RNA–Protein interactions for RNA: ENST00000477237.1

XRN1-211, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-211ENST00000477237 Q6ZVU0 165 aa8.14□□□□□ -1.11
XRN1-211ENST00000477237 ZBTB3Q9H5J0 574 aa8.14□□□□□ -1.11
XRN1-211ENST00000477237 PPP1R26Q5T8A7 1209 aaPredicted RBP8.13□□□□□ -1.11
XRN1-211ENST00000477237 CABLES1Q8TDN4 633 aa8.13□□□□□ -1.11
XRN1-211ENST00000477237 MAGEB6P1A0A0J9YX57 407 aa8.12□□□□□ -1.11
XRN1-211ENST00000477237 SH3BP5LQ7L8J4 393 aa8.12□□□□□ -1.11
XRN1-211ENST00000477237 MSTNO14793 375 aa8.11□□□□□ -1.11
XRN1-211ENST00000477237 ITGB2P05107 769 aa8.11□□□□□ -1.11
XRN1-211ENST00000477237 CTSOP43234 321 aaPredicted RBP8.11□□□□□ -1.11
XRN1-211ENST00000477237 PLA2G4EQ3MJ16 856 aa8.11□□□□□ -1.11
XRN1-211ENST00000477237 ARMC2Q8NEN0 867 aa8.11□□□□□ -1.11
XRN1-211ENST00000477237 PLCB2Q00722 1185 aa8.1□□□□□ -1.11
XRN1-211ENST00000477237 AMHR2Q16671 573 aa8.1□□□□□ -1.11
XRN1-211ENST00000477237 PRPF38BQ5VTL8 546 aaKnown RBP8.1□□□□□ -1.11
XRN1-211ENST00000477237 SPOCK3Q9BQ16 436 aa8.1□□□□□ -1.11
XRN1-211ENST00000477237 PGPEP1Q9NXJ5 209 aa8.1□□□□□ -1.11
XRN1-211ENST00000477237 SENP3-EIF4A1A0A087X0R7 540 aa8.09□□□□□ -1.11
XRN1-211ENST00000477237 CELA2BP08218 269 aaPredicted RBP8.09□□□□□ -1.11
XRN1-211ENST00000477237 NBPF14Q5TI25 921 aa8.09□□□□□ -1.11
XRN1-211ENST00000477237 TSC1Q92574 1164 aa8.09□□□□□ -1.11
XRN1-211ENST00000477237 DCAF5Q96JK2 942 aa8.09□□□□□ -1.11
XRN1-211ENST00000477237 AGBL1Q96MI9 1066 aa8.09□□□□□ -1.11
XRN1-211ENST00000477237 CARD14Q9BXL6 1004 aa8.09□□□□□ -1.11
XRN1-211ENST00000477237 KRTAP4-8Q9BYQ9 185 aa8.09□□□□□ -1.11
XRN1-211ENST00000477237 MAP3K10Q02779 954 aa8.08□□□□□ -1.12
XRN1-211ENST00000477237 SRSF11Q05519 484 aaKnown RBP8.08□□□□□ -1.12
XRN1-211ENST00000477237 GAS6Q14393 721 aa8.08□□□□□ -1.12
XRN1-211ENST00000477237 DIXDC1Q155Q3 683 aa8.08□□□□□ -1.12
XRN1-211ENST00000477237 CSPP1Q1MSJ5 1256 aa8.08□□□□□ -1.12
XRN1-211ENST00000477237 ERFEQ4G0M1 354 aa8.08□□□□□ -1.12
XRN1-211ENST00000477237 RIC3Q7Z5B4 369 aa8.08□□□□□ -1.12
XRN1-211ENST00000477237 INSM2Q96T92 566 aaPredicted RBP8.08□□□□□ -1.12
XRN1-211ENST00000477237 KDM2AQ9Y2K7 1162 aa8.08□□□□□ -1.12
XRN1-211ENST00000477237 CNTNAP5Q8WYK1 1306 aa8.07□□□□□ -1.12
XRN1-211ENST00000477237 PROCP04070 461 aa8.06□□□□□ -1.12
XRN1-211ENST00000477237 RELBQ01201 579 aa8.06□□□□□ -1.12
XRN1-211ENST00000477237 RNF217Q8TC41 542 aa8.06□□□□□ -1.12
XRN1-211ENST00000477237 CUEDC1Q9NWM3 386 aaPredicted RBP8.06□□□□□ -1.12
XRN1-211ENST00000477237 QPCTQ16769 361 aa8.04□□□□□ -1.12
XRN1-211ENST00000477237 POLMQ9NP87 494 aaPredicted RBP8.04□□□□□ -1.12
XRN1-211ENST00000477237 KCTD15Q96SI1 283 aaPredicted RBP8.03□□□□□ -1.12
XRN1-211ENST00000477237 ZNF395Q9H8N7 513 aaPredicted RBP8.03□□□□□ -1.12
XRN1-211ENST00000477237 ENAMQ9NRM1 1142 aa8.03□□□□□ -1.12
XRN1-211ENST00000477237 PHF20L1A8MW92 1017 aa8.02□□□□□ -1.13
XRN1-211ENST00000477237 BARGINQ6ZT62 677 aa8.02□□□□□ -1.13
XRN1-211ENST00000477237 LIMD1Q9UGP4 676 aa8.02□□□□□ -1.13
XRN1-211ENST00000477237 NUTM2BA6NNL0 878 aaPredicted RBP8.01□□□□□ -1.13
XRN1-211ENST00000477237 NUTM2EB1AL46 878 aaPredicted RBP8.01□□□□□ -1.13
XRN1-211ENST00000477237 NUTM2DQ5VT03 806 aaPredicted RBP8.01□□□□□ -1.13
XRN1-211ENST00000477237 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.01□□□□□ -1.13
XRN1-211ENST00000477237 NUTM2AQ8IVF1 878 aaPredicted RBP8.01□□□□□ -1.13
XRN1-211ENST00000477237 PARP9Q8IXQ6 854 aa8.01□□□□□ -1.13
XRN1-211ENST00000477237 GPKOWQ92917 476 aaPredicted RBP eCLIP8.01□□□□□ -1.13
XRN1-211ENST00000477237 LILRB3O75022 631 aa8□□□□□ -1.13
XRN1-211ENST00000477237 DHX9Q08211 1270 aaKnown RBP8□□□□□ -1.13
XRN1-211ENST00000477237 FOXD4L5Q5VV16 416 aaPredicted RBP8□□□□□ -1.13
XRN1-211ENST00000477237 INTS6LQ5JSJ4 861 aaKnown RBP7.99□□□□□ -1.13
XRN1-211ENST00000477237 BEND7Q8N7W2 519 aaPredicted RBP7.99□□□□□ -1.13
XRN1-211ENST00000477237 GALNT6Q8NCL4 622 aa7.99□□□□□ -1.13
XRN1-211ENST00000477237 K7ELQ4 463 aaPredicted RBP7.98□□□□□ -1.13
XRN1-211ENST00000477237 ZMYND10O75800 440 aa7.98□□□□□ -1.13
XRN1-211ENST00000477237 RTL5Q5HYW3 569 aaPredicted RBP7.98□□□□□ -1.13
XRN1-211ENST00000477237 SLC10A4Q96EP9 437 aa7.98□□□□□ -1.13
XRN1-211ENST00000477237 ARHGAP9Q9BRR9 750 aa7.98□□□□□ -1.13
XRN1-211ENST00000477237 MBIPQ9NS73 344 aa7.98□□□□□ -1.13
XRN1-211ENST00000477237 IGF1RP08069 1367 aa7.97□□□□□ -1.13
XRN1-211ENST00000477237 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.97□□□□□ -1.13
XRN1-211ENST00000477237 GPR25O00155 361 aa7.97□□□□□ -1.13
XRN1-211ENST00000477237 HAP1P54257 671 aaPredicted RBP7.97□□□□□ -1.13
XRN1-211ENST00000477237 Q8N3U1 123 aa7.97□□□□□ -1.13
XRN1-211ENST00000477237 HELBQ8NG08 1087 aaPredicted RBP7.97□□□□□ -1.13
XRN1-211ENST00000477237 NEDD1Q8NHV4 660 aa7.97□□□□□ -1.13
XRN1-211ENST00000477237 TMPRSS4Q9NRS4 437 aa7.97□□□□□ -1.13
XRN1-211ENST00000477237 CDV3Q9UKY7 258 aaKnown RBP7.97□□□□□ -1.13
XRN1-211ENST00000477237 BCRP11274 1271 aa7.96□□□□□ -1.14
XRN1-211ENST00000477237 TUSC1Q2TAM9 212 aa7.96□□□□□ -1.14
XRN1-211ENST00000477237 MYSM1Q5VVJ2 828 aa7.96□□□□□ -1.14
XRN1-211ENST00000477237 PDXDC2PQ6P474 469 aa7.96□□□□□ -1.14
XRN1-211ENST00000477237 PODNQ7Z5L7 613 aa7.96□□□□□ -1.14
XRN1-211ENST00000477237 KDF1Q8NAX2 398 aaPredicted RBP7.96□□□□□ -1.14
XRN1-211ENST00000477237 ZNF837Q96EG3 531 aaPredicted RBP7.96□□□□□ -1.14
XRN1-211ENST00000477237 LYSMD3Q7Z3D4 306 aa7.95□□□□□ -1.14
XRN1-211ENST00000477237 ACDQ96AP0 544 aa7.95□□□□□ -1.14
XRN1-211ENST00000477237 PSMG3-AS1Q96PY0 264 aa7.95□□□□□ -1.14
XRN1-211ENST00000477237 KRTAP9-2Q9BYQ4 174 aa7.95□□□□□ -1.14
XRN1-211ENST00000477237 ADH1AP07327 375 aa7.94□□□□□ -1.14
XRN1-211ENST00000477237 ADD1P35611 737 aaKnown RBP7.94□□□□□ -1.14
XRN1-211ENST00000477237 ZNF784Q8NCA9 323 aaPredicted RBP7.94□□□□□ -1.14
XRN1-211ENST00000477237 RHOQP17081 205 aa7.93□□□□□ -1.14
XRN1-211ENST00000477237 PTGIRP43119 386 aa7.93□□□□□ -1.14
XRN1-211ENST00000477237 BAG6P46379 1132 aa7.93□□□□□ -1.14
XRN1-211ENST00000477237 ZBTB33Q86T24 672 aa7.93□□□□□ -1.14
XRN1-211ENST00000477237 TRIM22Q8IYM9 498 aa7.93□□□□□ -1.14
XRN1-211ENST00000477237 OCSTAMPQ9BR26 566 aa7.93□□□□□ -1.14
XRN1-211ENST00000477237 KRTAP9-6A0A140TA67 174 aa7.92□□□□□ -1.14
XRN1-211ENST00000477237 LILRA1O75019 489 aa7.92□□□□□ -1.14
XRN1-211ENST00000477237 DBN1Q16643 649 aa7.92□□□□□ -1.14
XRN1-211ENST00000477237 PRICKLE2Q7Z3G6 844 aa7.92□□□□□ -1.14
XRN1-211ENST00000477237 FKBPLQ9UIM3 349 aa7.92□□□□□ -1.14
XRN1-211ENST00000477237 KRBA1A5PL33 1030 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms