RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-212ENST00000477520 CCDC116Q8IYX3 515 aa7.52□□□□□ -1.21
PTCD3-212ENST00000477520 EMILIN1Q9Y6C2 1016 aa7.52□□□□□ -1.21
PTCD3-212ENST00000477520 ZMYND10O75800 440 aa7.51□□□□□ -1.21
PTCD3-212ENST00000477520 IRS1P35568 1242 aa7.51□□□□□ -1.21
PTCD3-212ENST00000477520 QPCTQ16769 361 aa7.51□□□□□ -1.21
PTCD3-212ENST00000477520 GPAT2Q6NUI2 795 aa7.51□□□□□ -1.21
PTCD3-212ENST00000477520 PARP9Q8IXQ6 854 aa7.51□□□□□ -1.21
PTCD3-212ENST00000477520 TSC1Q92574 1164 aa7.51□□□□□ -1.21
PTCD3-212ENST00000477520 MAGEB6P1A0A0J9YX57 407 aa7.5□□□□□ -1.21
PTCD3-212ENST00000477520 SLC35F4A4IF30 521 aa7.5□□□□□ -1.21
PTCD3-212ENST00000477520 SPINT1O43278 529 aa7.5□□□□□ -1.21
PTCD3-212ENST00000477520 SLURP2P0DP57 97 aa7.5□□□□□ -1.21
PTCD3-212ENST00000477520 DIXDC1Q155Q3 683 aa7.5□□□□□ -1.21
PTCD3-212ENST00000477520 VWA5B2Q8N398 1253 aa7.5□□□□□ -1.21
PTCD3-212ENST00000477520 PPP1R26Q5T8A7 1209 aaPredicted RBP7.49□□□□□ -1.21
PTCD3-212ENST00000477520 Q6ZVU0 165 aa7.49□□□□□ -1.21
PTCD3-212ENST00000477520 CARD14Q9BXL6 1004 aa7.49□□□□□ -1.21
PTCD3-212ENST00000477520 LIMD1Q9UGP4 676 aa7.49□□□□□ -1.21
PTCD3-212ENST00000477520 DNMT3AQ9Y6K1 912 aaPredicted RBP7.49□□□□□ -1.21
PTCD3-212ENST00000477520 ITGA6P23229 1130 aa7.48□□□□□ -1.21
PTCD3-212ENST00000477520 ARMC2Q8NEN0 867 aa7.48□□□□□ -1.21
PTCD3-212ENST00000477520 CDC14CA4D256 554 aa7.47□□□□□ -1.21
PTCD3-212ENST00000477520 NBPF14Q5TI25 921 aa7.47□□□□□ -1.21
PTCD3-212ENST00000477520 CTSOP43234 321 aaPredicted RBP7.46□□□□□ -1.22
PTCD3-212ENST00000477520 ERFEQ4G0M1 354 aa7.46□□□□□ -1.22
PTCD3-212ENST00000477520 AGBL1Q96MI9 1066 aa7.46□□□□□ -1.22
PTCD3-212ENST00000477520 SENP3-EIF4A1A0A087X0R7 540 aa7.45□□□□□ -1.22
PTCD3-212ENST00000477520 NUTM2BA6NNL0 878 aaPredicted RBP7.45□□□□□ -1.22
PTCD3-212ENST00000477520 NUTM2EB1AL46 878 aaPredicted RBP7.45□□□□□ -1.22
PTCD3-212ENST00000477520 LILRB3O75022 631 aa7.45□□□□□ -1.22
PTCD3-212ENST00000477520 RTL5Q5HYW3 569 aaPredicted RBP7.45□□□□□ -1.22
PTCD3-212ENST00000477520 NUTM2DQ5VT03 806 aaPredicted RBP7.45□□□□□ -1.22
PTCD3-212ENST00000477520 MYSM1Q5VVJ2 828 aa7.45□□□□□ -1.22
PTCD3-212ENST00000477520 NUTM2AQ8IVF1 878 aaPredicted RBP7.45□□□□□ -1.22
PTCD3-212ENST00000477520 ZC3H15Q8WU90 426 aaKnown RBP7.45□□□□□ -1.22
PTCD3-212ENST00000477520 IGHA1P01876 353 aa7.44□□□□□ -1.22
PTCD3-212ENST00000477520 ZEB1P37275 1124 aaPredicted RBP7.44□□□□□ -1.22
PTCD3-212ENST00000477520 MARSP56192 900 aaKnown RBP7.44□□□□□ -1.22
PTCD3-212ENST00000477520 LYPD4Q6UWN0 246 aa7.44□□□□□ -1.22
PTCD3-212ENST00000477520 SV2AQ7L0J3 742 aa7.44□□□□□ -1.22
PTCD3-212ENST00000477520 INSM2Q96T92 566 aaPredicted RBP7.44□□□□□ -1.22
PTCD3-212ENST00000477520 PGPEP1Q9NXJ5 209 aa7.44□□□□□ -1.22
PTCD3-212ENST00000477520 SCRIBQ14160 1630 aa7.43□□□□□ -1.22
PTCD3-212ENST00000477520 TRIM66O15016 1216 aa7.43□□□□□ -1.22
PTCD3-212ENST00000477520 ADAMTS2O95450 1211 aa7.43□□□□□ -1.22
PTCD3-212ENST00000477520 KANK3Q6NY19 840 aa7.43□□□□□ -1.22
PTCD3-212ENST00000477520 RELBQ01201 579 aa7.42□□□□□ -1.22
PTCD3-212ENST00000477520 UNC13AQ9UPW8 1703 aa7.41□□□□□ -1.22
PTCD3-212ENST00000477520 TUSC1Q2TAM9 212 aa7.41□□□□□ -1.22
PTCD3-212ENST00000477520 RNF217Q8TC41 542 aa7.41□□□□□ -1.22
PTCD3-212ENST00000477520 KCTD15Q96SI1 283 aaPredicted RBP7.41□□□□□ -1.22
PTCD3-212ENST00000477520 CUEDC1Q9NWM3 386 aaPredicted RBP7.41□□□□□ -1.22
PTCD3-212ENST00000477520 FOXK2Q01167 660 aa7.4□□□□□ -1.22
PTCD3-212ENST00000477520 GAS6Q14393 721 aa7.4□□□□□ -1.22
PTCD3-212ENST00000477520 INTS6LQ5JSJ4 861 aaKnown RBP7.4□□□□□ -1.22
PTCD3-212ENST00000477520 XP32Q5T750 250 aa7.4□□□□□ -1.22
PTCD3-212ENST00000477520 VSIG10Q8N0Z9 540 aa7.4□□□□□ -1.22
PTCD3-212ENST00000477520 HELBQ8NG08 1087 aaPredicted RBP7.4□□□□□ -1.22
PTCD3-212ENST00000477520 GPKOWQ92917 476 aaPredicted RBP eCLIP7.4□□□□□ -1.222e-6■■■□□ 15.9
PTCD3-212ENST00000477520 SCARF2Q96GP6 870 aaPredicted RBP7.4□□□□□ -1.22
PTCD3-212ENST00000477520 ZNF395Q9H8N7 513 aaPredicted RBP7.4□□□□□ -1.22
PTCD3-212ENST00000477520 CELA2BP08218 269 aaPredicted RBP7.39□□□□□ -1.23
PTCD3-212ENST00000477520 ARHGAP9Q9BRR9 750 aa7.39□□□□□ -1.23
PTCD3-212ENST00000477520 POLMQ9NP87 494 aaPredicted RBP7.39□□□□□ -1.23
PTCD3-212ENST00000477520 ITGB2P05107 769 aa7.38□□□□□ -1.23
PTCD3-212ENST00000477520 CTDSPL2Q05D32 466 aa7.38□□□□□ -1.23
PTCD3-212ENST00000477520 PDXDC2PQ6P474 469 aa7.38□□□□□ -1.23
PTCD3-212ENST00000477520 SLC10A4Q96EP9 437 aa7.38□□□□□ -1.23
PTCD3-212ENST00000477520 OCSTAMPQ9BR26 566 aa7.38□□□□□ -1.23
PTCD3-212ENST00000477520 SRSF11Q05519 484 aaKnown RBP7.37□□□□□ -1.23
PTCD3-212ENST00000477520 FOXD4L5Q5VV16 416 aaPredicted RBP7.37□□□□□ -1.23
PTCD3-212ENST00000477520 TMPRSS4Q9NRS4 437 aa7.37□□□□□ -1.23
PTCD3-212ENST00000477520 SHROOM4Q9ULL8 1493 aa7.36□□□□□ -1.23
PTCD3-212ENST00000477520 DHX9Q08211 1270 aaKnown RBP7.36□□□□□ -1.23
PTCD3-212ENST00000477520 PLA2G4EQ3MJ16 856 aa7.36□□□□□ -1.23
PTCD3-212ENST00000477520 KDF1Q8NAX2 398 aaPredicted RBP7.36□□□□□ -1.23
PTCD3-212ENST00000477520 CNTNAP5Q8WYK1 1306 aa7.35□□□□□ -1.23
PTCD3-212ENST00000477520 ADAM23O75077 832 aa7.35□□□□□ -1.23
PTCD3-212ENST00000477520 ADD1P35611 737 aaKnown RBP7.35□□□□□ -1.23
PTCD3-212ENST00000477520 MAP3K10Q02779 954 aa7.35□□□□□ -1.23
PTCD3-212ENST00000477520 LRRN4Q8WUT4 740 aa7.35□□□□□ -1.23
PTCD3-212ENST00000477520 DCAF5Q96JK2 942 aa7.35□□□□□ -1.23
PTCD3-212ENST00000477520 FKBPLQ9UIM3 349 aa7.35□□□□□ -1.23
PTCD3-212ENST00000477520 BICRAQ9NZM4 1560 aa7.34□□□□□ -1.23
PTCD3-212ENST00000477520 ZBTB33Q86T24 672 aa7.34□□□□□ -1.23
PTCD3-212ENST00000477520 ZNF784Q8NCA9 323 aaPredicted RBP7.34□□□□□ -1.23
PTCD3-212ENST00000477520 SPOCK3Q9BQ16 436 aa7.34□□□□□ -1.23
PTCD3-212ENST00000477520 CDV3Q9UKY7 258 aaKnown RBP7.34□□□□□ -1.23
PTCD3-212ENST00000477520 MSTNO14793 375 aa7.33□□□□□ -1.24
PTCD3-212ENST00000477520 LILRA1O75019 489 aa7.33□□□□□ -1.24
PTCD3-212ENST00000477520 ADH1AP07327 375 aa7.33□□□□□ -1.24
PTCD3-212ENST00000477520 CLK2P49760 499 aaKnown RBP7.33□□□□□ -1.24
PTCD3-212ENST00000477520 AK7Q96M32 723 aa7.33□□□□□ -1.24
PTCD3-212ENST00000477520 FBXO31Q5XUX0 539 aaPredicted RBP7.32□□□□□ -1.24
PTCD3-212ENST00000477520 POLR3EQ9NVU0 708 aa7.32□□□□□ -1.24
PTCD3-212ENST00000477520 GPR25O00155 361 aa7.31□□□□□ -1.24
PTCD3-212ENST00000477520 PROCP04070 461 aa7.31□□□□□ -1.24
PTCD3-212ENST00000477520 PTGIRP43119 386 aa7.31□□□□□ -1.24
PTCD3-212ENST00000477520 RAB15P59190 212 aa7.31□□□□□ -1.24
PTCD3-212ENST00000477520 PDE4DQ08499 809 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 106 ms