RNA–Protein interactions for RNA: ENST00000475996.1

HLA-F-224, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 1,505 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-224ENST00000475996 CFAP53Q96M91 514 aa17.21■□□□□ 0.34
HLA-F-224ENST00000475996 RGPD5Q99666 1765 aa17.2■□□□□ 0.34
HLA-F-224ENST00000475996 IP6K1Q92551 441 aa17.2■□□□□ 0.34
HLA-F-224ENST00000475996 RTL1A6NKG5 1358 aa17.2■□□□□ 0.34
HLA-F-224ENST00000475996 COL18A1P39060 1754 aa17.19■□□□□ 0.34
HLA-F-224ENST00000475996 SPATA31A6Q5VVP1 1343 aa17.19■□□□□ 0.34
HLA-F-224ENST00000475996 AXIN2Q9Y2T1 843 aa17.19■□□□□ 0.34
HLA-F-224ENST00000475996 COL3A1P02461 1466 aaPredicted RBP17.19■□□□□ 0.34
HLA-F-224ENST00000475996 FAM83GA6ND36 823 aa17.18■□□□□ 0.34
HLA-F-224ENST00000475996 LTV1Q96GA3 475 aaPredicted RBP17.18■□□□□ 0.34
HLA-F-224ENST00000475996 LRP6O75581 1613 aa17.18■□□□□ 0.34
HLA-F-224ENST00000475996 KIF24Q5T7B8 1368 aa17.18■□□□□ 0.34
HLA-F-224ENST00000475996 INSRP06213 1382 aa17.16■□□□□ 0.34
HLA-F-224ENST00000475996 DIAPH1O60610 1272 aaKnown RBP17.16■□□□□ 0.34
HLA-F-224ENST00000475996 EIF4A2Q14240 407 aaKnown RBP17.16■□□□□ 0.34
HLA-F-224ENST00000475996 COL14A1Q05707 1796 aaKnown RBP17.15■□□□□ 0.34
HLA-F-224ENST00000475996 LMO7Q8WWI1 1683 aa17.15■□□□□ 0.34
HLA-F-224ENST00000475996 ANKRD24Q8TF21 1146 aa17.15■□□□□ 0.34
HLA-F-224ENST00000475996 BLMP54132 1417 aaPredicted RBP17.15■□□□□ 0.34
HLA-F-224ENST00000475996 ABCC6O95255 1503 aa17.14■□□□□ 0.33
HLA-F-224ENST00000475996 IL13P35225 146 aa17.14■□□□□ 0.33
HLA-F-224ENST00000475996 MEX3CQ5U5Q3 659 aaKnown RBP17.14■□□□□ 0.33
HLA-F-224ENST00000475996 CAMTA1Q9Y6Y1 1673 aa17.14■□□□□ 0.33
HLA-F-224ENST00000475996 U2SURPO15042 1029 aaKnown RBP17.13■□□□□ 0.33
HLA-F-224ENST00000475996 FAM9BQ8IZU0 186 aa17.13■□□□□ 0.33
HLA-F-224ENST00000475996 C8orf37Q96NL8 207 aa17.13■□□□□ 0.33
HLA-F-224ENST00000475996 PLCH1Q4KWH8 1693 aa17.13■□□□□ 0.33
HLA-F-224ENST00000475996 WDR43Q15061 677 aaKnown RBP eCLIP17.12■□□□□ 0.33
HLA-F-224ENST00000475996 BTG4Q9NY30 223 aa17.12■□□□□ 0.33
HLA-F-224ENST00000475996 RGPD2P0DJD1 1756 aa17.12■□□□□ 0.33
HLA-F-224ENST00000475996 PNISRQ8TF01 805 aaKnown RBP17.11■□□□□ 0.33
HLA-F-224ENST00000475996 STRN4Q9NRL3 753 aa17.11■□□□□ 0.33
HLA-F-224ENST00000475996 NUDCQ9Y266 331 aa17.11■□□□□ 0.33
HLA-F-224ENST00000475996 COL5A2P05997 1499 aaPredicted RBP17.11■□□□□ 0.33
HLA-F-224ENST00000475996 CSB-PGBD3P0DP91 1061 aa17.11■□□□□ 0.33
HLA-F-224ENST00000475996 NGLY1Q96IV0 654 aa17.11■□□□□ 0.33
HLA-F-224ENST00000475996 ERBB3P21860 1342 aa17.1■□□□□ 0.33
HLA-F-224ENST00000475996 U2AF1L5P0DN76 240 aaPredicted RBP17.1■□□□□ 0.33
HLA-F-224ENST00000475996 EVA1CP58658 441 aa17.1■□□□□ 0.33
HLA-F-224ENST00000475996 U2AF1Q01081 240 aaKnown RBP eCLIP17.1■□□□□ 0.33
HLA-F-224ENST00000475996 USHBP1Q8N6Y0 703 aa17.09■□□□□ 0.33
HLA-F-224ENST00000475996 EYA1Q99502 592 aa17.09■□□□□ 0.33
HLA-F-224ENST00000475996 ADAMTS8Q9UP79 889 aa17.08■□□□□ 0.32
HLA-F-224ENST00000475996 SLIT2O94813 1529 aa17.08■□□□□ 0.32
HLA-F-224ENST00000475996 RGPD1P0DJD0 1748 aa17.07■□□□□ 0.32
HLA-F-224ENST00000475996 NRAPQ86VF7 1730 aa17.07■□□□□ 0.32
HLA-F-224ENST00000475996 HMOX1P09601 288 aa17.07■□□□□ 0.32
HLA-F-224ENST00000475996 NBPF6Q5VWK0 638 aa17.07■□□□□ 0.32
HLA-F-224ENST00000475996 LARP1Q6PKG0 1096 aaKnown RBP17.07■□□□□ 0.32
HLA-F-224ENST00000475996 NBPF4Q96M43 638 aa17.07■□□□□ 0.32
HLA-F-224ENST00000475996 NLRP2Q9NX02 1062 aa17.07■□□□□ 0.32
HLA-F-224ENST00000475996 NWD2Q9ULI1 1742 aa17.07■□□□□ 0.32
HLA-F-224ENST00000475996 ILDR1Q86SU0 546 aaPredicted RBP17.06■□□□□ 0.32
HLA-F-224ENST00000475996 WDR17Q8IZU2 1322 aa17.06■□□□□ 0.32
HLA-F-224ENST00000475996 SULT6B1Q6IMI4 303 aa17.06■□□□□ 0.32
HLA-F-224ENST00000475996 TOM1L2Q6ZVM7 507 aa17.06■□□□□ 0.32
HLA-F-224ENST00000475996 AEBP1Q8IUX7 1158 aa17.06■□□□□ 0.32
HLA-F-224ENST00000475996 IGSF1Q8N6C5 1336 aa17.06■□□□□ 0.32
HLA-F-224ENST00000475996 FAM208AQ9UK61 1670 aaKnown RBP17.06■□□□□ 0.32
HLA-F-224ENST00000475996 AFF2P51816 1311 aa17.05■□□□□ 0.32
HLA-F-224ENST00000475996 FNBP4Q8N3X1 1017 aaPredicted RBP17.04■□□□□ 0.32
HLA-F-224ENST00000475996 UNC5CLQ8IV45 518 aa17.03■□□□□ 0.32
HLA-F-224ENST00000475996 CCDC146Q8IYE0 955 aa17.03■□□□□ 0.32
HLA-F-224ENST00000475996 USP21Q9UK80 565 aa17.03■□□□□ 0.32
HLA-F-224ENST00000475996 BCL9LQ86UU0 1499 aa17.03■□□□□ 0.32
HLA-F-224ENST00000475996 RSPH6AQ9H0K4 717 aa17.02■□□□□ 0.32
HLA-F-224ENST00000475996 USP35Q9P2H5 1018 aa17.02■□□□□ 0.32
HLA-F-224ENST00000475996 CARD10Q9BWT7 1032 aa17.01■□□□□ 0.31
HLA-F-224ENST00000475996 CCDC9Q9Y3X0 531 aaKnown RBP17.01■□□□□ 0.31
HLA-F-224ENST00000475996 CRB1P82279 1406 aa17.01■□□□□ 0.31
HLA-F-224ENST00000475996 SENP3-EIF4A1A0A087X0R7 540 aa17.01■□□□□ 0.31
HLA-F-224ENST00000475996 PRKAR2BP31323 418 aa17.01■□□□□ 0.31
HLA-F-224ENST00000475996 NCAPD2Q15021 1401 aa17■□□□□ 0.31
HLA-F-224ENST00000475996 FCHSD2O94868 740 aa17■□□□□ 0.31
HLA-F-224ENST00000475996 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.99■□□□□ 0.31
HLA-F-224ENST00000475996 KDRP35968 1356 aa16.99■□□□□ 0.31
HLA-F-224ENST00000475996 PLEKHF1Q96S99 279 aa16.98■□□□□ 0.31
HLA-F-224ENST00000475996 VPS72Q15906 364 aa16.97■□□□□ 0.31
HLA-F-224ENST00000475996 RUNDC1Q96C34 613 aa16.97■□□□□ 0.31
HLA-F-224ENST00000475996 SPATA31A1Q5TZJ5 1347 aa16.97■□□□□ 0.31
HLA-F-224ENST00000475996 SPATA31A5Q5VU36 1347 aa16.97■□□□□ 0.31
HLA-F-224ENST00000475996 SPATA31A7Q8IWB4 1347 aa16.97■□□□□ 0.31
HLA-F-224ENST00000475996 ADRA2BP18089 450 aa16.96■□□□□ 0.31
HLA-F-224ENST00000475996 RAPGEF4Q8WZA2 1011 aa16.96■□□□□ 0.31
HLA-F-224ENST00000475996 PNNQ9H307 717 aaKnown RBP16.96■□□□□ 0.31
HLA-F-224ENST00000475996 MAPK8IP3Q9UPT6 1336 aa16.96■□□□□ 0.31
HLA-F-224ENST00000475996 MEGF6O75095 1541 aa16.96■□□□□ 0.31
HLA-F-224ENST00000475996 PHACTR3Q96KR7 559 aa16.96■□□□□ 0.3
HLA-F-224ENST00000475996 NEFMP07197 916 aa16.95■□□□□ 0.3
HLA-F-224ENST00000475996 TATP17735 454 aaPredicted RBP16.95■□□□□ 0.3
HLA-F-224ENST00000475996 TCP11L2Q8N4U5 519 aa16.95■□□□□ 0.3
HLA-F-224ENST00000475996 YTHDC1Q96MU7 727 aaKnown RBP16.95■□□□□ 0.3
HLA-F-224ENST00000475996 ATRNO75882 1429 aa16.94■□□□□ 0.3
HLA-F-224ENST00000475996 APAF1O14727 1248 aa16.94■□□□□ 0.3
HLA-F-224ENST00000475996 TRPC5Q9UL62 973 aaPredicted RBP16.94■□□□□ 0.3
HLA-F-224ENST00000475996 IL2RBP14784 551 aa16.93■□□□□ 0.3
HLA-F-224ENST00000475996 QTRT2Q9H974 415 aaKnown RBP16.93■□□□□ 0.3
HLA-F-224ENST00000475996 RRP7AQ9Y3A4 280 aaKnown RBP16.93■□□□□ 0.3
HLA-F-224ENST00000475996 SALL2Q9Y467 1007 aaPredicted RBP16.93■□□□□ 0.3
HLA-F-224ENST00000475996 WNK3Q9BYP7 1800 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms