RNA–Protein interactions for RNA: ENST00000477289.1

NSMCE4A-208, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, humanhuman

TSL 2

Gene NSMCE4A, Length 643 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE4A-208ENST00000477289 C4orf48Q5BLP8 95 aa8.05□□□□□ -1.12
NSMCE4A-208ENST00000477289 TSC1Q92574 1164 aa8.05□□□□□ -1.12
NSMCE4A-208ENST00000477289 POLR3EQ9NVU0 708 aa8.05□□□□□ -1.12
NSMCE4A-208ENST00000477289 BAZ1AQ9NRL2 1556 aaPredicted RBP8.05□□□□□ -1.12
NSMCE4A-208ENST00000477289 AGERQ15109 404 aa8.03□□□□□ -1.12
NSMCE4A-208ENST00000477289 FBXO31Q5XUX0 539 aaPredicted RBP8.03□□□□□ -1.12
NSMCE4A-208ENST00000477289 GPBP1L1Q9HC44 474 aaPredicted RBP8.03□□□□□ -1.12
NSMCE4A-208ENST00000477289 RSPH6AQ9H0K4 717 aa8.02□□□□□ -1.13
NSMCE4A-208ENST00000477289 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.01□□□□□ -1.13
NSMCE4A-208ENST00000477289 BPHLQ86WA6 291 aaPredicted RBP8.01□□□□□ -1.13
NSMCE4A-208ENST00000477289 COL25A1Q9BXS0 654 aaPredicted RBP8.01□□□□□ -1.13
NSMCE4A-208ENST00000477289 CECR2Q9BXF3 1484 aa8□□□□□ -1.13
NSMCE4A-208ENST00000477289 CC2D2AQ9P2K1 1620 aa8□□□□□ -1.13
NSMCE4A-208ENST00000477289 PTSQ03393 145 aa8□□□□□ -1.13
NSMCE4A-208ENST00000477289 ZNF385CQ66K41 422 aaPredicted RBP8□□□□□ -1.13
NSMCE4A-208ENST00000477289 HELBQ8NG08 1087 aaPredicted RBP8□□□□□ -1.13
NSMCE4A-208ENST00000477289 KDM4CQ9H3R0 1056 aa8□□□□□ -1.13
NSMCE4A-208ENST00000477289 TTLL8A6PVC2 850 aa7.99□□□□□ -1.13
NSMCE4A-208ENST00000477289 FSHRP23945 695 aa7.99□□□□□ -1.13
NSMCE4A-208ENST00000477289 CTDSPL2Q05D32 466 aa7.99□□□□□ -1.13
NSMCE4A-208ENST00000477289 SH3RF1Q7Z6J0 888 aa7.99□□□□□ -1.13
NSMCE4A-208ENST00000477289 BCANQ96GW7 911 aa7.99□□□□□ -1.13
NSMCE4A-208ENST00000477289 TSEN34Q9BSV6 310 aaKnown RBP7.99□□□□□ -1.13
NSMCE4A-208ENST00000477289 C1QTNF2Q9BXJ5 285 aa7.99□□□□□ -1.13
NSMCE4A-208ENST00000477289 FAM117AQ9C073 453 aa7.99□□□□□ -1.13
NSMCE4A-208ENST00000477289 SMARCA4P51532 1647 aa7.99□□□□□ -1.13
NSMCE4A-208ENST00000477289 SKIV2LQ15477 1246 aaKnown RBP7.98□□□□□ -1.13
NSMCE4A-208ENST00000477289 SH3D19Q5HYK7 790 aa7.98□□□□□ -1.13
NSMCE4A-208ENST00000477289 SH3BP5LQ7L8J4 393 aa7.98□□□□□ -1.13
NSMCE4A-208ENST00000477289 PROCA1Q8NCQ7 364 aaPredicted RBP7.98□□□□□ -1.13
NSMCE4A-208ENST00000477289 ARMC2Q8NEN0 867 aa7.98□□□□□ -1.13
NSMCE4A-208ENST00000477289 NANOS1Q8WY41 292 aaKnown RBP7.98□□□□□ -1.13
NSMCE4A-208ENST00000477289 SMARCA2P51531 1590 aa7.97□□□□□ -1.13
NSMCE4A-208ENST00000477289 RNFT1Q5M7Z0 435 aa7.97□□□□□ -1.13
NSMCE4A-208ENST00000477289 GPAT2Q6NUI2 795 aa7.97□□□□□ -1.13
NSMCE4A-208ENST00000477289 SVOPQ8N4V2 548 aa7.97□□□□□ -1.13
NSMCE4A-208ENST00000477289 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.97□□□□□ -1.13
NSMCE4A-208ENST00000477289 FIGNL2A6NMB9 653 aa7.96□□□□□ -1.14
NSMCE4A-208ENST00000477289 IRS1P35568 1242 aa7.96□□□□□ -1.14
NSMCE4A-208ENST00000477289 WHAMMQ8TF30 809 aa7.96□□□□□ -1.14
NSMCE4A-208ENST00000477289 MAP4K5Q9Y4K4 846 aa7.96□□□□□ -1.14
NSMCE4A-208ENST00000477289 EMILIN1Q9Y6C2 1016 aa7.96□□□□□ -1.14
NSMCE4A-208ENST00000477289 DNMT3AQ9Y6K1 912 aaPredicted RBP7.96□□□□□ -1.14
NSMCE4A-208ENST00000477289 NBPF14Q5TI25 921 aa7.95□□□□□ -1.14
NSMCE4A-208ENST00000477289 VASH1Q7L8A9 365 aaPredicted RBP7.95□□□□□ -1.14
NSMCE4A-208ENST00000477289 CCDC116Q8IYX3 515 aa7.95□□□□□ -1.14
NSMCE4A-208ENST00000477289 CCDC155Q8N6L0 562 aa7.95□□□□□ -1.14
NSMCE4A-208ENST00000477289 LRRN4Q8WUT4 740 aa7.95□□□□□ -1.14
NSMCE4A-208ENST00000477289 ARHGEF15O94989 841 aa7.94□□□□□ -1.14
NSMCE4A-208ENST00000477289 SLURP2P0DP57 97 aa7.94□□□□□ -1.14
NSMCE4A-208ENST00000477289 PPP2R2DQ66LE6 453 aa7.94□□□□□ -1.14
NSMCE4A-208ENST00000477289 TRMT44Q8IYL2 757 aaKnown RBP7.94□□□□□ -1.14
NSMCE4A-208ENST00000477289 DDRGK1Q96HY6 314 aa7.94□□□□□ -1.14
NSMCE4A-208ENST00000477289 MROH2BQ7Z745 1585 aa7.93□□□□□ -1.14
NSMCE4A-208ENST00000477289 IGHA1P01876 353 aa7.93□□□□□ -1.14
NSMCE4A-208ENST00000477289 BAZ1BQ9UIG0 1483 aaKnown RBP7.93□□□□□ -1.14
NSMCE4A-208ENST00000477289 ATAD2BQ9ULI0 1458 aa7.93□□□□□ -1.14
NSMCE4A-208ENST00000477289 MAGEB6P1A0A0J9YX57 407 aa7.92□□□□□ -1.14
NSMCE4A-208ENST00000477289 SLC35F4A4IF30 521 aa7.92□□□□□ -1.14
NSMCE4A-208ENST00000477289 GPKOWQ92917 476 aaPredicted RBP eCLIP7.92□□□□□ -1.14
NSMCE4A-208ENST00000477289 NCAPD3P42695 1498 aa7.92□□□□□ -1.14
NSMCE4A-208ENST00000477289 SPINT1O43278 529 aa7.91□□□□□ -1.14
NSMCE4A-208ENST00000477289 SLC24A1O60721 1099 aa7.91□□□□□ -1.14
NSMCE4A-208ENST00000477289 ITGA6P23229 1130 aa7.91□□□□□ -1.14
NSMCE4A-208ENST00000477289 MARSP56192 900 aaKnown RBP7.91□□□□□ -1.14
NSMCE4A-208ENST00000477289 ERFEQ4G0M1 354 aa7.91□□□□□ -1.14
NSMCE4A-208ENST00000477289 KANK3Q6NY19 840 aa7.91□□□□□ -1.14
NSMCE4A-208ENST00000477289 VWA5B2Q8N398 1253 aa7.91□□□□□ -1.14
NSMCE4A-208ENST00000477289 CARD14Q9BXL6 1004 aa7.91□□□□□ -1.14
NSMCE4A-208ENST00000477289 RSF1Q96T23 1441 aaPredicted RBP7.9□□□□□ -1.14
NSMCE4A-208ENST00000477289 FOXK2Q01167 660 aa7.9□□□□□ -1.14
NSMCE4A-208ENST00000477289 CBLBQ13191 982 aa7.9□□□□□ -1.14
NSMCE4A-208ENST00000477289 NR6A1Q15406 480 aa7.9□□□□□ -1.14
NSMCE4A-208ENST00000477289 PDXDC2PQ6P474 469 aa7.9□□□□□ -1.14
NSMCE4A-208ENST00000477289 Q6ZVU0 165 aa7.9□□□□□ -1.14
NSMCE4A-208ENST00000477289 FKBPLQ9UIM3 349 aa7.9□□□□□ -1.14
NSMCE4A-208ENST00000477289 HMGXB3Q12766 1538 aa7.89□□□□□ -1.15
NSMCE4A-208ENST00000477289 CDC14CA4D256 554 aa7.89□□□□□ -1.15
NSMCE4A-208ENST00000477289 SUPT5HO00267 1087 aaKnown RBP7.89□□□□□ -1.15
NSMCE4A-208ENST00000477289 PPP1R26Q5T8A7 1209 aaPredicted RBP7.89□□□□□ -1.15
NSMCE4A-208ENST00000477289 SV2AQ7L0J3 742 aa7.89□□□□□ -1.15
NSMCE4A-208ENST00000477289 OCSTAMPQ9BR26 566 aa7.89□□□□□ -1.15
NSMCE4A-208ENST00000477289 PGPEP1Q9NXJ5 209 aa7.89□□□□□ -1.15
NSMCE4A-208ENST00000477289 PEG3Q9GZU2 1588 aa7.88□□□□□ -1.15
NSMCE4A-208ENST00000477289 AP1G2O75843 785 aa7.88□□□□□ -1.15
NSMCE4A-208ENST00000477289 EPS8L1Q8TE68 723 aa7.88□□□□□ -1.15
NSMCE4A-208ENST00000477289 SCARF2Q96GP6 870 aaPredicted RBP7.88□□□□□ -1.15
NSMCE4A-208ENST00000477289 ARHGAP9Q9BRR9 750 aa7.87□□□□□ -1.15
NSMCE4A-208ENST00000477289 HMX1Q9NP08 348 aaPredicted RBP7.87□□□□□ -1.15
NSMCE4A-208ENST00000477289 WIZO95785 1651 aa7.86□□□□□ -1.15
NSMCE4A-208ENST00000477289 ZC3H4Q9UPT8 1303 aaKnown RBP7.85□□□□□ -1.15
NSMCE4A-208ENST00000477289 ADAMTS2O95450 1211 aa7.85□□□□□ -1.15
NSMCE4A-208ENST00000477289 CTSOP43234 321 aaPredicted RBP7.85□□□□□ -1.15
NSMCE4A-208ENST00000477289 LYPD4Q6UWN0 246 aa7.85□□□□□ -1.15
NSMCE4A-208ENST00000477289 ATP1B4Q9UN42 357 aaPredicted RBP7.85□□□□□ -1.15
NSMCE4A-208ENST00000477289 USP17L8P0C7I0 530 aa7.84□□□□□ -1.15
NSMCE4A-208ENST00000477289 RFC5P40937 340 aa7.84□□□□□ -1.15
NSMCE4A-208ENST00000477289 XP32Q5T750 250 aa7.84□□□□□ -1.15
NSMCE4A-208ENST00000477289 AGBL1Q96MI9 1066 aa7.84□□□□□ -1.15
NSMCE4A-208ENST00000477289 KCTD15Q96SI1 283 aaPredicted RBP7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 139.3 ms