RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 EVA1CP58658 441 aa24.69■■□□□ 1.54
PTPN7-209ENST00000477554 MYT1Q01538 1121 aa24.69■■□□□ 1.54
PTPN7-209ENST00000477554 NINLQ9Y2I6 1382 aa24.68■■□□□ 1.54
PTPN7-209ENST00000477554 LTN1O94822 1766 aa24.67■■□□□ 1.54
PTPN7-209ENST00000477554 C11orf95C9JLR9 678 aaPredicted RBP24.67■■□□□ 1.54
PTPN7-209ENST00000477554 CARD14Q9BXL6 1004 aa24.66■■□□□ 1.54
PTPN7-209ENST00000477554 EIF4G2P78344 907 aaKnown RBP eCLIP24.65■■□□□ 1.54
PTPN7-209ENST00000477554 KRT27Q7Z3Y8 459 aa24.64■■□□□ 1.54
PTPN7-209ENST00000477554 KCNH5Q8NCM2 988 aa24.64■■□□□ 1.54
PTPN7-209ENST00000477554 POLR3GLQ9BT43 218 aa24.64■■□□□ 1.54
PTPN7-209ENST00000477554 SLC24A1O60721 1099 aa24.62■■□□□ 1.53
PTPN7-209ENST00000477554 GGNBP2Q9H3C7 697 aa24.61■■□□□ 1.53
PTPN7-209ENST00000477554 FYB1O15117 783 aa24.61■■□□□ 1.53
PTPN7-209ENST00000477554 CRB1P82279 1406 aa24.6■■□□□ 1.53
PTPN7-209ENST00000477554 TCP11L2Q8N4U5 519 aa24.59■■□□□ 1.53
PTPN7-209ENST00000477554 KIF20BQ96Q89 1820 aa24.58■■□□□ 1.53
PTPN7-209ENST00000477554 CDCA8Q53HL2 280 aa24.58■■□□□ 1.53
PTPN7-209ENST00000477554 NSD3Q9BZ95 1437 aa24.58■■□□□ 1.52
PTPN7-209ENST00000477554 BARGINQ6ZT62 677 aa24.57■■□□□ 1.52
PTPN7-209ENST00000477554 WDR17Q8IZU2 1322 aa24.56■■□□□ 1.52
PTPN7-209ENST00000477554 TOM1L2Q6ZVM7 507 aa24.56■■□□□ 1.52
PTPN7-209ENST00000477554 WNK3Q9BYP7 1800 aa24.56■■□□□ 1.52
PTPN7-209ENST00000477554 COG3Q96JB2 828 aa24.54■■□□□ 1.52
PTPN7-209ENST00000477554 PARP4Q9UKK3 1724 aaKnown RBP24.54■■□□□ 1.52
PTPN7-209ENST00000477554 DEFB132Q7Z7B7 95 aa24.53■■□□□ 1.52
PTPN7-209ENST00000477554 MAP3K19Q56UN5 1328 aa24.53■■□□□ 1.52
PTPN7-209ENST00000477554 LRRC37A3O60309 1634 aa24.53■■□□□ 1.52
PTPN7-209ENST00000477554 RRS1Q15050 365 aaKnown RBP24.52■■□□□ 1.52
PTPN7-209ENST00000477554 ABCC6O95255 1503 aa24.52■■□□□ 1.52
PTPN7-209ENST00000477554 CSB-PGBD3P0DP91 1061 aa24.52■■□□□ 1.52
PTPN7-209ENST00000477554 BLMP54132 1417 aaPredicted RBP24.51■■□□□ 1.51
PTPN7-209ENST00000477554 ERBB3P21860 1342 aa24.5■■□□□ 1.51
PTPN7-209ENST00000477554 PEAK1Q9H792 1746 aa24.5■■□□□ 1.51
PTPN7-209ENST00000477554 RGPD2P0DJD1 1756 aa24.49■■□□□ 1.51
PTPN7-209ENST00000477554 ANKRD24Q8TF21 1146 aa24.49■■□□□ 1.51
PTPN7-209ENST00000477554 THRAP3Q9Y2W1 955 aaKnown RBP24.49■■□□□ 1.51
PTPN7-209ENST00000477554 DISP2A7MBM2 1401 aa24.48■■□□□ 1.51
PTPN7-209ENST00000477554 LTV1Q96GA3 475 aaPredicted RBP24.48■■□□□ 1.51
PTPN7-209ENST00000477554 TNS1Q9HBL0 1735 aaKnown RBP24.48■■□□□ 1.51
PTPN7-209ENST00000477554 CARD10Q9BWT7 1032 aa24.47■■□□□ 1.51
PTPN7-209ENST00000477554 HOXC9P31274 260 aa24.46■■□□□ 1.51
PTPN7-209ENST00000477554 IP6K1Q92551 441 aa24.46■■□□□ 1.51
PTPN7-209ENST00000477554 PANK3Q9H999 370 aa24.46■■□□□ 1.51
PTPN7-209ENST00000477554 KIF7Q2M1P5 1343 aa24.46■■□□□ 1.51
PTPN7-209ENST00000477554 NLRP2Q9NX02 1062 aa24.44■■□□□ 1.5
PTPN7-209ENST00000477554 PDE3BQ13370 1112 aa24.43■■□□□ 1.5
PTPN7-209ENST00000477554 TRIM37O94972 964 aa24.42■■□□□ 1.5
PTPN7-209ENST00000477554 AMPHP49418 695 aa24.42■■□□□ 1.5
PTPN7-209ENST00000477554 PTF1AQ7RTS3 328 aa24.42■■□□□ 1.5
PTPN7-209ENST00000477554 CCDC125Q86Z20 511 aa24.42■■□□□ 1.5
PTPN7-209ENST00000477554 EMILIN1Q9Y6C2 1016 aa24.42■■□□□ 1.5
PTPN7-209ENST00000477554 RGPD1P0DJD0 1748 aa24.42■■□□□ 1.5
PTPN7-209ENST00000477554 MARCH10Q8NA82 808 aaPredicted RBP24.41■■□□□ 1.5
PTPN7-209ENST00000477554 FAM208AQ9UK61 1670 aaKnown RBP24.4■■□□□ 1.5
PTPN7-209ENST00000477554 DDB1Q16531 1140 aa24.39■■□□□ 1.5
PTPN7-209ENST00000477554 HSP90AB2PQ58FF8 381 aa24.39■■□□□ 1.5
PTPN7-209ENST00000477554 CCDC7Q96M83 1385 aa24.38■■□□□ 1.49
PTPN7-209ENST00000477554 ANKRD26Q9UPS8 1709 aa24.38■■□□□ 1.49
PTPN7-209ENST00000477554 EN1Q05925 392 aaPredicted RBP24.38■■□□□ 1.49
PTPN7-209ENST00000477554 FAM196AQ6ZSG2 479 aa24.38■■□□□ 1.49
PTPN7-209ENST00000477554 TNNT2P45379 298 aaPredicted RBP24.37■■□□□ 1.49
PTPN7-209ENST00000477554 SBF2Q86WG5 1849 aa24.37■■□□□ 1.49
PTPN7-209ENST00000477554 MAP2P11137 1827 aaKnown RBP24.37■■□□□ 1.49
PTPN7-209ENST00000477554 CGNL1Q0VF96 1302 aa24.37■■□□□ 1.49
PTPN7-209ENST00000477554 USHBP1Q8N6Y0 703 aa24.36■■□□□ 1.49
PTPN7-209ENST00000477554 SRCAPQ6ZRS2 3230 aa24.35■■□□□ 1.49
PTPN7-209ENST00000477554 SF3B2Q13435 895 aaKnown RBP24.35■■□□□ 1.49
PTPN7-209ENST00000477554 RTL1A6NKG5 1358 aa24.34■■□□□ 1.49
PTPN7-209ENST00000477554 NBPF6Q5VWK0 638 aa24.34■■□□□ 1.49
PTPN7-209ENST00000477554 NBPF4Q96M43 638 aa24.34■■□□□ 1.49
PTPN7-209ENST00000477554 WASHC2AQ641Q2 1341 aa24.33■■□□□ 1.49
PTPN7-209ENST00000477554 OVOS2A0A0G2JMS6 1433 aa24.33■■□□□ 1.49
PTPN7-209ENST00000477554 TNS2Q63HR2 1409 aa24.33■■□□□ 1.49
PTPN7-209ENST00000477554 MEGF6O75095 1541 aa24.32■■□□□ 1.48
PTPN7-209ENST00000477554 PPM1GO15355 546 aaPredicted RBP24.32■■□□□ 1.48
PTPN7-209ENST00000477554 IL2RBP14784 551 aa24.32■■□□□ 1.48
PTPN7-209ENST00000477554 EZH2Q15910 746 aaKnown RBP24.32■■□□□ 1.48
PTPN7-209ENST00000477554 SHANK3Q9BYB0 1731 aa24.3■■□□□ 1.48
PTPN7-209ENST00000477554 CDCA7Q9BWT1 371 aaPredicted RBP24.3■■□□□ 1.48
PTPN7-209ENST00000477554 POLKQ9UBT6 870 aa24.3■■□□□ 1.48
PTPN7-209ENST00000477554 FLT4P35916 1363 aa24.3■■□□□ 1.48
PTPN7-209ENST00000477554 INSRP06213 1382 aa24.29■■□□□ 1.48
PTPN7-209ENST00000477554 EXOC5O00471 708 aa24.29■■□□□ 1.48
PTPN7-209ENST00000477554 APBA3O96018 575 aa24.29■■□□□ 1.48
PTPN7-209ENST00000477554 BAG6P46379 1132 aa24.29■■□□□ 1.48
PTPN7-209ENST00000477554 CAMKK2Q96RR4 588 aa24.28■■□□□ 1.48
PTPN7-209ENST00000477554 KCNQ2O43526 872 aa24.27■■□□□ 1.48
PTPN7-209ENST00000477554 AMER1Q5JTC6 1135 aaPredicted RBP24.27■■□□□ 1.48
PTPN7-209ENST00000477554 PER1O15534 1290 aaPredicted RBP24.25■■□□□ 1.47
PTPN7-209ENST00000477554 ACSBG1Q96GR2 724 aa24.25■■□□□ 1.47
PTPN7-209ENST00000477554 RREB1Q92766 1687 aa24.23■■□□□ 1.47
PTPN7-209ENST00000477554 DDX54Q8TDD1 881 aaKnown RBP24.22■■□□□ 1.47
PTPN7-209ENST00000477554 KNSTRNQ9Y448 316 aa24.22■■□□□ 1.47
PTPN7-209ENST00000477554 KIF24Q5T7B8 1368 aa24.22■■□□□ 1.47
PTPN7-209ENST00000477554 NUP188Q5SRE5 1749 aa24.22■■□□□ 1.47
PTPN7-209ENST00000477554 BCL9O00512 1426 aa24.22■■□□□ 1.47
PTPN7-209ENST00000477554 PSDA5PKW4 1024 aaPredicted RBP24.21■■□□□ 1.47
PTPN7-209ENST00000477554 CNGB1Q14028 1251 aaPredicted RBP24.21■■□□□ 1.47
PTPN7-209ENST00000477554 MORC1Q86VD1 984 aa24.2■■□□□ 1.46
PTPN7-209ENST00000477554 SMG6Q86US8 1419 aaKnown RBP24.2■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 111.2 ms