RNA–Protein interactions for RNA: ENST00000477299.5

COPS3-207, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-207ENST00000477299 EMILIN1Q9Y6C2 1016 aa21.69■■□□□ 1.06
COPS3-207ENST00000477299 NSD2O96028 1365 aa21.68■■□□□ 1.06
COPS3-207ENST00000477299 POTEAQ6S8J7 498 aa21.67■■□□□ 1.06
COPS3-207ENST00000477299 PHF23Q9BUL5 403 aaPredicted RBP21.67■■□□□ 1.06
COPS3-207ENST00000477299 AATKQ6ZMQ8 1374 aa21.66■■□□□ 1.06
COPS3-207ENST00000477299 POLKQ9UBT6 870 aa21.66■■□□□ 1.06
COPS3-207ENST00000477299 RGPD2P0DJD1 1756 aa21.66■■□□□ 1.06
COPS3-207ENST00000477299 NPC1L1Q9UHC9 1359 aa21.65■■□□□ 1.06
COPS3-207ENST00000477299 STRN4Q9NRL3 753 aa21.65■■□□□ 1.06
COPS3-207ENST00000477299 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.64■■□□□ 1.06
COPS3-207ENST00000477299 UNC5CLQ8IV45 518 aa21.64■■□□□ 1.05
COPS3-207ENST00000477299 PPM1GO15355 546 aaPredicted RBP21.63■■□□□ 1.05
COPS3-207ENST00000477299 HOXC9P31274 260 aa21.63■■□□□ 1.05
COPS3-207ENST00000477299 AMPHP49418 695 aa21.63■■□□□ 1.05
COPS3-207ENST00000477299 IP6K1Q92551 441 aa21.63■■□□□ 1.05
COPS3-207ENST00000477299 QTRT2Q9H974 415 aaKnown RBP21.63■■□□□ 1.05
COPS3-207ENST00000477299 HSP90AB2PQ58FF8 381 aa21.62■■□□□ 1.05
COPS3-207ENST00000477299 COL5A2P05997 1499 aaPredicted RBP21.61■■□□□ 1.05
COPS3-207ENST00000477299 LARP1Q6PKG0 1096 aaKnown RBP21.61■■□□□ 1.05
COPS3-207ENST00000477299 LTV1Q96GA3 475 aaPredicted RBP21.61■■□□□ 1.05
COPS3-207ENST00000477299 ATRNO75882 1429 aa21.59■■□□□ 1.05
COPS3-207ENST00000477299 EVA1CP58658 441 aa21.59■■□□□ 1.05
COPS3-207ENST00000477299 ZNF772Q68DY9 489 aaPredicted RBP21.59■■□□□ 1.05
COPS3-207ENST00000477299 GLI3P10071 1580 aa21.57■■□□□ 1.04
COPS3-207ENST00000477299 MTHFSP49914 203 aa21.57■■□□□ 1.04
COPS3-207ENST00000477299 VPS72Q15906 364 aa21.57■■□□□ 1.04
COPS3-207ENST00000477299 ANKRD24Q8TF21 1146 aa21.57■■□□□ 1.04
COPS3-207ENST00000477299 PARD3Q8TEW0 1356 aa21.57■■□□□ 1.04
COPS3-207ENST00000477299 PPP2R1AP30153 589 aa21.56■■□□□ 1.04
COPS3-207ENST00000477299 TRPC5Q9UL62 973 aaPredicted RBP21.56■■□□□ 1.04
COPS3-207ENST00000477299 CCDC9Q9Y3X0 531 aaKnown RBP21.56■■□□□ 1.04
COPS3-207ENST00000477299 ABCC6O95255 1503 aa21.55■■□□□ 1.04
COPS3-207ENST00000477299 USP35Q9P2H5 1018 aa21.55■■□□□ 1.04
COPS3-207ENST00000477299 FLT4P35916 1363 aa21.55■■□□□ 1.04
COPS3-207ENST00000477299 GJD4Q96KN9 370 aaPredicted RBP21.54■■□□□ 1.04
COPS3-207ENST00000477299 SMG6Q86US8 1419 aaKnown RBP21.54■■□□□ 1.04
COPS3-207ENST00000477299 ERBB3P21860 1342 aa21.54■■□□□ 1.04
COPS3-207ENST00000477299 SPATA31A5Q5VU36 1347 aa21.54■■□□□ 1.04
COPS3-207ENST00000477299 SPATA31A7Q8IWB4 1347 aa21.54■■□□□ 1.04
COPS3-207ENST00000477299 WDR17Q8IZU2 1322 aa21.54■■□□□ 1.04
COPS3-207ENST00000477299 RTL1A6NKG5 1358 aa21.53■■□□□ 1.04
COPS3-207ENST00000477299 INSRP06213 1382 aa21.53■■□□□ 1.04
COPS3-207ENST00000477299 CSB-PGBD3P0DP91 1061 aa21.53■■□□□ 1.04
COPS3-207ENST00000477299 BLMP54132 1417 aaPredicted RBP21.53■■□□□ 1.04
COPS3-207ENST00000477299 TOM1L2Q6ZVM7 507 aa21.52■■□□□ 1.04
COPS3-207ENST00000477299 SPATA31A1Q5TZJ5 1347 aa21.52■■□□□ 1.03
COPS3-207ENST00000477299 PRKRIP1Q9H875 184 aaPredicted RBP21.51■■□□□ 1.03
COPS3-207ENST00000477299 CRB1P82279 1406 aa21.5■■□□□ 1.03
COPS3-207ENST00000477299 EIF4A2Q14240 407 aaKnown RBP21.5■■□□□ 1.03
COPS3-207ENST00000477299 NBPF6Q5VWK0 638 aa21.5■■□□□ 1.03
COPS3-207ENST00000477299 USHBP1Q8N6Y0 703 aa21.5■■□□□ 1.03
COPS3-207ENST00000477299 NBPF4Q96M43 638 aa21.5■■□□□ 1.03
COPS3-207ENST00000477299 NLRP2Q9NX02 1062 aa21.5■■□□□ 1.03
COPS3-207ENST00000477299 KIF24Q5T7B8 1368 aa21.49■■□□□ 1.03
COPS3-207ENST00000477299 RXRBP28702 533 aa21.49■■□□□ 1.03
COPS3-207ENST00000477299 RBM6P78332 1123 aaKnown RBP21.49■■□□□ 1.03
COPS3-207ENST00000477299 CDK12Q9NYV4 1490 aaPredicted RBP21.49■■□□□ 1.03
COPS3-207ENST00000477299 BRWD3Q6RI45 1802 aa21.48■■□□□ 1.03
COPS3-207ENST00000477299 RALBP1Q15311 655 aa21.48■■□□□ 1.03
COPS3-207ENST00000477299 FAM98CQ17RN3 349 aaKnown RBP21.48■■□□□ 1.03
COPS3-207ENST00000477299 FAM208AQ9UK61 1670 aaKnown RBP21.47■■□□□ 1.03
COPS3-207ENST00000477299 COL3A1P02461 1466 aaPredicted RBP21.46■■□□□ 1.03
COPS3-207ENST00000477299 WNK3Q9BYP7 1800 aa21.46■■□□□ 1.03
COPS3-207ENST00000477299 CARD10Q9BWT7 1032 aa21.46■■□□□ 1.03
COPS3-207ENST00000477299 EYA1Q99502 592 aa21.45■■□□□ 1.02
COPS3-207ENST00000477299 IL13P35225 146 aa21.44■■□□□ 1.02
COPS3-207ENST00000477299 TCP11L2Q8N4U5 519 aa21.44■■□□□ 1.02
COPS3-207ENST00000477299 RGPD1P0DJD0 1748 aa21.43■■□□□ 1.02
COPS3-207ENST00000477299 RGS12O14924 1447 aa21.42■■□□□ 1.02
COPS3-207ENST00000477299 ONECUT3O60422 494 aaPredicted RBP21.42■■□□□ 1.02
COPS3-207ENST00000477299 CCDC184Q52MB2 194 aa21.42■■□□□ 1.02
COPS3-207ENST00000477299 THSD7AQ9UPZ6 1657 aa21.41■■□□□ 1.02
COPS3-207ENST00000477299 MYBBP1AQ9BQG0 1328 aaKnown RBP21.41■■□□□ 1.02
COPS3-207ENST00000477299 SEPT12Q8IYM1 358 aa21.41■■□□□ 1.02
COPS3-207ENST00000477299 AEBP1Q8IUX7 1158 aa21.4■■□□□ 1.02
COPS3-207ENST00000477299 DIAPH1O60610 1272 aaKnown RBP21.39■■□□□ 1.01
COPS3-207ENST00000477299 BARGINQ6ZT62 677 aa21.39■■□□□ 1.01
COPS3-207ENST00000477299 DISP2A7MBM2 1401 aa21.38■■□□□ 1.01
COPS3-207ENST00000477299 A0A0G2JS52 829 aa21.38■■□□□ 1.01
COPS3-207ENST00000477299 ANP32CO43423 234 aa21.38■■□□□ 1.01
COPS3-207ENST00000477299 MYT1Q01538 1121 aa21.38■■□□□ 1.01
COPS3-207ENST00000477299 THRAP3Q9Y2W1 955 aaKnown RBP21.37■■□□□ 1.01
COPS3-207ENST00000477299 MEGF6O75095 1541 aa21.37■■□□□ 1.01
COPS3-207ENST00000477299 PARP4Q9UKK3 1724 aaKnown RBP21.37■■□□□ 1.01
COPS3-207ENST00000477299 IGSF1Q8N6C5 1336 aa21.36■■□□□ 1.01
COPS3-207ENST00000477299 FAM182BQ5T319 152 aa21.36■■□□□ 1.01
COPS3-207ENST00000477299 NCAPD2Q15021 1401 aa21.36■■□□□ 1.01
COPS3-207ENST00000477299 LRRC37A3O60309 1634 aa21.36■■□□□ 1.01
COPS3-207ENST00000477299 U2SURPO15042 1029 aaKnown RBP21.35■■□□□ 1.01
COPS3-207ENST00000477299 HMOX1P09601 288 aa21.35■■□□□ 1.01
COPS3-207ENST00000477299 DIEXFQ68CQ4 756 aaKnown RBP21.35■■□□□ 1.01
COPS3-207ENST00000477299 CFAP53Q96M91 514 aa21.35■■□□□ 1.01
COPS3-207ENST00000477299 IL2RBP14784 551 aa21.34■■□□□ 1.01
COPS3-207ENST00000477299 SULT6B1Q6IMI4 303 aa21.34■■□□□ 1.01
COPS3-207ENST00000477299 SHANK3Q9BYB0 1731 aa21.34■■□□□ 1.01
COPS3-207ENST00000477299 DDB1Q16531 1140 aa21.29■■□□□ 1
COPS3-207ENST00000477299 MARCH10Q8NA82 808 aaPredicted RBP21.29■■□□□ 1
COPS3-207ENST00000477299 RAPGEF4Q8WZA2 1011 aa21.29■■□□□ 1
COPS3-207ENST00000477299 KAT6BQ8WYB5 2073 aa21.28■■□□□ 1
COPS3-207ENST00000477299 KDRP35968 1356 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms