RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 EFCAB5A4FU69 1503 aa22.08■■□□□ 1.12
VARS2-209ENST00000477288 SPG7Q9UQ90 795 aa22.08■■□□□ 1.12
VARS2-209ENST00000477288 LETM1O95202 739 aaPredicted RBP22.07■■□□□ 1.12
VARS2-209ENST00000477288 STK3Q13188 491 aa22.07■■□□□ 1.12
VARS2-209ENST00000477288 TSPY26PQ9H489 355 aa22.07■■□□□ 1.12
VARS2-209ENST00000477288 PRPF40AO75400 957 aaKnown RBP22.07■■□□□ 1.12
VARS2-209ENST00000477288 ZNF530Q6P9A1 599 aaPredicted RBP22.07■■□□□ 1.12
VARS2-209ENST00000477288 FIBPO43427 364 aa22.07■■□□□ 1.12
VARS2-209ENST00000477288 SPC24Q8NBT2 197 aa22.07■■□□□ 1.12
VARS2-209ENST00000477288 SULT6B1Q6IMI4 303 aa22.07■■□□□ 1.12
VARS2-209ENST00000477288 TANGO6Q9C0B7 1094 aa22.06■■□□□ 1.12
VARS2-209ENST00000477288 CCDC69A6NI79 296 aa22.06■■□□□ 1.12
VARS2-209ENST00000477288 MAP4K4O95819 1239 aaPredicted RBP22.06■■□□□ 1.12
VARS2-209ENST00000477288 ZSCAN29Q8IWY8 852 aaPredicted RBP22.06■■□□□ 1.12
VARS2-209ENST00000477288 NUP133Q8WUM0 1156 aa22.06■■□□□ 1.12
VARS2-209ENST00000477288 CC2D2AQ9P2K1 1620 aa22.06■■□□□ 1.12
VARS2-209ENST00000477288 CWC15Q9P013 229 aaKnown RBP22.06■■□□□ 1.12
VARS2-209ENST00000477288 NFKBIBQ15653 356 aa22.05■■□□□ 1.12
VARS2-209ENST00000477288 NOB1Q9ULX3 412 aaKnown RBP22.05■■□□□ 1.12
VARS2-209ENST00000477288 SOGA3Q5TF21 947 aa22.05■■□□□ 1.12
VARS2-209ENST00000477288 THEMISQ8N1K5 641 aaPredicted RBP22.05■■□□□ 1.12
VARS2-209ENST00000477288 CDK19Q9BWU1 502 aa22.04■■□□□ 1.12
VARS2-209ENST00000477288 ZNHIT6Q9NWK9 470 aaKnown RBP22.04■■□□□ 1.12
VARS2-209ENST00000477288 SERPINC1P01008 464 aa22.04■■□□□ 1.12
VARS2-209ENST00000477288 SEPT7Q16181 437 aaKnown RBP22.04■■□□□ 1.12
VARS2-209ENST00000477288 CCDC57Q2TAC2 916 aa22.04■■□□□ 1.12
VARS2-209ENST00000477288 MRE11P49959 708 aa22.04■■□□□ 1.12
VARS2-209ENST00000477288 BICDL1Q6ZP65 573 aa22.04■■□□□ 1.12
VARS2-209ENST00000477288 ERLIN2O94905 339 aa22.03■■□□□ 1.12
VARS2-209ENST00000477288 PDCP20941 246 aa22.03■■□□□ 1.12
VARS2-209ENST00000477288 ZRSR2Q15696 482 aaKnown RBP22.03■■□□□ 1.12
VARS2-209ENST00000477288 TRIM22Q8IYM9 498 aa22.03■■□□□ 1.12
VARS2-209ENST00000477288 DEF6Q9H4E7 631 aa22.03■■□□□ 1.12
VARS2-209ENST00000477288 TSR2Q969E8 191 aaKnown RBP22.02■■□□□ 1.12
VARS2-209ENST00000477288 MPHOSPH10O00566 681 aaKnown RBP22.02■■□□□ 1.12
VARS2-209ENST00000477288 FKBP4Q02790 459 aaKnown RBP eCLIP22.02■■□□□ 1.12
VARS2-209ENST00000477288 CCP110O43303 1012 aa22.02■■□□□ 1.12
VARS2-209ENST00000477288 CT47B1P0C2W7 299 aaPredicted RBP22.02■■□□□ 1.11
VARS2-209ENST00000477288 PPP2R1AP30153 589 aa22.02■■□□□ 1.11
VARS2-209ENST00000477288 FANCIQ9NVI1 1328 aa22.02■■□□□ 1.11
VARS2-209ENST00000477288 PIP4K2AP48426 406 aaPredicted RBP22.01■■□□□ 1.11
VARS2-209ENST00000477288 TRAK2O60296 914 aa22.01■■□□□ 1.11
VARS2-209ENST00000477288 DHX37Q8IY37 1157 aaKnown RBP22.01■■□□□ 1.11
VARS2-209ENST00000477288 PNISRQ8TF01 805 aaKnown RBP22.01■■□□□ 1.11
VARS2-209ENST00000477288 IBSPP21815 317 aaPredicted RBP22.01■■□□□ 1.11
VARS2-209ENST00000477288 ENOX2Q16206 610 aaKnown RBP22.01■■□□□ 1.11
VARS2-209ENST00000477288 CABP1Q9NZU7 370 aa22■■□□□ 1.11
VARS2-209ENST00000477288 PRDM11Q9NQV5 511 aa22■■□□□ 1.11
VARS2-209ENST00000477288 SEPT11Q9NVA2 429 aaKnown RBP22■■□□□ 1.11
VARS2-209ENST00000477288 PDZRN3Q9UPQ7 1066 aa22■■□□□ 1.11
VARS2-209ENST00000477288 CCDC181Q5TID7 509 aa22■■□□□ 1.11
VARS2-209ENST00000477288 CYP46A1Q9Y6A2 500 aa22■■□□□ 1.11
VARS2-209ENST00000477288 SRCIN1Q9C0H9 1055 aa22■■□□□ 1.11
VARS2-209ENST00000477288 SPINK5Q9NQ38 1064 aaPredicted RBP22■■□□□ 1.11
VARS2-209ENST00000477288 PPFIBP1Q86W92 1011 aa21.99■■□□□ 1.11
VARS2-209ENST00000477288 CDCA7LQ96GN5 454 aa21.99■■□□□ 1.11
VARS2-209ENST00000477288 LRRCC1Q9C099 1032 aa21.99■■□□□ 1.11
VARS2-209ENST00000477288 JMYQ8N9B5 988 aa21.99■■□□□ 1.11
VARS2-209ENST00000477288 TROQ12816 1431 aaPredicted RBP21.99■■□□□ 1.11
VARS2-209ENST00000477288 CCT4P50991 539 aaKnown RBP21.98■■□□□ 1.11
VARS2-209ENST00000477288 GOLGA6L10A6NI86 522 aa21.98■■□□□ 1.11
VARS2-209ENST00000477288 ZSCAN25Q6NSZ9 544 aa21.98■■□□□ 1.11
VARS2-209ENST00000477288 LEKR1Q6ZMV7 388 aa21.98■■□□□ 1.11
VARS2-209ENST00000477288 MCM2P49736 904 aa21.98■■□□□ 1.11
VARS2-209ENST00000477288 XPCQ01831 940 aaPredicted RBP21.98■■□□□ 1.11
VARS2-209ENST00000477288 GCC1Q96CN9 775 aa21.98■■□□□ 1.11
VARS2-209ENST00000477288 MBD3O95983 291 aa21.98■■□□□ 1.11
VARS2-209ENST00000477288 RAI14Q9P0K7 980 aa21.98■■□□□ 1.11
VARS2-209ENST00000477288 BRD4O60885 1362 aaPredicted RBP21.97■■□□□ 1.11
VARS2-209ENST00000477288 MATR3P43243 847 aaKnown RBP eCLIP21.97■■□□□ 1.11
VARS2-209ENST00000477288 STIM1Q13586 685 aa21.97■■□□□ 1.11
VARS2-209ENST00000477288 EHBP1L1Q8N3D4 1523 aa21.97■■□□□ 1.11
VARS2-209ENST00000477288 HFM1A2PYH4 1435 aa21.97■■□□□ 1.11
VARS2-209ENST00000477288 SSBP05455 408 aaKnown RBP eCLIP21.96■■□□□ 1.11
VARS2-209ENST00000477288 ANKRD18AQ8IVF6 992 aa21.96■■□□□ 1.11
VARS2-209ENST00000477288 FAM177A1Q8N128 213 aaPredicted RBP21.96■■□□□ 1.11
VARS2-209ENST00000477288 CENPHQ9H3R5 247 aa21.96■■□□□ 1.11
VARS2-209ENST00000477288 ME1P48163 572 aa21.96■■□□□ 1.11
VARS2-209ENST00000477288 TDO2P48775 406 aa21.96■■□□□ 1.11
VARS2-209ENST00000477288 ZNF692Q9BU19 519 aaPredicted RBP21.96■■□□□ 1.11
VARS2-209ENST00000477288 TAX1BP1Q86VP1 789 aa21.96■■□□□ 1.11
VARS2-209ENST00000477288 RABEP1Q15276 862 aa21.96■■□□□ 1.11
VARS2-209ENST00000477288 AACSQ86V21 672 aa21.96■■□□□ 1.11
VARS2-209ENST00000477288 SLC12A5Q9H2X9 1139 aa21.95■■□□□ 1.1
VARS2-209ENST00000477288 HSP90AB3PQ58FF7 597 aa21.95■■□□□ 1.1
VARS2-209ENST00000477288 MPNDQ8N594 471 aa21.95■■□□□ 1.1
VARS2-209ENST00000477288 BTBD11A6QL63 1104 aa21.95■■□□□ 1.1
VARS2-209ENST00000477288 C9orf84Q5VXU9 1444 aa21.95■■□□□ 1.1
VARS2-209ENST00000477288 ZNF76P36508 570 aa21.95■■□□□ 1.1
VARS2-209ENST00000477288 PIBF1Q8WXW3 757 aa21.95■■□□□ 1.1
VARS2-209ENST00000477288 CCDC85AQ96PX6 553 aaPredicted RBP21.95■■□□□ 1.1
VARS2-209ENST00000477288 SNAPC4Q5SXM2 1469 aa21.94■■□□□ 1.1
VARS2-209ENST00000477288 ANKLE2Q86XL3 938 aa21.94■■□□□ 1.1
VARS2-209ENST00000477288 NOL7Q9UMY1 257 aaKnown RBP21.94■■□□□ 1.1
VARS2-209ENST00000477288 ANKRD1Q15327 319 aa21.94■■□□□ 1.1
VARS2-209ENST00000477288 SLC26A8Q96RN1 970 aa21.94■■□□□ 1.1
VARS2-209ENST00000477288 TNMDQ9H2S6 317 aa21.93■■□□□ 1.1
VARS2-209ENST00000477288 LUC7LQ9NQ29 371 aaKnown RBP21.93■■□□□ 1.1
VARS2-209ENST00000477288 PLEKHH2Q8IVE3 1493 aa21.93■■□□□ 1.1
VARS2-209ENST00000477288 UBAC1Q9BSL1 405 aa21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 429 ms