RNA–Protein interactions for RNA: ENST00000475875.1

CSNK2B-207, Transcript of casein kinase 2 beta, humanhuman

TSL 1 (best)

Gene CSNK2B, Length 590 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2B-207ENST00000475875 CDCA7Q9BWT1 371 aaPredicted RBP21.5■■□□□ 1.03
CSNK2B-207ENST00000475875 ACEP12821 1306 aa21.5■■□□□ 1.03
CSNK2B-207ENST00000475875 PTF1AQ7RTS3 328 aa21.49■■□□□ 1.03
CSNK2B-207ENST00000475875 NLRP13Q86W25 1043 aa21.49■■□□□ 1.03
CSNK2B-207ENST00000475875 PLEKHG3A1L390 1219 aa21.48■■□□□ 1.03
CSNK2B-207ENST00000475875 GPR162Q16538 588 aa21.48■■□□□ 1.03
CSNK2B-207ENST00000475875 CCDC61Q9Y6R9 512 aa21.48■■□□□ 1.03
CSNK2B-207ENST00000475875 GOLGB1Q14789 3259 aaKnown RBP21.47■■□□□ 1.03
CSNK2B-207ENST00000475875 MARCH10Q8NA82 808 aaPredicted RBP21.46■■□□□ 1.03
CSNK2B-207ENST00000475875 BRD4O60885 1362 aaPredicted RBP21.44■■□□□ 1.02
CSNK2B-207ENST00000475875 TOPAZ1Q8N9V7 1692 aa21.44■■□□□ 1.02
CSNK2B-207ENST00000475875 TOM1L2Q6ZVM7 507 aa21.43■■□□□ 1.02
CSNK2B-207ENST00000475875 STAC3Q96MF2 364 aa21.43■■□□□ 1.02
CSNK2B-207ENST00000475875 CDK19Q9BWU1 502 aa21.42■■□□□ 1.02
CSNK2B-207ENST00000475875 WDR17Q8IZU2 1322 aa21.4■■□□□ 1.02
CSNK2B-207ENST00000475875 SHANK3Q9BYB0 1731 aa21.4■■□□□ 1.02
CSNK2B-207ENST00000475875 AKAP12Q02952 1782 aa21.39■■□□□ 1.01
CSNK2B-207ENST00000475875 ARHGEF28Q8N1W1 1705 aaKnown RBP21.38■■□□□ 1.01
CSNK2B-207ENST00000475875 SLC16A10Q8TF71 515 aa21.38■■□□□ 1.01
CSNK2B-207ENST00000475875 WNK3Q9BYP7 1800 aa21.38■■□□□ 1.01
CSNK2B-207ENST00000475875 PAPPAQ13219 1627 aa21.37■■□□□ 1.01
CSNK2B-207ENST00000475875 SLIT3O75094 1523 aa21.35■■□□□ 1.01
CSNK2B-207ENST00000475875 EXOC5O00471 708 aa21.35■■□□□ 1.01
CSNK2B-207ENST00000475875 CARD10Q9BWT7 1032 aa21.35■■□□□ 1.01
CSNK2B-207ENST00000475875 GRIN3BO60391 1043 aa21.34■■□□□ 1.01
CSNK2B-207ENST00000475875 POLD1P28340 1107 aa21.34■■□□□ 1.01
CSNK2B-207ENST00000475875 ZBTB7CA1YPR0 619 aa21.32■■□□□ 1
CSNK2B-207ENST00000475875 NHSQ6T4R5 1651 aa21.31■■□□□ 1
CSNK2B-207ENST00000475875 TNS2Q63HR2 1409 aa21.31■■□□□ 1
CSNK2B-207ENST00000475875 COL18A1P39060 1754 aa21.31■■□□□ 1
CSNK2B-207ENST00000475875 HSPA6P17066 643 aa21.31■■□□□ 1
CSNK2B-207ENST00000475875 NLRP6P59044 892 aa21.3■■□□□ 1
CSNK2B-207ENST00000475875 DCAF11Q8TEB1 546 aa21.3■■□□□ 1
CSNK2B-207ENST00000475875 AXIN2Q9Y2T1 843 aa21.3■■□□□ 1
CSNK2B-207ENST00000475875 CCDC7Q96M83 1385 aa21.29■■□□□ 1
CSNK2B-207ENST00000475875 PELP1Q8IZL8 1130 aaKnown RBP21.29■■□□□ 1
CSNK2B-207ENST00000475875 KDM2AQ9Y2K7 1162 aa21.29■■□□□ 1
CSNK2B-207ENST00000475875 CPSF1Q10570 1443 aaKnown RBP21.29■■□□□ 1
CSNK2B-207ENST00000475875 PPIP5K1Q6PFW1 1433 aa21.29■■□□□ 1
CSNK2B-207ENST00000475875 ZNF827Q17R98 1081 aa21.28■■□□□ 1
CSNK2B-207ENST00000475875 COL24A1Q17RW2 1714 aa21.28■■□□□ 1
CSNK2B-207ENST00000475875 KLHL34Q8N239 644 aa21.27■■□□□ 1
CSNK2B-207ENST00000475875 USP6P35125 1406 aa21.27■■□□□ 1
CSNK2B-207ENST00000475875 ATP10DQ9P241 1426 aa21.27■■□□□ 1
CSNK2B-207ENST00000475875 ARHGEF25Q86VW2 580 aa21.26■□□□□ 0.99
CSNK2B-207ENST00000475875 CSB-PGBD3P0DP91 1061 aa21.25■□□□□ 0.99
CSNK2B-207ENST00000475875 QSER1Q2KHR3 1735 aa21.25■□□□□ 0.99
CSNK2B-207ENST00000475875 AKT1S1Q96B36 256 aa21.25■□□□□ 0.99
CSNK2B-207ENST00000475875 TRPM1Q7Z4N2 1603 aa21.25■□□□□ 0.99
CSNK2B-207ENST00000475875 ABCC6O95255 1503 aa21.24■□□□□ 0.99
CSNK2B-207ENST00000475875 KCNH5Q8NCM2 988 aa21.24■□□□□ 0.99
CSNK2B-207ENST00000475875 NLGN2Q8NFZ4 835 aa21.24■□□□□ 0.99
CSNK2B-207ENST00000475875 GPBP1L1Q9HC44 474 aaPredicted RBP21.24■□□□□ 0.99
CSNK2B-207ENST00000475875 SLC27A3Q5K4L6 730 aa21.23■□□□□ 0.99
CSNK2B-207ENST00000475875 LRRC4BQ9NT99 713 aa21.23■□□□□ 0.99
CSNK2B-207ENST00000475875 YBX3P16989 372 aaKnown RBP eCLIP21.22■□□□□ 0.99
CSNK2B-207ENST00000475875 SRPK2P78362 688 aaKnown RBP21.22■□□□□ 0.99
CSNK2B-207ENST00000475875 ACSBG1Q96GR2 724 aa21.21■□□□□ 0.99
CSNK2B-207ENST00000475875 PNPLA7Q6ZV29 1317 aa21.2■□□□□ 0.98
CSNK2B-207ENST00000475875 ADCY9O60503 1353 aa21.19■□□□□ 0.98
CSNK2B-207ENST00000475875 PIK3C2AO00443 1686 aa21.18■□□□□ 0.98
CSNK2B-207ENST00000475875 BTAF1O14981 1849 aa21.18■□□□□ 0.98
CSNK2B-207ENST00000475875 CABP2Q9NPB3 220 aa21.16■□□□□ 0.98
CSNK2B-207ENST00000475875 CABP1Q9NZU7 370 aa21.16■□□□□ 0.98
CSNK2B-207ENST00000475875 TFCP2L1Q9NZI6 479 aa21.15■□□□□ 0.98
CSNK2B-207ENST00000475875 QRICH2Q9H0J4 1663 aa21.14■□□□□ 0.97
CSNK2B-207ENST00000475875 KIAA1210Q9ULL0 1709 aa21.13■□□□□ 0.97
CSNK2B-207ENST00000475875 IL2RBP14784 551 aa21.13■□□□□ 0.97
CSNK2B-207ENST00000475875 RGPD5Q99666 1765 aa21.13■□□□□ 0.97
CSNK2B-207ENST00000475875 CENPJQ9HC77 1338 aaPredicted RBP21.12■□□□□ 0.97
CSNK2B-207ENST00000475875 NFAT5O94916 1531 aa21.11■□□□□ 0.97
CSNK2B-207ENST00000475875 APLP1P51693 650 aa21.11■□□□□ 0.97
CSNK2B-207ENST00000475875 ZNF692Q9BU19 519 aaPredicted RBP21.11■□□□□ 0.97
CSNK2B-207ENST00000475875 ERBB3P21860 1342 aa21.1■□□□□ 0.97
CSNK2B-207ENST00000475875 TTC21BQ7Z4L5 1316 aa21.1■□□□□ 0.97
CSNK2B-207ENST00000475875 TTC21AQ8NDW8 1320 aa21.1■□□□□ 0.97
CSNK2B-207ENST00000475875 CD2APQ9Y5K6 639 aa21.1■□□□□ 0.97
CSNK2B-207ENST00000475875 NLRP2Q9NX02 1062 aa21.07■□□□□ 0.96
CSNK2B-207ENST00000475875 SOX12O15370 315 aa21.06■□□□□ 0.96
CSNK2B-207ENST00000475875 TUBGCP6Q96RT7 1819 aa21.06■□□□□ 0.96
CSNK2B-207ENST00000475875 ZNF526Q8TF50 670 aaPredicted RBP21.05■□□□□ 0.96
CSNK2B-207ENST00000475875 KIF3CO14782 793 aa21.04■□□□□ 0.96
CSNK2B-207ENST00000475875 DNAJC5GQ8N7S2 189 aa21.04■□□□□ 0.96
CSNK2B-207ENST00000475875 KAT6BQ8WYB5 2073 aa21.03■□□□□ 0.96
CSNK2B-207ENST00000475875 HMGB2P26583 209 aaKnown RBP21.02■□□□□ 0.96
CSNK2B-207ENST00000475875 ANKRD36BQ8N2N9 1353 aa21.01■□□□□ 0.95
CSNK2B-207ENST00000475875 RAB3GAP2Q9H2M9 1393 aa21.01■□□□□ 0.95
CSNK2B-207ENST00000475875 NBPF1Q3BBV0 1214 aa21.01■□□□□ 0.95
CSNK2B-207ENST00000475875 COL23A1Q86Y22 540 aaPredicted RBP21.01■□□□□ 0.95
CSNK2B-207ENST00000475875 EVC2Q86UK5 1308 aa21.01■□□□□ 0.95
CSNK2B-207ENST00000475875 LY75O60449 1722 aa21■□□□□ 0.95
CSNK2B-207ENST00000475875 MSH5O43196 834 aa20.99■□□□□ 0.95
CSNK2B-207ENST00000475875 USP31Q70CQ4 1352 aa20.98■□□□□ 0.95
CSNK2B-207ENST00000475875 KCNQ4P56696 695 aa20.98■□□□□ 0.95
CSNK2B-207ENST00000475875 CCNL1Q9UK58 526 aaPredicted RBP20.98■□□□□ 0.95
CSNK2B-207ENST00000475875 TOMM70O94826 608 aa20.97■□□□□ 0.95
CSNK2B-207ENST00000475875 FLAD1Q8NFF5 587 aa20.97■□□□□ 0.95
CSNK2B-207ENST00000475875 ANKRD24Q8TF21 1146 aa20.97■□□□□ 0.95
CSNK2B-207ENST00000475875 PRIM1P49642 420 aaKnown RBP20.96■□□□□ 0.95
CSNK2B-207ENST00000475875 DDX54Q8TDD1 881 aaKnown RBP20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms