RNA–Protein interactions for RNA: ENST00000477693.1

NIFK-205, Transcript of nucleolar protein interacting with the FHA domain of MKI67, humanhuman

TSL 1 (best)

Gene NIFK, Length 1,096 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFK-205ENST00000477693 GJD4Q96KN9 370 aaPredicted RBP13.58□□□□□ -0.24
NIFK-205ENST00000477693 BTG4Q9NY30 223 aa13.58□□□□□ -0.24
NIFK-205ENST00000477693 LMO7Q8WWI1 1683 aa13.57□□□□□ -0.24
NIFK-205ENST00000477693 NME9Q86XW9 330 aa13.57□□□□□ -0.24
NIFK-205ENST00000477693 NFAT5O94916 1531 aa13.57□□□□□ -0.24
NIFK-205ENST00000477693 OVOS2A0A0J9YW53 1432 aa13.56□□□□□ -0.24
NIFK-205ENST00000477693 RGS12O14924 1447 aa13.56□□□□□ -0.24
NIFK-205ENST00000477693 OVOS2Q6IE36 1432 aa13.56□□□□□ -0.24
NIFK-205ENST00000477693 CHRNA2Q15822 529 aa13.56□□□□□ -0.24
NIFK-205ENST00000477693 GLI3P10071 1580 aa13.56□□□□□ -0.24
NIFK-205ENST00000477693 ZRANB1Q9UGI0 708 aa13.55□□□□□ -0.24
NIFK-205ENST00000477693 AATKQ6ZMQ8 1374 aa13.55□□□□□ -0.24
NIFK-205ENST00000477693 CAMTA1Q9Y6Y1 1673 aa13.54□□□□□ -0.24
NIFK-205ENST00000477693 ARHGEF25Q86VW2 580 aa13.54□□□□□ -0.24
NIFK-205ENST00000477693 ABCC6O95255 1503 aa13.54□□□□□ -0.24
NIFK-205ENST00000477693 C11orf95C9JLR9 678 aaPredicted RBP13.52□□□□□ -0.25
NIFK-205ENST00000477693 ONECUT3O60422 494 aaPredicted RBP13.52□□□□□ -0.25
NIFK-205ENST00000477693 CARD14Q9BXL6 1004 aa13.52□□□□□ -0.25
NIFK-205ENST00000477693 SPATA31A5Q5VU36 1347 aa13.52□□□□□ -0.25
NIFK-205ENST00000477693 SPATA31A7Q8IWB4 1347 aa13.52□□□□□ -0.25
NIFK-205ENST00000477693 COL5A2P05997 1499 aaPredicted RBP13.52□□□□□ -0.25
NIFK-205ENST00000477693 COL18A1P39060 1754 aa13.52□□□□□ -0.25
NIFK-205ENST00000477693 NSD3Q9BZ95 1437 aa13.51□□□□□ -0.25
NIFK-205ENST00000477693 FYB1O15117 783 aa13.51□□□□□ -0.25
NIFK-205ENST00000477693 COG3Q96JB2 828 aa13.51□□□□□ -0.25
NIFK-205ENST00000477693 CCDC9Q9Y3X0 531 aaKnown RBP13.51□□□□□ -0.25
NIFK-205ENST00000477693 SPATA31A1Q5TZJ5 1347 aa13.5□□□□□ -0.25
NIFK-205ENST00000477693 SOX12O15370 315 aa13.5□□□□□ -0.25
NIFK-205ENST00000477693 POLR3GLQ9BT43 218 aa13.5□□□□□ -0.25
NIFK-205ENST00000477693 STRN4Q9NRL3 753 aa13.5□□□□□ -0.25
NIFK-205ENST00000477693 SRCAPQ6ZRS2 3230 aa13.5□□□□□ -0.25
NIFK-205ENST00000477693 KIF7Q2M1P5 1343 aa13.49□□□□□ -0.25
NIFK-205ENST00000477693 EVA1CP58658 441 aa13.49□□□□□ -0.25
NIFK-205ENST00000477693 AXIN2Q9Y2T1 843 aa13.49□□□□□ -0.25
NIFK-205ENST00000477693 KIF20BQ96Q89 1820 aa13.48□□□□□ -0.25
NIFK-205ENST00000477693 ZBTB7CA1YPR0 619 aa13.48□□□□□ -0.25
NIFK-205ENST00000477693 LARP1Q6PKG0 1096 aaKnown RBP13.48□□□□□ -0.25
NIFK-205ENST00000477693 GGNBP2Q9H3C7 697 aa13.48□□□□□ -0.25
NIFK-205ENST00000477693 CRB1P82279 1406 aa13.47□□□□□ -0.25
NIFK-205ENST00000477693 SEPT12Q8IYM1 358 aa13.47□□□□□ -0.25
NIFK-205ENST00000477693 LTN1O94822 1766 aa13.47□□□□□ -0.25
NIFK-205ENST00000477693 THSD7AQ9UPZ6 1657 aa13.47□□□□□ -0.25
NIFK-205ENST00000477693 CGNL1Q0VF96 1302 aa13.46□□□□□ -0.25
NIFK-205ENST00000477693 WDR17Q8IZU2 1322 aa13.46□□□□□ -0.25
NIFK-205ENST00000477693 FAM98CQ17RN3 349 aaKnown RBP13.46□□□□□ -0.25
NIFK-205ENST00000477693 BARGINQ6ZT62 677 aa13.46□□□□□ -0.25
NIFK-205ENST00000477693 PANK3Q9H999 370 aa13.46□□□□□ -0.25
NIFK-205ENST00000477693 THRAP3Q9Y2W1 955 aaKnown RBP13.46□□□□□ -0.25
NIFK-205ENST00000477693 BLMP54132 1417 aaPredicted RBP13.46□□□□□ -0.26
NIFK-205ENST00000477693 TCP11L2Q8N4U5 519 aa13.45□□□□□ -0.26
NIFK-205ENST00000477693 MAP3K19Q56UN5 1328 aa13.44□□□□□ -0.26
NIFK-205ENST00000477693 RTL1A6NKG5 1358 aa13.44□□□□□ -0.26
NIFK-205ENST00000477693 CCDC7Q96M83 1385 aa13.44□□□□□ -0.26
NIFK-205ENST00000477693 ERBB3P21860 1342 aa13.43□□□□□ -0.26
NIFK-205ENST00000477693 WASHC2AQ641Q2 1341 aa13.43□□□□□ -0.26
NIFK-205ENST00000477693 RGPD5Q99666 1765 aa13.43□□□□□ -0.26
NIFK-205ENST00000477693 IP6K1Q92551 441 aa13.43□□□□□ -0.26
NIFK-205ENST00000477693 USP35Q9P2H5 1018 aa13.43□□□□□ -0.26
NIFK-205ENST00000477693 NSD2O96028 1365 aa13.43□□□□□ -0.26
NIFK-205ENST00000477693 EP400Q96L91 3159 aa13.42□□□□□ -0.26
NIFK-205ENST00000477693 BRWD3Q6RI45 1802 aa13.42□□□□□ -0.26
NIFK-205ENST00000477693 FBLN1P23142 703 aa13.42□□□□□ -0.26
NIFK-205ENST00000477693 TOM1L2Q6ZVM7 507 aa13.42□□□□□ -0.26
NIFK-205ENST00000477693 KIF24Q5T7B8 1368 aa13.42□□□□□ -0.26
NIFK-205ENST00000477693 A0A0G2JS52 829 aa13.41□□□□□ -0.26
NIFK-205ENST00000477693 HOXC9P31274 260 aa13.41□□□□□ -0.26
NIFK-205ENST00000477693 MYT1Q01538 1121 aa13.41□□□□□ -0.26
NIFK-205ENST00000477693 KRT27Q7Z3Y8 459 aa13.41□□□□□ -0.26
NIFK-205ENST00000477693 CARD10Q9BWT7 1032 aa13.41□□□□□ -0.26
NIFK-205ENST00000477693 ANKRD26Q9UPS8 1709 aa13.41□□□□□ -0.26
NIFK-205ENST00000477693 CSB-PGBD3P0DP91 1061 aa13.4□□□□□ -0.26
NIFK-205ENST00000477693 AMPHP49418 695 aa13.4□□□□□ -0.26
NIFK-205ENST00000477693 RRS1Q15050 365 aaKnown RBP13.4□□□□□ -0.26
NIFK-205ENST00000477693 ANKRD24Q8TF21 1146 aa13.4□□□□□ -0.26
NIFK-205ENST00000477693 PARP4Q9UKK3 1724 aaKnown RBP13.39□□□□□ -0.27
NIFK-205ENST00000477693 ZBTB12Q9Y330 459 aaPredicted RBP13.39□□□□□ -0.27
NIFK-205ENST00000477693 KNSTRNQ9Y448 316 aa13.39□□□□□ -0.27
NIFK-205ENST00000477693 FLT4P35916 1363 aa13.39□□□□□ -0.27
NIFK-205ENST00000477693 DISP2A7MBM2 1401 aa13.39□□□□□ -0.27
NIFK-205ENST00000477693 FAM208AQ9UK61 1670 aaKnown RBP13.38□□□□□ -0.27
NIFK-205ENST00000477693 PER1O15534 1290 aaPredicted RBP13.38□□□□□ -0.27
NIFK-205ENST00000477693 AMER1Q5JTC6 1135 aaPredicted RBP13.38□□□□□ -0.27
NIFK-205ENST00000477693 CDCA7Q9BWT1 371 aaPredicted RBP13.38□□□□□ -0.27
NIFK-205ENST00000477693 WNK3Q9BYP7 1800 aa13.38□□□□□ -0.27
NIFK-205ENST00000477693 PEAK1Q9H792 1746 aa13.38□□□□□ -0.27
NIFK-205ENST00000477693 INSRP06213 1382 aa13.37□□□□□ -0.27
NIFK-205ENST00000477693 LRRC37A3O60309 1634 aa13.36□□□□□ -0.27
NIFK-205ENST00000477693 CCDC125Q86Z20 511 aa13.36□□□□□ -0.27
NIFK-205ENST00000477693 NLRP2Q9NX02 1062 aa13.36□□□□□ -0.27
NIFK-205ENST00000477693 EMILIN1Q9Y6C2 1016 aa13.36□□□□□ -0.27
NIFK-205ENST00000477693 HSP90AB2PQ58FF8 381 aa13.35□□□□□ -0.27
NIFK-205ENST00000477693 POLKQ9UBT6 870 aa13.35□□□□□ -0.27
NIFK-205ENST00000477693 SMG6Q86US8 1419 aaKnown RBP13.35□□□□□ -0.27
NIFK-205ENST00000477693 NPC1L1Q9UHC9 1359 aa13.34□□□□□ -0.27
NIFK-205ENST00000477693 PDE3BQ13370 1112 aa13.34□□□□□ -0.27
NIFK-205ENST00000477693 MKRN4PQ13434 485 aaPredicted RBP13.34□□□□□ -0.27
NIFK-205ENST00000477693 DIEXFQ68CQ4 756 aaKnown RBP13.34□□□□□ -0.27
NIFK-205ENST00000477693 MORC1Q86VD1 984 aa13.34□□□□□ -0.27
NIFK-205ENST00000477693 LTV1Q96GA3 475 aaPredicted RBP13.34□□□□□ -0.27
NIFK-205ENST00000477693 IL2RBP14784 551 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms