RNA–Protein interactions for RNA: ENST00000475664.1

MCF2L2-209, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 3

Gene MCF2L2, Length 460 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-209ENST00000475664 POLKQ9UBT6 870 aa30.12■■■□□ 2.41
MCF2L2-209ENST00000475664 EMILIN1Q9Y6C2 1016 aa30.12■■■□□ 2.41
MCF2L2-209ENST00000475664 KIF24Q5T7B8 1368 aa30.12■■■□□ 2.41
MCF2L2-209ENST00000475664 AFF2P51816 1311 aa30.1■■■□□ 2.41
MCF2L2-209ENST00000475664 BCL9LQ86UU0 1499 aa30.1■■■□□ 2.41
MCF2L2-209ENST00000475664 IP6K1Q92551 441 aa30.09■■■□□ 2.41
MCF2L2-209ENST00000475664 BTG4Q9NY30 223 aa30.09■■■□□ 2.41
MCF2L2-209ENST00000475664 AXIN2Q9Y2T1 843 aa30.09■■■□□ 2.41
MCF2L2-209ENST00000475664 BLMP54132 1417 aaPredicted RBP30.08■■■□□ 2.41
MCF2L2-209ENST00000475664 FLT4P35916 1363 aa30.08■■■□□ 2.41
MCF2L2-209ENST00000475664 HOXC9P31274 260 aa30.08■■■□□ 2.41
MCF2L2-209ENST00000475664 AMPHP49418 695 aa30.08■■■□□ 2.41
MCF2L2-209ENST00000475664 COL5A2P05997 1499 aaPredicted RBP30.07■■■□□ 2.4
MCF2L2-209ENST00000475664 CDK12Q9NYV4 1490 aaPredicted RBP30.06■■■□□ 2.4
MCF2L2-209ENST00000475664 RALBP1Q15311 655 aa30.06■■■□□ 2.4
MCF2L2-209ENST00000475664 USP21Q9UK80 565 aa30.05■■■□□ 2.4
MCF2L2-209ENST00000475664 PPP2R1AP30153 589 aa30.04■■■□□ 2.4
MCF2L2-209ENST00000475664 PRKRIP1Q9H875 184 aaPredicted RBP30.04■■■□□ 2.4
MCF2L2-209ENST00000475664 PPM1GO15355 546 aaPredicted RBP30.03■■■□□ 2.4
MCF2L2-209ENST00000475664 UNC5CLQ8IV45 518 aa30.03■■■□□ 2.4
MCF2L2-209ENST00000475664 INSRP06213 1382 aa30.03■■■□□ 2.4
MCF2L2-209ENST00000475664 MTHFSP49914 203 aa30.01■■■□□ 2.39
MCF2L2-209ENST00000475664 HSP90AB2PQ58FF8 381 aa30■■■□□ 2.39
MCF2L2-209ENST00000475664 FAM208AQ9UK61 1670 aaKnown RBP30■■■□□ 2.39
MCF2L2-209ENST00000475664 ERBB3P21860 1342 aa29.99■■■□□ 2.39
MCF2L2-209ENST00000475664 PHF23Q9BUL5 403 aaPredicted RBP29.99■■■□□ 2.39
MCF2L2-209ENST00000475664 RGS17Q9UGC6 210 aaPredicted RBP29.99■■■□□ 2.39
MCF2L2-209ENST00000475664 ATRNO75882 1429 aa29.98■■■□□ 2.39
MCF2L2-209ENST00000475664 ZNF772Q68DY9 489 aaPredicted RBP29.98■■■□□ 2.39
MCF2L2-209ENST00000475664 STRN4Q9NRL3 753 aa29.98■■■□□ 2.39
MCF2L2-209ENST00000475664 ANKRD24Q8TF21 1146 aa29.97■■■□□ 2.39
MCF2L2-209ENST00000475664 WDR17Q8IZU2 1322 aa29.96■■■□□ 2.39
MCF2L2-209ENST00000475664 EVA1CP58658 441 aa29.96■■■□□ 2.39
MCF2L2-209ENST00000475664 MYBBP1AQ9BQG0 1328 aaKnown RBP29.96■■■□□ 2.39
MCF2L2-209ENST00000475664 RGPD2P0DJD1 1756 aa29.95■■■□□ 2.39
MCF2L2-209ENST00000475664 COL3A1P02461 1466 aaPredicted RBP29.95■■■□□ 2.39
MCF2L2-209ENST00000475664 VPS72Q15906 364 aa29.95■■■□□ 2.39
MCF2L2-209ENST00000475664 ANP32CO43423 234 aa29.94■■■□□ 2.38
MCF2L2-209ENST00000475664 LARP1Q6PKG0 1096 aaKnown RBP29.94■■■□□ 2.38
MCF2L2-209ENST00000475664 LTV1Q96GA3 475 aaPredicted RBP29.93■■■□□ 2.38
MCF2L2-209ENST00000475664 TRPC5Q9UL62 973 aaPredicted RBP29.93■■■□□ 2.38
MCF2L2-209ENST00000475664 CRB1P82279 1406 aa29.93■■■□□ 2.38
MCF2L2-209ENST00000475664 CSB-PGBD3P0DP91 1061 aa29.91■■■□□ 2.38
MCF2L2-209ENST00000475664 GLI3P10071 1580 aa29.9■■■□□ 2.38
MCF2L2-209ENST00000475664 EIF4A2Q14240 407 aaKnown RBP29.9■■■□□ 2.38
MCF2L2-209ENST00000475664 QTRT2Q9H974 415 aaKnown RBP29.9■■■□□ 2.38
MCF2L2-209ENST00000475664 SPATA31A5Q5VU36 1347 aa29.9■■■□□ 2.38
MCF2L2-209ENST00000475664 SPATA31A7Q8IWB4 1347 aa29.9■■■□□ 2.38
MCF2L2-209ENST00000475664 DIEXFQ68CQ4 756 aaKnown RBP29.88■■■□□ 2.37
MCF2L2-209ENST00000475664 TOM1L2Q6ZVM7 507 aa29.88■■■□□ 2.37
MCF2L2-209ENST00000475664 SPATA31A1Q5TZJ5 1347 aa29.88■■■□□ 2.37
MCF2L2-209ENST00000475664 RGPD1P0DJD0 1748 aa29.88■■■□□ 2.37
MCF2L2-209ENST00000475664 POTEAQ6S8J7 498 aa29.87■■■□□ 2.37
MCF2L2-209ENST00000475664 GJD4Q96KN9 370 aaPredicted RBP29.86■■■□□ 2.37
MCF2L2-209ENST00000475664 CFAP53Q96M91 514 aa29.86■■■□□ 2.37
MCF2L2-209ENST00000475664 CARD10Q9BWT7 1032 aa29.86■■■□□ 2.37
MCF2L2-209ENST00000475664 CCDC9Q9Y3X0 531 aaKnown RBP29.86■■■□□ 2.37
MCF2L2-209ENST00000475664 WNK3Q9BYP7 1800 aa29.85■■■□□ 2.37
MCF2L2-209ENST00000475664 NLRP2Q9NX02 1062 aa29.85■■■□□ 2.37
MCF2L2-209ENST00000475664 IL13P35225 146 aa29.84■■■□□ 2.37
MCF2L2-209ENST00000475664 NCAPD2Q15021 1401 aa29.83■■■□□ 2.37
MCF2L2-209ENST00000475664 NBPF6Q5VWK0 638 aa29.83■■■□□ 2.37
MCF2L2-209ENST00000475664 NBPF4Q96M43 638 aa29.83■■■□□ 2.37
MCF2L2-209ENST00000475664 DIAPH1O60610 1272 aaKnown RBP29.82■■■□□ 2.36
MCF2L2-209ENST00000475664 USP35Q9P2H5 1018 aa29.81■■■□□ 2.36
MCF2L2-209ENST00000475664 RBM6P78332 1123 aaKnown RBP29.8■■■□□ 2.36
MCF2L2-209ENST00000475664 TCP11L2Q8N4U5 519 aa29.8■■■□□ 2.36
MCF2L2-209ENST00000475664 EYA1Q99502 592 aa29.8■■■□□ 2.36
MCF2L2-209ENST00000475664 IGSF1Q8N6C5 1336 aa29.79■■■□□ 2.36
MCF2L2-209ENST00000475664 THRAP3Q9Y2W1 955 aaKnown RBP29.79■■■□□ 2.36
MCF2L2-209ENST00000475664 THSD7AQ9UPZ6 1657 aa29.78■■■□□ 2.36
MCF2L2-209ENST00000475664 BARGINQ6ZT62 677 aa29.77■■■□□ 2.36
MCF2L2-209ENST00000475664 RXRBP28702 533 aa29.76■■■□□ 2.35
MCF2L2-209ENST00000475664 USHBP1Q8N6Y0 703 aa29.76■■■□□ 2.35
MCF2L2-209ENST00000475664 DISP2A7MBM2 1401 aa29.76■■■□□ 2.35
MCF2L2-209ENST00000475664 PARP4Q9UKK3 1724 aaKnown RBP29.74■■■□□ 2.35
MCF2L2-209ENST00000475664 FAM98CQ17RN3 349 aaKnown RBP29.73■■■□□ 2.35
MCF2L2-209ENST00000475664 ONECUT3O60422 494 aaPredicted RBP29.72■■■□□ 2.35
MCF2L2-209ENST00000475664 KDRP35968 1356 aa29.72■■■□□ 2.35
MCF2L2-209ENST00000475664 CCDC184Q52MB2 194 aa29.71■■■□□ 2.35
MCF2L2-209ENST00000475664 NUDCQ9Y266 331 aa29.71■■■□□ 2.35
MCF2L2-209ENST00000475664 MEGF6O75095 1541 aa29.71■■■□□ 2.35
MCF2L2-209ENST00000475664 U2SURPO15042 1029 aaKnown RBP29.7■■■□□ 2.35
MCF2L2-209ENST00000475664 LRRC37A3O60309 1634 aa29.7■■■□□ 2.34
MCF2L2-209ENST00000475664 AEBP1Q8IUX7 1158 aa29.69■■■□□ 2.34
MCF2L2-209ENST00000475664 RGS12O14924 1447 aa29.69■■■□□ 2.34
MCF2L2-209ENST00000475664 IL2RBP14784 551 aa29.68■■■□□ 2.34
MCF2L2-209ENST00000475664 CDCA7Q9BWT1 371 aaPredicted RBP29.68■■■□□ 2.34
MCF2L2-209ENST00000475664 SULT6B1Q6IMI4 303 aa29.67■■■□□ 2.34
MCF2L2-209ENST00000475664 OVOS2A0A0G2JMS6 1433 aa29.66■■■□□ 2.34
MCF2L2-209ENST00000475664 BRWD3Q6RI45 1802 aa29.66■■■□□ 2.34
MCF2L2-209ENST00000475664 PKD1L3Q7Z443 1732 aa29.65■■■□□ 2.34
MCF2L2-209ENST00000475664 HMOX1P09601 288 aa29.64■■■□□ 2.34
MCF2L2-209ENST00000475664 SEPT12Q8IYM1 358 aa29.64■■■□□ 2.34
MCF2L2-209ENST00000475664 RAPGEF4Q8WZA2 1011 aa29.64■■■□□ 2.34
MCF2L2-209ENST00000475664 MRS2Q9HD23 443 aa29.64■■■□□ 2.34
MCF2L2-209ENST00000475664 SHANK3Q9BYB0 1731 aa29.63■■■□□ 2.33
MCF2L2-209ENST00000475664 U2AF1L5P0DN76 240 aaPredicted RBP29.63■■■□□ 2.33
MCF2L2-209ENST00000475664 U2AF1Q01081 240 aaKnown RBP eCLIP29.63■■■□□ 2.33
MCF2L2-209ENST00000475664 PLEKHG2Q9H7P9 1386 aa29.63■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms