RNA–Protein interactions for RNA: ENST00000477702.1

LINC00173-202, long intergenic non-protein coding RNA 173, humanhuman

TSL 3

Gene LINC00173, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-202ENST00000477702 ZDHHC16Q969W1 377 aa9.71□□□□□ -0.86
LINC00173-202ENST00000477702 SLC52A1Q9NWF4 448 aa9.71□□□□□ -0.86
LINC00173-202ENST00000477702 AMOTL2Q9Y2J4 779 aa9.71□□□□□ -0.86
LINC00173-202ENST00000477702 ATRNO75882 1429 aa9.71□□□□□ -0.86
LINC00173-202ENST00000477702 NOS1P29475 1434 aa9.71□□□□□ -0.86
LINC00173-202ENST00000477702 MST1RQ04912 1400 aa9.71□□□□□ -0.86
LINC00173-202ENST00000477702 ADAMTS13Q76LX8 1427 aa9.71□□□□□ -0.86
LINC00173-202ENST00000477702 LRP5O75197 1615 aa9.71□□□□□ -0.86
LINC00173-202ENST00000477702 NHSL1Q5SYE7 1610 aa9.71□□□□□ -0.86
LINC00173-202ENST00000477702 HDGFP51858 240 aaKnown RBP9.7□□□□□ -0.86
LINC00173-202ENST00000477702 LCE2DQ5TA82 110 aaPredicted RBP9.7□□□□□ -0.86
LINC00173-202ENST00000477702 FNBP4Q8N3X1 1017 aaPredicted RBP9.7□□□□□ -0.86
LINC00173-202ENST00000477702 FECHP22830 423 aa9.69□□□□□ -0.86
LINC00173-202ENST00000477702 BLMP54132 1417 aaPredicted RBP9.69□□□□□ -0.86
LINC00173-202ENST00000477702 PTPRUQ92729 1446 aa9.69□□□□□ -0.86
LINC00173-202ENST00000477702 ERBINQ96RT1 1412 aa9.69□□□□□ -0.86
LINC00173-202ENST00000477702 SLC24A3Q9HC58 644 aa9.69□□□□□ -0.86
LINC00173-202ENST00000477702 NPDC1Q9NQX5 325 aaPredicted RBP9.69□□□□□ -0.86
LINC00173-202ENST00000477702 MYO5BQ9ULV0 1848 aa9.68□□□□□ -0.86
LINC00173-202ENST00000477702 HRCP23327 699 aa9.68□□□□□ -0.86
LINC00173-202ENST00000477702 YY1P25490 414 aa9.68□□□□□ -0.86
LINC00173-202ENST00000477702 FBXW7Q969H0 707 aa9.68□□□□□ -0.86
LINC00173-202ENST00000477702 DCCP43146 1447 aa9.67□□□□□ -0.86
LINC00173-202ENST00000477702 PTGDRQ13258 359 aa9.67□□□□□ -0.86
LINC00173-202ENST00000477702 SF3B2Q13435 895 aaKnown RBP9.67□□□□□ -0.86
LINC00173-202ENST00000477702 C6orf132Q5T0Z8 1188 aa9.67□□□□□ -0.86
LINC00173-202ENST00000477702 BARGINQ6ZT62 677 aa9.67□□□□□ -0.86
LINC00173-202ENST00000477702 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.67□□□□□ -0.86
LINC00173-202ENST00000477702 LMTK2Q8IWU2 1503 aa9.66□□□□□ -0.86
LINC00173-202ENST00000477702 PIK3R4Q99570 1358 aa9.66□□□□□ -0.86
LINC00173-202ENST00000477702 EMP3P54852 163 aa9.66□□□□□ -0.86
LINC00173-202ENST00000477702 PPP4R3BQ5MIZ7 849 aa9.66□□□□□ -0.86
LINC00173-202ENST00000477702 VARS2Q5ST30 1063 aaKnown RBP9.66□□□□□ -0.86
LINC00173-202ENST00000477702 GJD4Q96KN9 370 aaPredicted RBP9.66□□□□□ -0.86
LINC00173-202ENST00000477702 MYOM3Q5VTT5 1437 aa9.65□□□□□ -0.86
LINC00173-202ENST00000477702 GCC2Q8IWJ2 1684 aa9.65□□□□□ -0.86
LINC00173-202ENST00000477702 ERBB3P21860 1342 aa9.65□□□□□ -0.86
LINC00173-202ENST00000477702 POTEB3A0JP26 581 aa9.65□□□□□ -0.86
LINC00173-202ENST00000477702 FCHSD2O94868 740 aa9.65□□□□□ -0.86
LINC00173-202ENST00000477702 POTEBQ6S5H4 581 aa9.65□□□□□ -0.86
LINC00173-202ENST00000477702 TRPM2O94759 1503 aa9.65□□□□□ -0.86
LINC00173-202ENST00000477702 BCL9LQ86UU0 1499 aa9.65□□□□□ -0.87
LINC00173-202ENST00000477702 PTCH1Q13635 1447 aa9.65□□□□□ -0.87
LINC00173-202ENST00000477702 TMEM131LA2VDJ0 1609 aa9.64□□□□□ -0.87
LINC00173-202ENST00000477702 COL9A1P20849 921 aa9.64□□□□□ -0.87
LINC00173-202ENST00000477702 CHIC2Q9UKJ5 165 aa9.64□□□□□ -0.87
LINC00173-202ENST00000477702 ABCC5O15440 1437 aa9.64□□□□□ -0.87
LINC00173-202ENST00000477702 FAM205CA6NFA0 338 aa9.63□□□□□ -0.87
LINC00173-202ENST00000477702 GNPATO15228 680 aa9.63□□□□□ -0.87
LINC00173-202ENST00000477702 ORAI2Q96SN7 254 aa9.63□□□□□ -0.87
LINC00173-202ENST00000477702 SOS2Q07890 1332 aaPredicted RBP9.62□□□□□ -0.87
LINC00173-202ENST00000477702 R3HDM1Q15032 1099 aaKnown RBP9.62□□□□□ -0.87
LINC00173-202ENST00000477702 KRI1Q8N9T8 703 aaKnown RBP9.62□□□□□ -0.87
LINC00173-202ENST00000477702 BCL2L12Q9HB09 334 aa9.62□□□□□ -0.87
LINC00173-202ENST00000477702 C1orf167Q5SNV9 1468 aa9.61□□□□□ -0.87
LINC00173-202ENST00000477702 RALGAPBQ86X10 1494 aa9.61□□□□□ -0.87
LINC00173-202ENST00000477702 HIC1Q14526 733 aa9.61□□□□□ -0.87
LINC00173-202ENST00000477702 POTEEQ6S8J3 1075 aa9.61□□□□□ -0.87
LINC00173-202ENST00000477702 SEPT12Q8IYM1 358 aa9.61□□□□□ -0.87
LINC00173-202ENST00000477702 ADGRL3Q9HAR2 1447 aa9.61□□□□□ -0.87
LINC00173-202ENST00000477702 XRN1Q8IZH2 1706 aaKnown RBP9.6□□□□□ -0.87
LINC00173-202ENST00000477702 KANK4Q5T7N3 995 aaPredicted RBP9.6□□□□□ -0.87
LINC00173-202ENST00000477702 IFFO2Q5TF58 517 aa9.6□□□□□ -0.87
LINC00173-202ENST00000477702 AXIN2Q9Y2T1 843 aa9.6□□□□□ -0.87
LINC00173-202ENST00000477702 METP08581 1390 aa9.6□□□□□ -0.87
LINC00173-202ENST00000477702 MYOM2P54296 1465 aa9.59□□□□□ -0.87
LINC00173-202ENST00000477702 GLI3P10071 1580 aa9.59□□□□□ -0.87
LINC00173-202ENST00000477702 BAG6P46379 1132 aa9.59□□□□□ -0.87
LINC00173-202ENST00000477702 PSEN2P49810 448 aa9.59□□□□□ -0.87
LINC00173-202ENST00000477702 XPCQ01831 940 aaPredicted RBP9.59□□□□□ -0.87
LINC00173-202ENST00000477702 FAM161AQ3B820 660 aa9.59□□□□□ -0.87
LINC00173-202ENST00000477702 KCNK17Q96T54 332 aa9.59□□□□□ -0.87
LINC00173-202ENST00000477702 BRWD3Q6RI45 1802 aa9.59□□□□□ -0.88
LINC00173-202ENST00000477702 UNC13BO14795 1591 aa9.58□□□□□ -0.88
LINC00173-202ENST00000477702 CROCC2H7BZ55 1655 aa9.58□□□□□ -0.88
LINC00173-202ENST00000477702 PTPREP23469 700 aa9.58□□□□□ -0.88
LINC00173-202ENST00000477702 PADI6Q6TGC4 694 aa9.58□□□□□ -0.88
LINC00173-202ENST00000477702 UNC5CLQ8IV45 518 aa9.58□□□□□ -0.88
LINC00173-202ENST00000477702 HS3ST6Q96QI5 342 aa9.58□□□□□ -0.88
LINC00173-202ENST00000477702 ANKRD30AQ9BXX3 1397 aa9.58□□□□□ -0.88
LINC00173-202ENST00000477702 RPRD2Q5VT52 1461 aaKnown RBP9.58□□□□□ -0.88
LINC00173-202ENST00000477702 DAPK1P53355 1430 aa9.57□□□□□ -0.88
LINC00173-202ENST00000477702 NALCNQ8IZF0 1738 aa9.57□□□□□ -0.88
LINC00173-202ENST00000477702 MAP2K5Q13163 448 aa9.57□□□□□ -0.88
LINC00173-202ENST00000477702 KRT27Q7Z3Y8 459 aa9.57□□□□□ -0.88
LINC00173-202ENST00000477702 CCDC102AQ96A19 550 aa9.57□□□□□ -0.88
LINC00173-202ENST00000477702 FAM198AQ9UFP1 575 aa9.57□□□□□ -0.88
LINC00173-202ENST00000477702 COL22A1Q8NFW1 1626 aaPredicted RBP9.56□□□□□ -0.88
LINC00173-202ENST00000477702 A0A0G2JS52 829 aa9.56□□□□□ -0.88
LINC00173-202ENST00000477702 IRF6O14896 467 aa9.56□□□□□ -0.88
LINC00173-202ENST00000477702 MYT1Q01538 1121 aa9.56□□□□□ -0.88
LINC00173-202ENST00000477702 CCDC9Q9Y3X0 531 aaKnown RBP9.56□□□□□ -0.88
LINC00173-202ENST00000477702 LAMC1P11047 1609 aa9.56□□□□□ -0.88
LINC00173-202ENST00000477702 NRXN3Q9Y4C0 1643 aa9.56□□□□□ -0.88
LINC00173-202ENST00000477702 SENP3-EIF4A1A0A087X0R7 540 aa9.55□□□□□ -0.88
LINC00173-202ENST00000477702 CDCA7LQ96GN5 454 aa9.55□□□□□ -0.88
LINC00173-202ENST00000477702 AK7Q96M32 723 aa9.55□□□□□ -0.88
LINC00173-202ENST00000477702 MINK1Q8N4C8 1332 aaPredicted RBP9.55□□□□□ -0.88
LINC00173-202ENST00000477702 PPP1R3GB7ZBB8 358 aa9.54□□□□□ -0.88
LINC00173-202ENST00000477702 C3orf80F5H4A9 247 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms