RNA–Protein interactions for RNA: ENST00000477538.1

VHL-203, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best)

Gene VHL, Length 958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-203ENST00000477538 FLT4P35916 1363 aa21.84■■□□□ 1.09
VHL-203ENST00000477538 KIF24Q5T7B8 1368 aa21.84■■□□□ 1.09
VHL-203ENST00000477538 AMPHP49418 695 aa21.83■■□□□ 1.09
VHL-203ENST00000477538 FAM208AQ9UK61 1670 aaKnown RBP21.82■■□□□ 1.08
VHL-203ENST00000477538 PRDM11Q9NQV5 511 aa21.82■■□□□ 1.08
VHL-203ENST00000477538 COL3A1P02461 1466 aaPredicted RBP21.8■■□□□ 1.08
VHL-203ENST00000477538 ADAMTS2O95450 1211 aa21.8■■□□□ 1.08
VHL-203ENST00000477538 HOXC9P31274 260 aa21.8■■□□□ 1.08
VHL-203ENST00000477538 CHRNA2Q15822 529 aa21.8■■□□□ 1.08
VHL-203ENST00000477538 NRAPQ86VF7 1730 aa21.8■■□□□ 1.08
VHL-203ENST00000477538 IP6K1Q92551 441 aa21.79■■□□□ 1.08
VHL-203ENST00000477538 BLMP54132 1417 aaPredicted RBP21.79■■□□□ 1.08
VHL-203ENST00000477538 CAMTA1Q9Y6Y1 1673 aa21.79■■□□□ 1.08
VHL-203ENST00000477538 CFAP53Q96M91 514 aa21.78■■□□□ 1.08
VHL-203ENST00000477538 INSRP06213 1382 aa21.77■■□□□ 1.08
VHL-203ENST00000477538 FAM83GA6ND36 823 aa21.77■■□□□ 1.08
VHL-203ENST00000477538 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.77■■□□□ 1.08
VHL-203ENST00000477538 RGPD1P0DJD0 1748 aa21.76■■□□□ 1.07
VHL-203ENST00000477538 CCER2I3L3R5 266 aa21.75■■□□□ 1.07
VHL-203ENST00000477538 CCDC184Q52MB2 194 aa21.75■■□□□ 1.07
VHL-203ENST00000477538 HSP90AB2PQ58FF8 381 aa21.75■■□□□ 1.07
VHL-203ENST00000477538 MEX3CQ5U5Q3 659 aaKnown RBP21.74■■□□□ 1.07
VHL-203ENST00000477538 MRS2Q9HD23 443 aa21.74■■□□□ 1.07
VHL-203ENST00000477538 AXIN2Q9Y2T1 843 aa21.74■■□□□ 1.07
VHL-203ENST00000477538 COL5A2P05997 1499 aaPredicted RBP21.73■■□□□ 1.07
VHL-203ENST00000477538 SLIT2O94813 1529 aa21.72■■□□□ 1.07
VHL-203ENST00000477538 C8orf37Q96NL8 207 aa21.72■■□□□ 1.07
VHL-203ENST00000477538 DIAPH1O60610 1272 aaKnown RBP21.71■■□□□ 1.07
VHL-203ENST00000477538 EIF4A2Q14240 407 aaKnown RBP21.7■■□□□ 1.06
VHL-203ENST00000477538 ILDR1Q86SU0 546 aaPredicted RBP21.7■■□□□ 1.06
VHL-203ENST00000477538 ANKRD24Q8TF21 1146 aa21.7■■□□□ 1.06
VHL-203ENST00000477538 LTV1Q96GA3 475 aaPredicted RBP21.7■■□□□ 1.06
VHL-203ENST00000477538 BTG4Q9NY30 223 aa21.7■■□□□ 1.06
VHL-203ENST00000477538 NGLY1Q96IV0 654 aa21.69■■□□□ 1.06
VHL-203ENST00000477538 ERBB3P21860 1342 aa21.69■■□□□ 1.06
VHL-203ENST00000477538 WNK3Q9BYP7 1800 aa21.69■■□□□ 1.06
VHL-203ENST00000477538 IL13P35225 146 aa21.68■■□□□ 1.06
VHL-203ENST00000477538 STRN4Q9NRL3 753 aa21.66■■□□□ 1.06
VHL-203ENST00000477538 NUDCQ9Y266 331 aa21.66■■□□□ 1.06
VHL-203ENST00000477538 WDR17Q8IZU2 1322 aa21.65■■□□□ 1.06
VHL-203ENST00000477538 CSB-PGBD3P0DP91 1061 aa21.65■■□□□ 1.06
VHL-203ENST00000477538 EVA1CP58658 441 aa21.65■■□□□ 1.06
VHL-203ENST00000477538 BCL9LQ86UU0 1499 aa21.64■■□□□ 1.06
VHL-203ENST00000477538 U2SURPO15042 1029 aaKnown RBP21.64■■□□□ 1.05
VHL-203ENST00000477538 FNBP4Q8N3X1 1017 aaPredicted RBP21.64■■□□□ 1.05
VHL-203ENST00000477538 AFF2P51816 1311 aa21.63■■□□□ 1.05
VHL-203ENST00000477538 WDR43Q15061 677 aaKnown RBP eCLIP21.63■■□□□ 1.05
VHL-203ENST00000477538 PNISRQ8TF01 805 aaKnown RBP21.62■■□□□ 1.05
VHL-203ENST00000477538 CRB1P82279 1406 aa21.62■■□□□ 1.05
VHL-203ENST00000477538 IGSF1Q8N6C5 1336 aa21.61■■□□□ 1.05
VHL-203ENST00000477538 PARP4Q9UKK3 1724 aaKnown RBP21.61■■□□□ 1.05
VHL-203ENST00000477538 LARP1Q6PKG0 1096 aaKnown RBP21.61■■□□□ 1.05
VHL-203ENST00000477538 UNC5CLQ8IV45 518 aa21.61■■□□□ 1.05
VHL-203ENST00000477538 EYA1Q99502 592 aa21.61■■□□□ 1.05
VHL-203ENST00000477538 NLRP2Q9NX02 1062 aa21.61■■□□□ 1.05
VHL-203ENST00000477538 USP21Q9UK80 565 aa21.61■■□□□ 1.05
VHL-203ENST00000477538 NCAPD2Q15021 1401 aa21.61■■□□□ 1.05
VHL-203ENST00000477538 U2AF1L5P0DN76 240 aaPredicted RBP21.6■■□□□ 1.05
VHL-203ENST00000477538 U2AF1Q01081 240 aaKnown RBP eCLIP21.6■■□□□ 1.05
VHL-203ENST00000477538 NBPF6Q5VWK0 638 aa21.6■■□□□ 1.05
VHL-203ENST00000477538 TOM1L2Q6ZVM7 507 aa21.6■■□□□ 1.05
VHL-203ENST00000477538 NBPF4Q96M43 638 aa21.6■■□□□ 1.05
VHL-203ENST00000477538 USHBP1Q8N6Y0 703 aa21.58■■□□□ 1.05
VHL-203ENST00000477538 VIRMAQ69YN4 1812 aaKnown RBP21.57■■□□□ 1.04
VHL-203ENST00000477538 DLG5Q8TDM6 1919 aa21.57■■□□□ 1.04
VHL-203ENST00000477538 FAM9BQ8IZU0 186 aa21.57■■□□□ 1.04
VHL-203ENST00000477538 CARD10Q9BWT7 1032 aa21.57■■□□□ 1.04
VHL-203ENST00000477538 KDRP35968 1356 aa21.57■■□□□ 1.04
VHL-203ENST00000477538 HMOX1P09601 288 aa21.56■■□□□ 1.04
VHL-203ENST00000477538 SULT6B1Q6IMI4 303 aa21.56■■□□□ 1.04
VHL-203ENST00000477538 ADAMTS8Q9UP79 889 aa21.56■■□□□ 1.04
VHL-203ENST00000477538 AEBP1Q8IUX7 1158 aa21.55■■□□□ 1.04
VHL-203ENST00000477538 PKD1L3Q7Z443 1732 aa21.55■■□□□ 1.04
VHL-203ENST00000477538 ATRNO75882 1429 aa21.55■■□□□ 1.04
VHL-203ENST00000477538 GLI3P10071 1580 aa21.54■■□□□ 1.04
VHL-203ENST00000477538 VPS72Q15906 364 aa21.54■■□□□ 1.04
VHL-203ENST00000477538 CCDC9Q9Y3X0 531 aaKnown RBP21.54■■□□□ 1.04
VHL-203ENST00000477538 SPATA31A5Q5VU36 1347 aa21.54■■□□□ 1.04
VHL-203ENST00000477538 SPATA31A7Q8IWB4 1347 aa21.54■■□□□ 1.04
VHL-203ENST00000477538 USP35Q9P2H5 1018 aa21.53■■□□□ 1.04
VHL-203ENST00000477538 SPATA31A1Q5TZJ5 1347 aa21.53■■□□□ 1.04
VHL-203ENST00000477538 SHANK3Q9BYB0 1731 aa21.52■■□□□ 1.04
VHL-203ENST00000477538 FCHSD2O94868 740 aa21.52■■□□□ 1.04
VHL-203ENST00000477538 RSPH6AQ9H0K4 717 aa21.52■■□□□ 1.04
VHL-203ENST00000477538 TRPC5Q9UL62 973 aaPredicted RBP21.52■■□□□ 1.04
VHL-203ENST00000477538 ZNF772Q68DY9 489 aaPredicted RBP21.51■■□□□ 1.03
VHL-203ENST00000477538 MEGF6O75095 1541 aa21.5■■□□□ 1.03
VHL-203ENST00000477538 PRKAR2BP31323 418 aa21.5■■□□□ 1.03
VHL-203ENST00000477538 TCP11L2Q8N4U5 519 aa21.5■■□□□ 1.03
VHL-203ENST00000477538 PNNQ9H307 717 aaKnown RBP21.5■■□□□ 1.03
VHL-203ENST00000477538 RAPGEF4Q8WZA2 1011 aa21.49■■□□□ 1.03
VHL-203ENST00000477538 THRAP3Q9Y2W1 955 aaKnown RBP21.49■■□□□ 1.03
VHL-203ENST00000477538 LRRC37A3O60309 1634 aa21.48■■□□□ 1.03
VHL-203ENST00000477538 THSD7AQ9UPZ6 1657 aa21.48■■□□□ 1.03
VHL-203ENST00000477538 CCDC146Q8IYE0 955 aa21.48■■□□□ 1.03
VHL-203ENST00000477538 QTRT2Q9H974 415 aaKnown RBP21.48■■□□□ 1.03
VHL-203ENST00000477538 DISP2A7MBM2 1401 aa21.47■■□□□ 1.03
VHL-203ENST00000477538 PLEKHF1Q96S99 279 aa21.47■■□□□ 1.03
VHL-203ENST00000477538 PHF23Q9BUL5 403 aaPredicted RBP21.47■■□□□ 1.03
VHL-203ENST00000477538 OVOS2A0A0G2JMS6 1433 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms