RNA–Protein interactions for RNA: ENST00000477607.6

P4HB-211, Transcript of prolyl 4-hydroxylase subunit beta, humanhuman

TSL 1 (best)

Gene P4HB, Length 1,110 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
P4HB-211ENST00000477607 DDB1Q16531 1140 aa22.35■■□□□ 1.17
P4HB-211ENST00000477607 NBPF1Q3BBV0 1214 aa22.35■■□□□ 1.17
P4HB-211ENST00000477607 CENPJQ9HC77 1338 aaPredicted RBP22.34■■□□□ 1.17
P4HB-211ENST00000477607 PTF1AQ7RTS3 328 aa22.34■■□□□ 1.17
P4HB-211ENST00000477607 NLRP6P59044 892 aa22.33■■□□□ 1.17
P4HB-211ENST00000477607 TOM1L2Q6ZVM7 507 aa22.33■■□□□ 1.17
P4HB-211ENST00000477607 CPSF1Q10570 1443 aaKnown RBP22.32■■□□□ 1.16
P4HB-211ENST00000477607 CHD4Q14839 1912 aa22.32■■□□□ 1.16
P4HB-211ENST00000477607 BCL11BQ9C0K0 894 aaPredicted RBP22.32■■□□□ 1.16
P4HB-211ENST00000477607 PDGFDQ9GZP0 370 aaPredicted RBP22.32■■□□□ 1.16
P4HB-211ENST00000477607 TRPM1Q7Z4N2 1603 aa22.31■■□□□ 1.16
P4HB-211ENST00000477607 BCL9O00512 1426 aa22.3■■□□□ 1.16
P4HB-211ENST00000477607 WDR17Q8IZU2 1322 aa22.3■■□□□ 1.16
P4HB-211ENST00000477607 NHSQ6T4R5 1651 aa22.3■■□□□ 1.16
P4HB-211ENST00000477607 ZBTB7AO95365 584 aa22.28■■□□□ 1.16
P4HB-211ENST00000477607 MARCH10Q8NA82 808 aaPredicted RBP22.28■■□□□ 1.16
P4HB-211ENST00000477607 CABP1Q9NZU7 370 aa22.28■■□□□ 1.16
P4HB-211ENST00000477607 PROM2Q8N271 834 aa22.27■■□□□ 1.16
P4HB-211ENST00000477607 AXIN2Q9Y2T1 843 aa22.27■■□□□ 1.16
P4HB-211ENST00000477607 PTGER2P43116 358 aa22.25■■□□□ 1.15
P4HB-211ENST00000477607 NFAT5O94916 1531 aa22.25■■□□□ 1.15
P4HB-211ENST00000477607 MON2Q7Z3U7 1717 aa22.24■■□□□ 1.15
P4HB-211ENST00000477607 CDCA7Q9BWT1 371 aaPredicted RBP22.24■■□□□ 1.15
P4HB-211ENST00000477607 PAPPAQ13219 1627 aa22.24■■□□□ 1.15
P4HB-211ENST00000477607 TNS2Q63HR2 1409 aa22.23■■□□□ 1.15
P4HB-211ENST00000477607 LTN1O94822 1766 aa22.23■■□□□ 1.15
P4HB-211ENST00000477607 BTAF1O14981 1849 aa22.23■■□□□ 1.15
P4HB-211ENST00000477607 ATF5Q9Y2D1 282 aaPredicted RBP22.23■■□□□ 1.15
P4HB-211ENST00000477607 ABCC6O95255 1503 aa22.22■■□□□ 1.15
P4HB-211ENST00000477607 TXNRD1Q16881 649 aa22.22■■□□□ 1.15
P4HB-211ENST00000477607 STK32BQ9NY57 414 aa22.22■■□□□ 1.15
P4HB-211ENST00000477607 SOX12O15370 315 aa22.21■■□□□ 1.15
P4HB-211ENST00000477607 CSB-PGBD3P0DP91 1061 aa22.21■■□□□ 1.15
P4HB-211ENST00000477607 ARHGEF25Q86VW2 580 aa22.21■■□□□ 1.15
P4HB-211ENST00000477607 CARD10Q9BWT7 1032 aa22.2■■□□□ 1.14
P4HB-211ENST00000477607 USP54Q70EL1 1684 aa22.2■■□□□ 1.14
P4HB-211ENST00000477607 KAT6BQ8WYB5 2073 aa22.19■■□□□ 1.14
P4HB-211ENST00000477607 SLC15A2Q16348 729 aa22.19■■□□□ 1.14
P4HB-211ENST00000477607 ZNF784Q8NCA9 323 aaPredicted RBP22.19■■□□□ 1.14
P4HB-211ENST00000477607 FHDC1Q9C0D6 1143 aaPredicted RBP22.19■■□□□ 1.14
P4HB-211ENST00000477607 CCDC7Q96M83 1385 aa22.18■■□□□ 1.14
P4HB-211ENST00000477607 TTC21BQ7Z4L5 1316 aa22.18■■□□□ 1.14
P4HB-211ENST00000477607 EVC2Q86UK5 1308 aa22.18■■□□□ 1.14
P4HB-211ENST00000477607 KCNH5Q8NCM2 988 aa22.18■■□□□ 1.14
P4HB-211ENST00000477607 SYT17Q9BSW7 474 aa22.16■■□□□ 1.14
P4HB-211ENST00000477607 QSER1Q2KHR3 1735 aa22.15■■□□□ 1.14
P4HB-211ENST00000477607 EXOC5O00471 708 aa22.15■■□□□ 1.14
P4HB-211ENST00000477607 MTFR1LQ9H019 292 aa22.15■■□□□ 1.14
P4HB-211ENST00000477607 TTC21AQ8NDW8 1320 aa22.14■■□□□ 1.14
P4HB-211ENST00000477607 SGIP1Q9BQI5 828 aa22.14■■□□□ 1.13
P4HB-211ENST00000477607 TUBGCP6Q96RT7 1819 aa22.13■■□□□ 1.13
P4HB-211ENST00000477607 UTRNP46939 3433 aa22.12■■□□□ 1.13
P4HB-211ENST00000477607 ZNF692Q9BU19 519 aaPredicted RBP22.12■■□□□ 1.13
P4HB-211ENST00000477607 ACSBG1Q96GR2 724 aa22.11■■□□□ 1.13
P4HB-211ENST00000477607 KTN1Q86UP2 1357 aaKnown RBP22.11■■□□□ 1.13
P4HB-211ENST00000477607 COL24A1Q17RW2 1714 aa22.1■■□□□ 1.13
P4HB-211ENST00000477607 ERBB3P21860 1342 aa22.07■■□□□ 1.12
P4HB-211ENST00000477607 ARXQ96QS3 562 aa22.07■■□□□ 1.12
P4HB-211ENST00000477607 ROCK2O75116 1388 aaKnown RBP22.07■■□□□ 1.12
P4HB-211ENST00000477607 MAP3K5Q99683 1374 aa22.07■■□□□ 1.12
P4HB-211ENST00000477607 FAM208AQ9UK61 1670 aaKnown RBP22.07■■□□□ 1.12
P4HB-211ENST00000477607 L3MBTL2Q969R5 705 aa22.06■■□□□ 1.12
P4HB-211ENST00000477607 SENP3-EIF4A1A0A087X0R7 540 aa22.05■■□□□ 1.12
P4HB-211ENST00000477607 ZNF827Q17R98 1081 aa22.05■■□□□ 1.12
P4HB-211ENST00000477607 DOT1LQ8TEK3 1739 aa22.05■■□□□ 1.12
P4HB-211ENST00000477607 NLRP2Q9NX02 1062 aa22.04■■□□□ 1.12
P4HB-211ENST00000477607 USP31Q70CQ4 1352 aa22.03■■□□□ 1.12
P4HB-211ENST00000477607 IL2RBP14784 551 aa22.03■■□□□ 1.12
P4HB-211ENST00000477607 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.03■■□□□ 1.12
P4HB-211ENST00000477607 LY75O60449 1722 aa22.03■■□□□ 1.12
P4HB-211ENST00000477607 CD163L1Q9NR16 1453 aa22.03■■□□□ 1.12
P4HB-211ENST00000477607 SHANK3Q9BYB0 1731 aa22.01■■□□□ 1.11
P4HB-211ENST00000477607 C1QTNF8P60827 252 aa22.01■■□□□ 1.11
P4HB-211ENST00000477607 RGPD2P0DJD1 1756 aa22■■□□□ 1.11
P4HB-211ENST00000477607 NME9Q86XW9 330 aa22■■□□□ 1.11
P4HB-211ENST00000477607 LRRC4BQ9NT99 713 aa22■■□□□ 1.11
P4HB-211ENST00000477607 SBNO2Q9Y2G9 1366 aa21.99■■□□□ 1.11
P4HB-211ENST00000477607 ANKRD24Q8TF21 1146 aa21.99■■□□□ 1.11
P4HB-211ENST00000477607 KLHL34Q8N239 644 aa21.98■■□□□ 1.11
P4HB-211ENST00000477607 GPR162Q16538 588 aa21.97■■□□□ 1.11
P4HB-211ENST00000477607 AKT1S1Q96B36 256 aa21.95■■□□□ 1.1
P4HB-211ENST00000477607 SIN3AQ96ST3 1273 aa21.94■■□□□ 1.1
P4HB-211ENST00000477607 PNPLA7Q6ZV29 1317 aa21.94■■□□□ 1.1
P4HB-211ENST00000477607 EDC4Q6P2E9 1401 aaKnown RBP21.94■■□□□ 1.1
P4HB-211ENST00000477607 SLC27A3Q5K4L6 730 aa21.92■■□□□ 1.1
P4HB-211ENST00000477607 PELP1Q8IZL8 1130 aaKnown RBP21.92■■□□□ 1.1
P4HB-211ENST00000477607 SLC16A10Q8TF71 515 aa21.92■■□□□ 1.1
P4HB-211ENST00000477607 POLD1P28340 1107 aa21.91■■□□□ 1.1
P4HB-211ENST00000477607 A0A1W2PP64 1363 aa21.9■■□□□ 1.1
P4HB-211ENST00000477607 GIGYF1O75420 1035 aaPredicted RBP21.9■■□□□ 1.1
P4HB-211ENST00000477607 KCNQ4P56696 695 aa21.9■■□□□ 1.1
P4HB-211ENST00000477607 DDX54Q8TDD1 881 aaKnown RBP21.9■■□□□ 1.1
P4HB-211ENST00000477607 TMC1Q8TDI8 760 aa21.9■■□□□ 1.1
P4HB-211ENST00000477607 HDGFL2Q7Z4V5 671 aaPredicted RBP21.89■■□□□ 1.09
P4HB-211ENST00000477607 NLGN2Q8NFZ4 835 aa21.89■■□□□ 1.09
P4HB-211ENST00000477607 C5P01031 1676 aa21.88■■□□□ 1.09
P4HB-211ENST00000477607 NEUROD1Q13562 356 aa21.88■■□□□ 1.09
P4HB-211ENST00000477607 SYTL4Q96C24 671 aaPredicted RBP21.88■■□□□ 1.09
P4HB-211ENST00000477607 TFCP2L1Q9NZI6 479 aa21.88■■□□□ 1.09
P4HB-211ENST00000477607 GOLGB1Q14789 3259 aaKnown RBP21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms