RNA–Protein interactions for RNA: ENST00000476640.1

HMGCS2-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

TSL 3

Gene HMGCS2, Length 857 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-203ENST00000476640 CAMKK2Q96RR4 588 aa18.99■□□□□ 0.63
HMGCS2-203ENST00000476640 LRRC37A3O60309 1634 aa18.99■□□□□ 0.63
HMGCS2-203ENST00000476640 ABCC6O95255 1503 aa18.98■□□□□ 0.63
HMGCS2-203ENST00000476640 USP54Q70EL1 1684 aa18.98■□□□□ 0.63
HMGCS2-203ENST00000476640 WDR17Q8IZU2 1322 aa18.98■□□□□ 0.63
HMGCS2-203ENST00000476640 NUP188Q5SRE5 1749 aa18.97■□□□□ 0.63
HMGCS2-203ENST00000476640 RGPD3A6NKT7 1758 aaPredicted RBP18.97■□□□□ 0.63
HMGCS2-203ENST00000476640 RGPD4Q7Z3J3 1758 aa18.97■□□□□ 0.63
HMGCS2-203ENST00000476640 R3HDM1Q15032 1099 aaKnown RBP18.97■□□□□ 0.63
HMGCS2-203ENST00000476640 CDCA7Q9BWT1 371 aaPredicted RBP18.97■□□□□ 0.63
HMGCS2-203ENST00000476640 OVOS2A0A0G2JMS6 1433 aa18.97■□□□□ 0.63
HMGCS2-203ENST00000476640 OVOS2A0A0J9YW53 1432 aa18.97■□□□□ 0.63
HMGCS2-203ENST00000476640 OVOS2Q6IE36 1432 aa18.97■□□□□ 0.63
HMGCS2-203ENST00000476640 PEAK1Q9H792 1746 aa18.97■□□□□ 0.63
HMGCS2-203ENST00000476640 DDB1Q16531 1140 aa18.96■□□□□ 0.63
HMGCS2-203ENST00000476640 ARHGEF25Q86VW2 580 aa18.96■□□□□ 0.63
HMGCS2-203ENST00000476640 LTN1O94822 1766 aa18.96■□□□□ 0.63
HMGCS2-203ENST00000476640 NFAT5O94916 1531 aa18.95■□□□□ 0.62
HMGCS2-203ENST00000476640 SOX12O15370 315 aa18.94■□□□□ 0.62
HMGCS2-203ENST00000476640 CSB-PGBD3P0DP91 1061 aa18.94■□□□□ 0.62
HMGCS2-203ENST00000476640 NBPF14Q5TI25 921 aa18.94■□□□□ 0.62
HMGCS2-203ENST00000476640 HDGFL2Q7Z4V5 671 aaPredicted RBP18.94■□□□□ 0.62
HMGCS2-203ENST00000476640 AXIN2Q9Y2T1 843 aa18.93■□□□□ 0.62
HMGCS2-203ENST00000476640 TMC1Q8TDI8 760 aa18.92■□□□□ 0.62
HMGCS2-203ENST00000476640 SLC24A1O60721 1099 aa18.91■□□□□ 0.62
HMGCS2-203ENST00000476640 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.91■□□□□ 0.62
HMGCS2-203ENST00000476640 PUS7Q96PZ0 661 aaKnown RBP18.91■□□□□ 0.62
HMGCS2-203ENST00000476640 CARD10Q9BWT7 1032 aa18.91■□□□□ 0.62
HMGCS2-203ENST00000476640 TERF2IPQ9NYB0 399 aa18.91■□□□□ 0.62
HMGCS2-203ENST00000476640 USP31Q70CQ4 1352 aa18.91■□□□□ 0.62
HMGCS2-203ENST00000476640 CCDC7Q96M83 1385 aa18.91■□□□□ 0.62
HMGCS2-203ENST00000476640 EDC4Q6P2E9 1401 aaKnown RBP18.9■□□□□ 0.62
HMGCS2-203ENST00000476640 CD163L1Q9NR16 1453 aa18.89■□□□□ 0.61
HMGCS2-203ENST00000476640 BCL9O00512 1426 aa18.87■□□□□ 0.61
HMGCS2-203ENST00000476640 NINLQ9Y2I6 1382 aa18.87■□□□□ 0.61
HMGCS2-203ENST00000476640 KAT6BQ8WYB5 2073 aa18.86■□□□□ 0.61
HMGCS2-203ENST00000476640 EXOC5O00471 708 aa18.86■□□□□ 0.61
HMGCS2-203ENST00000476640 PLSCR1O15162 318 aa18.86■□□□□ 0.61
HMGCS2-203ENST00000476640 BCL11BQ9C0K0 894 aaPredicted RBP18.86■□□□□ 0.61
HMGCS2-203ENST00000476640 NME9Q86XW9 330 aa18.85■□□□□ 0.61
HMGCS2-203ENST00000476640 SLC12A5Q9H2X9 1139 aa18.85■□□□□ 0.61
HMGCS2-203ENST00000476640 FAM208AQ9UK61 1670 aaKnown RBP18.85■□□□□ 0.61
HMGCS2-203ENST00000476640 A0A1W2PP64 1363 aa18.84■□□□□ 0.61
HMGCS2-203ENST00000476640 TRIM26Q12899 539 aaPredicted RBP18.84■□□□□ 0.61
HMGCS2-203ENST00000476640 MARCH10Q8NA82 808 aaPredicted RBP18.84■□□□□ 0.61
HMGCS2-203ENST00000476640 TNS2Q63HR2 1409 aa18.83■□□□□ 0.6
HMGCS2-203ENST00000476640 ERBB3P21860 1342 aa18.82■□□□□ 0.6
HMGCS2-203ENST00000476640 NLRP2Q9NX02 1062 aa18.82■□□□□ 0.6
HMGCS2-203ENST00000476640 NHSQ6T4R5 1651 aa18.81■□□□□ 0.6
HMGCS2-203ENST00000476640 ST20-MTHFSA0A0A6YYL1 179 aa18.8■□□□□ 0.6
HMGCS2-203ENST00000476640 TESK2Q96S53 571 aa18.79■□□□□ 0.6
HMGCS2-203ENST00000476640 SPON1Q9HCB6 807 aa18.79■□□□□ 0.6
HMGCS2-203ENST00000476640 IL2RBP14784 551 aa18.78■□□□□ 0.6
HMGCS2-203ENST00000476640 ANKRD24Q8TF21 1146 aa18.78■□□□□ 0.6
HMGCS2-203ENST00000476640 COG3Q96JB2 828 aa18.77■□□□□ 0.6
HMGCS2-203ENST00000476640 PPP1R1BQ9UD71 204 aaPredicted RBP18.76■□□□□ 0.59
HMGCS2-203ENST00000476640 CASZ1Q86V15 1759 aa18.76■□□□□ 0.59
HMGCS2-203ENST00000476640 KCNQ2O43526 872 aa18.75■□□□□ 0.59
HMGCS2-203ENST00000476640 IP6K1Q92551 441 aa18.75■□□□□ 0.59
HMGCS2-203ENST00000476640 BTAF1O14981 1849 aa18.74■□□□□ 0.59
HMGCS2-203ENST00000476640 ANKRD36BQ8N2N9 1353 aa18.74■□□□□ 0.59
HMGCS2-203ENST00000476640 TMF1P82094 1093 aa18.74■□□□□ 0.59
HMGCS2-203ENST00000476640 PTF1AQ7RTS3 328 aa18.74■□□□□ 0.59
HMGCS2-203ENST00000476640 KIF20BQ96Q89 1820 aa18.73■□□□□ 0.59
HMGCS2-203ENST00000476640 CDCA8Q53HL2 280 aa18.73■□□□□ 0.59
HMGCS2-203ENST00000476640 USP47Q96K76 1375 aa18.72■□□□□ 0.59
HMGCS2-203ENST00000476640 TXNRD1Q16881 649 aa18.72■□□□□ 0.59
HMGCS2-203ENST00000476640 STK32BQ9NY57 414 aa18.72■□□□□ 0.59
HMGCS2-203ENST00000476640 RGPD2P0DJD1 1756 aa18.71■□□□□ 0.59
HMGCS2-203ENST00000476640 DCAF8L1A6NGE4 600 aa18.71■□□□□ 0.59
HMGCS2-203ENST00000476640 AMPHP49418 695 aa18.71■□□□□ 0.59
HMGCS2-203ENST00000476640 PROM2Q8N271 834 aa18.71■□□□□ 0.59
HMGCS2-203ENST00000476640 ANO8Q9HCE9 1232 aaPredicted RBP18.71■□□□□ 0.59
HMGCS2-203ENST00000476640 LTV1Q96GA3 475 aaPredicted RBP18.69■□□□□ 0.58
HMGCS2-203ENST00000476640 RTL1A6NKG5 1358 aa18.68■□□□□ 0.58
HMGCS2-203ENST00000476640 ACSBG1Q96GR2 724 aa18.68■□□□□ 0.58
HMGCS2-203ENST00000476640 TIMELESSQ9UNS1 1208 aa18.68■□□□□ 0.58
HMGCS2-203ENST00000476640 MAP3K19Q56UN5 1328 aa18.68■□□□□ 0.58
HMGCS2-203ENST00000476640 HOXC9P31274 260 aa18.67■□□□□ 0.58
HMGCS2-203ENST00000476640 SLC15A2Q16348 729 aa18.67■□□□□ 0.58
HMGCS2-203ENST00000476640 SMG6Q86US8 1419 aaKnown RBP18.66■□□□□ 0.58
HMGCS2-203ENST00000476640 DOT1LQ8TEK3 1739 aa18.64■□□□□ 0.57
HMGCS2-203ENST00000476640 DDX54Q8TDD1 881 aaKnown RBP18.64■□□□□ 0.57
HMGCS2-203ENST00000476640 CLSPNQ9HAW4 1339 aa18.64■□□□□ 0.57
HMGCS2-203ENST00000476640 PAPPAQ13219 1627 aa18.63■□□□□ 0.57
HMGCS2-203ENST00000476640 MYOM1P52179 1685 aa18.63■□□□□ 0.57
HMGCS2-203ENST00000476640 SHANK3Q9BYB0 1731 aa18.63■□□□□ 0.57
HMGCS2-203ENST00000476640 FYB1O15117 783 aa18.63■□□□□ 0.57
HMGCS2-203ENST00000476640 QSER1Q2KHR3 1735 aa18.63■□□□□ 0.57
HMGCS2-203ENST00000476640 ZBTB7AO95365 584 aa18.62■□□□□ 0.57
HMGCS2-203ENST00000476640 GGNBP2Q9H3C7 697 aa18.62■□□□□ 0.57
HMGCS2-203ENST00000476640 CGNL1Q0VF96 1302 aa18.62■□□□□ 0.57
HMGCS2-203ENST00000476640 KIF24Q5T7B8 1368 aa18.61■□□□□ 0.57
HMGCS2-203ENST00000476640 ZCRB1Q8TBF4 217 aaKnown RBP18.61■□□□□ 0.57
HMGCS2-203ENST00000476640 RRS1Q15050 365 aaKnown RBP18.6■□□□□ 0.57
HMGCS2-203ENST00000476640 SLC27A3Q5K4L6 730 aa18.6■□□□□ 0.57
HMGCS2-203ENST00000476640 MTFR1LQ9H019 292 aa18.6■□□□□ 0.57
HMGCS2-203ENST00000476640 LY75O60449 1722 aa18.6■□□□□ 0.57
HMGCS2-203ENST00000476640 FBLN1P23142 703 aa18.59■□□□□ 0.57
HMGCS2-203ENST00000476640 RAPGEF4Q8WZA2 1011 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms