RNA–Protein interactions for RNA: ENST00000477132.1

PRKD3-209, Transcript of protein kinase D3, humanhuman

TSL 4

Gene PRKD3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-209ENST00000477132 KIF20BQ96Q89 1820 aa17.17■□□□□ 0.34
PRKD3-209ENST00000477132 ZBTB7CA1YPR0 619 aa17.17■□□□□ 0.34
PRKD3-209ENST00000477132 ONECUT3O60422 494 aaPredicted RBP17.17■□□□□ 0.34
PRKD3-209ENST00000477132 HSPA5P11021 654 aaKnown RBP17.17■□□□□ 0.34
PRKD3-209ENST00000477132 AATKQ6ZMQ8 1374 aa17.16■□□□□ 0.34
PRKD3-209ENST00000477132 SEPT12Q8IYM1 358 aa17.16■□□□□ 0.34
PRKD3-209ENST00000477132 SPATA31A1Q5TZJ5 1347 aa17.16■□□□□ 0.34
PRKD3-209ENST00000477132 WNK3Q9BYP7 1800 aa17.15■□□□□ 0.34
PRKD3-209ENST00000477132 EIF4G2P78344 907 aaKnown RBP eCLIP17.15■□□□□ 0.34
PRKD3-209ENST00000477132 FAM98CQ17RN3 349 aaKnown RBP17.15■□□□□ 0.34
PRKD3-209ENST00000477132 LARP1Q6PKG0 1096 aaKnown RBP17.15■□□□□ 0.34
PRKD3-209ENST00000477132 ARHGEF25Q86VW2 580 aa17.15■□□□□ 0.34
PRKD3-209ENST00000477132 EP400Q96L91 3159 aa17.14■□□□□ 0.33
PRKD3-209ENST00000477132 KCNH5Q8NCM2 988 aa17.14■□□□□ 0.33
PRKD3-209ENST00000477132 AXIN2Q9Y2T1 843 aa17.14■□□□□ 0.33
PRKD3-209ENST00000477132 ABCC6O95255 1503 aa17.13■□□□□ 0.33
PRKD3-209ENST00000477132 CDCA8Q53HL2 280 aa17.13■□□□□ 0.33
PRKD3-209ENST00000477132 EVA1CP58658 441 aa17.12■□□□□ 0.33
PRKD3-209ENST00000477132 USP35Q9P2H5 1018 aa17.12■□□□□ 0.33
PRKD3-209ENST00000477132 NCBP3Q53F19 620 aaKnown RBP17.11■□□□□ 0.33
PRKD3-209ENST00000477132 PARP4Q9UKK3 1724 aaKnown RBP17.1■□□□□ 0.33
PRKD3-209ENST00000477132 A0A0G2JS52 829 aa17.1■□□□□ 0.33
PRKD3-209ENST00000477132 MYT1Q01538 1121 aa17.1■□□□□ 0.33
PRKD3-209ENST00000477132 CARD14Q9BXL6 1004 aa17.1■□□□□ 0.33
PRKD3-209ENST00000477132 CRB1P82279 1406 aa17.1■□□□□ 0.33
PRKD3-209ENST00000477132 NSD3Q9BZ95 1437 aa17.09■□□□□ 0.33
PRKD3-209ENST00000477132 LRRC37A3O60309 1634 aa17.08■□□□□ 0.32
PRKD3-209ENST00000477132 C11orf95C9JLR9 678 aaPredicted RBP17.08■□□□□ 0.32
PRKD3-209ENST00000477132 KRT27Q7Z3Y8 459 aa17.08■□□□□ 0.32
PRKD3-209ENST00000477132 WDR17Q8IZU2 1322 aa17.07■□□□□ 0.32
PRKD3-209ENST00000477132 FYB1O15117 783 aa17.07■□□□□ 0.32
PRKD3-209ENST00000477132 BARGINQ6ZT62 677 aa17.07■□□□□ 0.32
PRKD3-209ENST00000477132 POLR3GLQ9BT43 218 aa17.07■□□□□ 0.32
PRKD3-209ENST00000477132 FBLN1P23142 703 aa17.06■□□□□ 0.32
PRKD3-209ENST00000477132 TCP11L2Q8N4U5 519 aa17.06■□□□□ 0.32
PRKD3-209ENST00000477132 GGNBP2Q9H3C7 697 aa17.06■□□□□ 0.32
PRKD3-209ENST00000477132 ANKRD26Q9UPS8 1709 aa17.05■□□□□ 0.32
PRKD3-209ENST00000477132 FAM182BQ5T319 152 aa17.05■□□□□ 0.32
PRKD3-209ENST00000477132 COG3Q96JB2 828 aa17.05■□□□□ 0.32
PRKD3-209ENST00000477132 RGPD2P0DJD1 1756 aa17.05■□□□□ 0.32
PRKD3-209ENST00000477132 PEAK1Q9H792 1746 aa17.04■□□□□ 0.32
PRKD3-209ENST00000477132 TOM1L2Q6ZVM7 507 aa17.04■□□□□ 0.32
PRKD3-209ENST00000477132 TNS1Q9HBL0 1735 aaKnown RBP17.04■□□□□ 0.32
PRKD3-209ENST00000477132 THRAP3Q9Y2W1 955 aaKnown RBP17.03■□□□□ 0.32
PRKD3-209ENST00000477132 FAM208AQ9UK61 1670 aaKnown RBP17.03■□□□□ 0.32
PRKD3-209ENST00000477132 ERBB3P21860 1342 aa17.02■□□□□ 0.32
PRKD3-209ENST00000477132 MAP3K19Q56UN5 1328 aa17.02■□□□□ 0.32
PRKD3-209ENST00000477132 RGPD1P0DJD0 1748 aa17.02■□□□□ 0.32
PRKD3-209ENST00000477132 DISP2A7MBM2 1401 aa17.02■□□□□ 0.31
PRKD3-209ENST00000477132 BLMP54132 1417 aaPredicted RBP17.02■□□□□ 0.31
PRKD3-209ENST00000477132 CSB-PGBD3P0DP91 1061 aa17■□□□□ 0.31
PRKD3-209ENST00000477132 CARD10Q9BWT7 1032 aa17■□□□□ 0.31
PRKD3-209ENST00000477132 KIF7Q2M1P5 1343 aa16.99■□□□□ 0.31
PRKD3-209ENST00000477132 NPM3O75607 178 aaKnown RBP16.99■□□□□ 0.31
PRKD3-209ENST00000477132 RRS1Q15050 365 aaKnown RBP16.99■□□□□ 0.31
PRKD3-209ENST00000477132 ANKRD24Q8TF21 1146 aa16.99■□□□□ 0.31
PRKD3-209ENST00000477132 IP6K1Q92551 441 aa16.99■□□□□ 0.31
PRKD3-209ENST00000477132 MAP2P11137 1827 aaKnown RBP16.98■□□□□ 0.31
PRKD3-209ENST00000477132 SBF2Q86WG5 1849 aa16.98■□□□□ 0.31
PRKD3-209ENST00000477132 HOXC9P31274 260 aa16.98■□□□□ 0.31
PRKD3-209ENST00000477132 PANK3Q9H999 370 aa16.98■□□□□ 0.31
PRKD3-209ENST00000477132 CCDC125Q86Z20 511 aa16.97■□□□□ 0.31
PRKD3-209ENST00000477132 RTL1A6NKG5 1358 aa16.97■□□□□ 0.31
PRKD3-209ENST00000477132 CCDC7Q96M83 1385 aa16.97■□□□□ 0.31
PRKD3-209ENST00000477132 DEFB132Q7Z7B7 95 aa16.96■□□□□ 0.31
PRKD3-209ENST00000477132 CGNL1Q0VF96 1302 aa16.96■□□□□ 0.3
PRKD3-209ENST00000477132 LTV1Q96GA3 475 aaPredicted RBP16.95■□□□□ 0.3
PRKD3-209ENST00000477132 NLRP2Q9NX02 1062 aa16.95■□□□□ 0.3
PRKD3-209ENST00000477132 AMPHP49418 695 aa16.94■□□□□ 0.3
PRKD3-209ENST00000477132 PDE3BQ13370 1112 aa16.94■□□□□ 0.3
PRKD3-209ENST00000477132 TNS2Q63HR2 1409 aa16.94■□□□□ 0.3
PRKD3-209ENST00000477132 SHANK3Q9BYB0 1731 aa16.93■□□□□ 0.3
PRKD3-209ENST00000477132 DDB1Q16531 1140 aa16.93■□□□□ 0.3
PRKD3-209ENST00000477132 FAM196AQ6ZSG2 479 aa16.92■□□□□ 0.3
PRKD3-209ENST00000477132 EMILIN1Q9Y6C2 1016 aa16.92■□□□□ 0.3
PRKD3-209ENST00000477132 OVOS2A0A0G2JMS6 1433 aa16.92■□□□□ 0.3
PRKD3-209ENST00000477132 FLT4P35916 1363 aa16.91■□□□□ 0.3
PRKD3-209ENST00000477132 TRIM37O94972 964 aa16.91■□□□□ 0.3
PRKD3-209ENST00000477132 HSP90AB2PQ58FF8 381 aa16.91■□□□□ 0.3
PRKD3-209ENST00000477132 CDCA7Q9BWT1 371 aaPredicted RBP16.91■□□□□ 0.3
PRKD3-209ENST00000477132 WASHC2AQ641Q2 1341 aa16.91■□□□□ 0.3
PRKD3-209ENST00000477132 INSRP06213 1382 aa16.9■□□□□ 0.3
PRKD3-209ENST00000477132 MARCH10Q8NA82 808 aaPredicted RBP16.9■□□□□ 0.3
PRKD3-209ENST00000477132 KIF24Q5T7B8 1368 aa16.89■□□□□ 0.3
PRKD3-209ENST00000477132 IL2RBP14784 551 aa16.89■□□□□ 0.29
PRKD3-209ENST00000477132 SF3B2Q13435 895 aaKnown RBP16.89■□□□□ 0.29
PRKD3-209ENST00000477132 MEGF6O75095 1541 aa16.89■□□□□ 0.29
PRKD3-209ENST00000477132 RREB1Q92766 1687 aa16.88■□□□□ 0.29
PRKD3-209ENST00000477132 NSD2O96028 1365 aa16.88■□□□□ 0.29
PRKD3-209ENST00000477132 TNNT2P45379 298 aaPredicted RBP16.87■□□□□ 0.29
PRKD3-209ENST00000477132 NBPF6Q5VWK0 638 aa16.87■□□□□ 0.29
PRKD3-209ENST00000477132 NBPF4Q96M43 638 aa16.87■□□□□ 0.29
PRKD3-209ENST00000477132 BCL9O00512 1426 aa16.87■□□□□ 0.29
PRKD3-209ENST00000477132 SMG6Q86US8 1419 aaKnown RBP16.87■□□□□ 0.29
PRKD3-209ENST00000477132 NHSQ6T4R5 1651 aa16.86■□□□□ 0.29
PRKD3-209ENST00000477132 EXOC5O00471 708 aa16.86■□□□□ 0.29
PRKD3-209ENST00000477132 BAG6P46379 1132 aa16.86■□□□□ 0.29
PRKD3-209ENST00000477132 EN1Q05925 392 aaPredicted RBP16.86■□□□□ 0.29
PRKD3-209ENST00000477132 AMER1Q5JTC6 1135 aaPredicted RBP16.86■□□□□ 0.29
PRKD3-209ENST00000477132 PTF1AQ7RTS3 328 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms