RNA–Protein interactions for RNA: ENST00000477446.5

EPHB4-204, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 1,551 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-204ENST00000477446 AXIN2Q9Y2T1 843 aa22.76■■□□□ 1.23
EPHB4-204ENST00000477446 AMPHP49418 695 aa22.76■■□□□ 1.23
EPHB4-204ENST00000477446 RALBP1Q15311 655 aa22.76■■□□□ 1.23
EPHB4-204ENST00000477446 CAMTA1Q9Y6Y1 1673 aa22.75■■□□□ 1.23
EPHB4-204ENST00000477446 SLIT2O94813 1529 aa22.75■■□□□ 1.23
EPHB4-204ENST00000477446 PPM1GO15355 546 aaPredicted RBP22.75■■□□□ 1.23
EPHB4-204ENST00000477446 PRKRIP1Q9H875 184 aaPredicted RBP22.75■■□□□ 1.23
EPHB4-204ENST00000477446 BTG4Q9NY30 223 aa22.75■■□□□ 1.23
EPHB4-204ENST00000477446 ABCC6O95255 1503 aa22.74■■□□□ 1.23
EPHB4-204ENST00000477446 FNBP4Q8N3X1 1017 aaPredicted RBP22.74■■□□□ 1.23
EPHB4-204ENST00000477446 IP6K1Q92551 441 aa22.74■■□□□ 1.23
EPHB4-204ENST00000477446 NWD2Q9ULI1 1742 aa22.74■■□□□ 1.23
EPHB4-204ENST00000477446 PPP2R1AP30153 589 aa22.73■■□□□ 1.23
EPHB4-204ENST00000477446 HOXC9P31274 260 aa22.73■■□□□ 1.23
EPHB4-204ENST00000477446 RTL1A6NKG5 1358 aa22.73■■□□□ 1.23
EPHB4-204ENST00000477446 KIF24Q5T7B8 1368 aa22.73■■□□□ 1.23
EPHB4-204ENST00000477446 SMG6Q86US8 1419 aaKnown RBP22.73■■□□□ 1.23
EPHB4-204ENST00000477446 MTHFSP49914 203 aa22.72■■□□□ 1.23
EPHB4-204ENST00000477446 AFF2P51816 1311 aa22.72■■□□□ 1.23
EPHB4-204ENST00000477446 FLT4P35916 1363 aa22.71■■□□□ 1.23
EPHB4-204ENST00000477446 BCL9LQ86UU0 1499 aa22.71■■□□□ 1.23
EPHB4-204ENST00000477446 NRAPQ86VF7 1730 aa22.71■■□□□ 1.23
EPHB4-204ENST00000477446 BLMP54132 1417 aaPredicted RBP22.7■■□□□ 1.22
EPHB4-204ENST00000477446 HSP90AB2PQ58FF8 381 aa22.7■■□□□ 1.22
EPHB4-204ENST00000477446 USP21Q9UK80 565 aa22.7■■□□□ 1.22
EPHB4-204ENST00000477446 COL5A2P05997 1499 aaPredicted RBP22.69■■□□□ 1.22
EPHB4-204ENST00000477446 UNC5CLQ8IV45 518 aa22.68■■□□□ 1.22
EPHB4-204ENST00000477446 CDK12Q9NYV4 1490 aaPredicted RBP22.68■■□□□ 1.22
EPHB4-204ENST00000477446 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.68■■□□□ 1.22
EPHB4-204ENST00000477446 INSRP06213 1382 aa22.68■■□□□ 1.22
EPHB4-204ENST00000477446 STRN4Q9NRL3 753 aa22.67■■□□□ 1.22
EPHB4-204ENST00000477446 MYBBP1AQ9BQG0 1328 aaKnown RBP22.67■■□□□ 1.22
EPHB4-204ENST00000477446 EVA1CP58658 441 aa22.67■■□□□ 1.22
EPHB4-204ENST00000477446 ANKRD24Q8TF21 1146 aa22.66■■□□□ 1.22
EPHB4-204ENST00000477446 ERBB3P21860 1342 aa22.65■■□□□ 1.22
EPHB4-204ENST00000477446 ILDR2Q71H61 639 aa22.65■■□□□ 1.22
EPHB4-204ENST00000477446 LTV1Q96GA3 475 aaPredicted RBP22.65■■□□□ 1.22
EPHB4-204ENST00000477446 PHF23Q9BUL5 403 aaPredicted RBP22.64■■□□□ 1.22
EPHB4-204ENST00000477446 RGS17Q9UGC6 210 aaPredicted RBP22.63■■□□□ 1.21
EPHB4-204ENST00000477446 WDR17Q8IZU2 1322 aa22.63■■□□□ 1.21
EPHB4-204ENST00000477446 CSB-PGBD3P0DP91 1061 aa22.63■■□□□ 1.21
EPHB4-204ENST00000477446 ZNF772Q68DY9 489 aaPredicted RBP22.63■■□□□ 1.21
EPHB4-204ENST00000477446 LARP1Q6PKG0 1096 aaKnown RBP22.63■■□□□ 1.21
EPHB4-204ENST00000477446 RGPD2P0DJD1 1756 aa22.61■■□□□ 1.21
EPHB4-204ENST00000477446 EIF4A2Q14240 407 aaKnown RBP22.61■■□□□ 1.21
EPHB4-204ENST00000477446 VPS72Q15906 364 aa22.6■■□□□ 1.21
EPHB4-204ENST00000477446 QTRT2Q9H974 415 aaKnown RBP22.6■■□□□ 1.21
EPHB4-204ENST00000477446 TRPC5Q9UL62 973 aaPredicted RBP22.6■■□□□ 1.21
EPHB4-204ENST00000477446 ATRNO75882 1429 aa22.6■■□□□ 1.21
EPHB4-204ENST00000477446 FAM208AQ9UK61 1670 aaKnown RBP22.6■■□□□ 1.21
EPHB4-204ENST00000477446 COL3A1P02461 1466 aaPredicted RBP22.6■■□□□ 1.21
EPHB4-204ENST00000477446 TOM1L2Q6ZVM7 507 aa22.59■■□□□ 1.21
EPHB4-204ENST00000477446 CFAP53Q96M91 514 aa22.59■■□□□ 1.21
EPHB4-204ENST00000477446 CRB1P82279 1406 aa22.59■■□□□ 1.21
EPHB4-204ENST00000477446 IL13P35225 146 aa22.58■■□□□ 1.2
EPHB4-204ENST00000477446 NLRP2Q9NX02 1062 aa22.58■■□□□ 1.2
EPHB4-204ENST00000477446 CCDC9Q9Y3X0 531 aaKnown RBP22.58■■□□□ 1.2
EPHB4-204ENST00000477446 SPATA31A5Q5VU36 1347 aa22.57■■□□□ 1.2
EPHB4-204ENST00000477446 SPATA31A7Q8IWB4 1347 aa22.57■■□□□ 1.2
EPHB4-204ENST00000477446 SOCS7O14512 581 aa22.57■■□□□ 1.2
EPHB4-204ENST00000477446 DIAPH1O60610 1272 aaKnown RBP22.57■■□□□ 1.2
EPHB4-204ENST00000477446 NBPF6Q5VWK0 638 aa22.56■■□□□ 1.2
EPHB4-204ENST00000477446 NBPF4Q96M43 638 aa22.56■■□□□ 1.2
EPHB4-204ENST00000477446 USP35Q9P2H5 1018 aa22.56■■□□□ 1.2
EPHB4-204ENST00000477446 SPATA31A1Q5TZJ5 1347 aa22.56■■□□□ 1.2
EPHB4-204ENST00000477446 GJD4Q96KN9 370 aaPredicted RBP22.55■■□□□ 1.2
EPHB4-204ENST00000477446 CARD10Q9BWT7 1032 aa22.55■■□□□ 1.2
EPHB4-204ENST00000477446 POTEAQ6S8J7 498 aa22.55■■□□□ 1.2
EPHB4-204ENST00000477446 EYA1Q99502 592 aa22.55■■□□□ 1.2
EPHB4-204ENST00000477446 GLI3P10071 1580 aa22.54■■□□□ 1.2
EPHB4-204ENST00000477446 RGPD1P0DJD0 1748 aa22.53■■□□□ 1.2
EPHB4-204ENST00000477446 CCDC184Q52MB2 194 aa22.52■■□□□ 1.2
EPHB4-204ENST00000477446 USHBP1Q8N6Y0 703 aa22.52■■□□□ 1.2
EPHB4-204ENST00000477446 TCP11L2Q8N4U5 519 aa22.51■■□□□ 1.19
EPHB4-204ENST00000477446 IGSF1Q8N6C5 1336 aa22.5■■□□□ 1.19
EPHB4-204ENST00000477446 RBM6P78332 1123 aaKnown RBP22.5■■□□□ 1.19
EPHB4-204ENST00000477446 THRAP3Q9Y2W1 955 aaKnown RBP22.5■■□□□ 1.19
EPHB4-204ENST00000477446 NCAPD2Q15021 1401 aa22.49■■□□□ 1.19
EPHB4-204ENST00000477446 U2SURPO15042 1029 aaKnown RBP22.49■■□□□ 1.19
EPHB4-204ENST00000477446 NUDCQ9Y266 331 aa22.49■■□□□ 1.19
EPHB4-204ENST00000477446 WNK3Q9BYP7 1800 aa22.48■■□□□ 1.19
EPHB4-204ENST00000477446 RXRBP28702 533 aa22.47■■□□□ 1.19
EPHB4-204ENST00000477446 FAM98CQ17RN3 349 aaKnown RBP22.47■■□□□ 1.19
EPHB4-204ENST00000477446 BARGINQ6ZT62 677 aa22.47■■□□□ 1.19
EPHB4-204ENST00000477446 SULT6B1Q6IMI4 303 aa22.46■■□□□ 1.19
EPHB4-204ENST00000477446 AEBP1Q8IUX7 1158 aa22.46■■□□□ 1.19
EPHB4-204ENST00000477446 MRS2Q9HD23 443 aa22.46■■□□□ 1.19
EPHB4-204ENST00000477446 ONECUT3O60422 494 aaPredicted RBP22.44■■□□□ 1.18
EPHB4-204ENST00000477446 HMOX1P09601 288 aa22.44■■□□□ 1.18
EPHB4-204ENST00000477446 U2AF1L5P0DN76 240 aaPredicted RBP22.44■■□□□ 1.18
EPHB4-204ENST00000477446 U2AF1Q01081 240 aaKnown RBP eCLIP22.44■■□□□ 1.18
EPHB4-204ENST00000477446 DISP2A7MBM2 1401 aa22.44■■□□□ 1.18
EPHB4-204ENST00000477446 IL2RBP14784 551 aa22.43■■□□□ 1.18
EPHB4-204ENST00000477446 KDRP35968 1356 aa22.43■■□□□ 1.18
EPHB4-204ENST00000477446 THSD7AQ9UPZ6 1657 aa22.42■■□□□ 1.18
EPHB4-204ENST00000477446 MEGF6O75095 1541 aa22.42■■□□□ 1.18
EPHB4-204ENST00000477446 RAPGEF4Q8WZA2 1011 aa22.42■■□□□ 1.18
EPHB4-204ENST00000477446 CDCA7Q9BWT1 371 aaPredicted RBP22.42■■□□□ 1.18
EPHB4-204ENST00000477446 PARP4Q9UKK3 1724 aaKnown RBP22.41■■□□□ 1.18
EPHB4-204ENST00000477446 A0A0G2JS52 829 aa22.39■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms