ -0.6
PTPRN-214ENST00000477819 MKRN3Q13064 507 aaKnown RBP11.32□□□□□ -0.6
PTPRN-214ENST00000477819 ARXQ96QS3 562 aa11.32□□□□□ -0.6
PTPRN-214ENST00000477819 STK32BQ9NY57 414 aa11.32□□□□□ -0.6
PTPRN-214ENST00000477819 SLC15A2Q16348 729 aa11.31□□□□□ -0.6
PTPRN-214ENST00000477819 MTFR1LQ9H019 292 aa11.31□□□□□ -0.6
PTPRN-214ENST00000477819 OVOS2A0A0G2JMS6 1433 aa11.31□□□□□ -0.6
PTPRN-214ENST00000477819 OVOS2A0A0J9YW53 1432 aa11.31□□□□□ -0.6
PTPRN-214ENST00000477819 OVOS2Q6IE36 1432 aa11.31□□□□□ -0.6
PTPRN-214ENST00000477819 PARP4Q9UKK3 1724 aaKnown RBP11.31□□□□□ -0.6
PTPRN-214ENST00000477819 SHANK3Q9BYB0 1731 aa11.3□□□□□ -0.6
PTPRN-214ENST00000477819 POTEMA6NI47 508 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms