RNA–Protein interactions for RNA: ENST00000475657.1

FAM3A-218, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 585 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-218ENST00000475657 AATKQ6ZMQ8 1374 aa20.5■□□□□ 0.87
FAM3A-218ENST00000475657 BRD4O60885 1362 aaPredicted RBP20.49■□□□□ 0.87
FAM3A-218ENST00000475657 CHD4Q14839 1912 aa20.49■□□□□ 0.87
FAM3A-218ENST00000475657 TXNRD1Q16881 649 aa20.49■□□□□ 0.87
FAM3A-218ENST00000475657 DCAF11Q8TEB1 546 aa20.49■□□□□ 0.87
FAM3A-218ENST00000475657 KDM2AQ9Y2K7 1162 aa20.49■□□□□ 0.87
FAM3A-218ENST00000475657 MAP3K5Q99683 1374 aa20.48■□□□□ 0.87
FAM3A-218ENST00000475657 MARCH10Q8NA82 808 aaPredicted RBP20.48■□□□□ 0.87
FAM3A-218ENST00000475657 TOPAZ1Q8N9V7 1692 aa20.48■□□□□ 0.87
FAM3A-218ENST00000475657 LRRC37A3O60309 1634 aa20.47■□□□□ 0.87
FAM3A-218ENST00000475657 TOM1L2Q6ZVM7 507 aa20.46■□□□□ 0.87
FAM3A-218ENST00000475657 ARHGEF28Q8N1W1 1705 aaKnown RBP20.46■□□□□ 0.87
FAM3A-218ENST00000475657 ARXQ96QS3 562 aa20.44■□□□□ 0.86
FAM3A-218ENST00000475657 WDR17Q8IZU2 1322 aa20.44■□□□□ 0.86
FAM3A-218ENST00000475657 GIGYF1O75420 1035 aaPredicted RBP20.41■□□□□ 0.86
FAM3A-218ENST00000475657 NLRP6P59044 892 aa20.4■□□□□ 0.86
FAM3A-218ENST00000475657 CEP350Q5VT06 3117 aa20.4■□□□□ 0.86
FAM3A-218ENST00000475657 SLIT3O75094 1523 aa20.39■□□□□ 0.85
FAM3A-218ENST00000475657 CARD10Q9BWT7 1032 aa20.39■□□□□ 0.85
FAM3A-218ENST00000475657 PPIP5K1Q6PFW1 1433 aa20.38■□□□□ 0.85
FAM3A-218ENST00000475657 EXOC5O00471 708 aa20.38■□□□□ 0.85
FAM3A-218ENST00000475657 AXIN2Q9Y2T1 843 aa20.38■□□□□ 0.85
FAM3A-218ENST00000475657 ZBTB7CA1YPR0 619 aa20.37■□□□□ 0.85
FAM3A-218ENST00000475657 GPR162Q16538 588 aa20.37■□□□□ 0.85
FAM3A-218ENST00000475657 COL18A1P39060 1754 aa20.36■□□□□ 0.85
FAM3A-218ENST00000475657 USP6P35125 1406 aa20.36■□□□□ 0.85
FAM3A-218ENST00000475657 SRPK2P78362 688 aaKnown RBP20.35■□□□□ 0.85
FAM3A-218ENST00000475657 ARHGEF25Q86VW2 580 aa20.34■□□□□ 0.85
FAM3A-218ENST00000475657 AKAP12Q02952 1782 aa20.34■□□□□ 0.85
FAM3A-218ENST00000475657 WNK3Q9BYP7 1800 aa20.33■□□□□ 0.85
FAM3A-218ENST00000475657 CPSF1Q10570 1443 aaKnown RBP20.33■□□□□ 0.84
FAM3A-218ENST00000475657 KCNH5Q8NCM2 988 aa20.32■□□□□ 0.84
FAM3A-218ENST00000475657 SLC16A10Q8TF71 515 aa20.32■□□□□ 0.84
FAM3A-218ENST00000475657 CCDC7Q96M83 1385 aa20.32■□□□□ 0.84
FAM3A-218ENST00000475657 CSB-PGBD3P0DP91 1061 aa20.3■□□□□ 0.84
FAM3A-218ENST00000475657 CABP2Q9NPB3 220 aa20.3■□□□□ 0.84
FAM3A-218ENST00000475657 CABP1Q9NZU7 370 aa20.3■□□□□ 0.84
FAM3A-218ENST00000475657 PAPPAQ13219 1627 aa20.3■□□□□ 0.84
FAM3A-218ENST00000475657 TNS2Q63HR2 1409 aa20.29■□□□□ 0.84
FAM3A-218ENST00000475657 RAB3GAP2Q9H2M9 1393 aa20.28■□□□□ 0.84
FAM3A-218ENST00000475657 GOLGB1Q14789 3259 aaKnown RBP20.28■□□□□ 0.84
FAM3A-218ENST00000475657 CENPJQ9HC77 1338 aaPredicted RBP20.27■□□□□ 0.84
FAM3A-218ENST00000475657 POLD1P28340 1107 aa20.27■□□□□ 0.84
FAM3A-218ENST00000475657 ZNF827Q17R98 1081 aa20.27■□□□□ 0.84
FAM3A-218ENST00000475657 NHSQ6T4R5 1651 aa20.26■□□□□ 0.83
FAM3A-218ENST00000475657 KIAA1210Q9ULL0 1709 aa20.26■□□□□ 0.83
FAM3A-218ENST00000475657 TRPM1Q7Z4N2 1603 aa20.25■□□□□ 0.83
FAM3A-218ENST00000475657 AKT1S1Q96B36 256 aa20.25■□□□□ 0.83
FAM3A-218ENST00000475657 PIK3C2AO00443 1686 aa20.24■□□□□ 0.83
FAM3A-218ENST00000475657 GRIN3BO60391 1043 aa20.24■□□□□ 0.83
FAM3A-218ENST00000475657 NBPF1Q3BBV0 1214 aa20.24■□□□□ 0.83
FAM3A-218ENST00000475657 ACSBG1Q96GR2 724 aa20.24■□□□□ 0.83
FAM3A-218ENST00000475657 ZNF692Q9BU19 519 aaPredicted RBP20.24■□□□□ 0.83
FAM3A-218ENST00000475657 LRRC4BQ9NT99 713 aa20.24■□□□□ 0.83
FAM3A-218ENST00000475657 SLC27A3Q5K4L6 730 aa20.23■□□□□ 0.83
FAM3A-218ENST00000475657 SHANK3Q9BYB0 1731 aa20.23■□□□□ 0.83
FAM3A-218ENST00000475657 ABCC6O95255 1503 aa20.22■□□□□ 0.83
FAM3A-218ENST00000475657 TTC21BQ7Z4L5 1316 aa20.22■□□□□ 0.83
FAM3A-218ENST00000475657 PELP1Q8IZL8 1130 aaKnown RBP20.21■□□□□ 0.83
FAM3A-218ENST00000475657 TTC21AQ8NDW8 1320 aa20.21■□□□□ 0.83
FAM3A-218ENST00000475657 COL24A1Q17RW2 1714 aa20.2■□□□□ 0.82
FAM3A-218ENST00000475657 KLHL34Q8N239 644 aa20.2■□□□□ 0.82
FAM3A-218ENST00000475657 PNPLA7Q6ZV29 1317 aa20.19■□□□□ 0.82
FAM3A-218ENST00000475657 RGPD5Q99666 1765 aa20.18■□□□□ 0.82
FAM3A-218ENST00000475657 IL2RBP14784 551 aa20.18■□□□□ 0.82
FAM3A-218ENST00000475657 NLGN2Q8NFZ4 835 aa20.18■□□□□ 0.82
FAM3A-218ENST00000475657 QRICH2Q9H0J4 1663 aa20.18■□□□□ 0.82
FAM3A-218ENST00000475657 NFAT5O94916 1531 aa20.17■□□□□ 0.82
FAM3A-218ENST00000475657 QSER1Q2KHR3 1735 aa20.17■□□□□ 0.82
FAM3A-218ENST00000475657 SOX12O15370 315 aa20.17■□□□□ 0.82
FAM3A-218ENST00000475657 BTAF1O14981 1849 aa20.16■□□□□ 0.82
FAM3A-218ENST00000475657 YBX3P16989 372 aaKnown RBP eCLIP20.16■□□□□ 0.82
FAM3A-218ENST00000475657 ERBB3P21860 1342 aa20.16■□□□□ 0.82
FAM3A-218ENST00000475657 EVC2Q86UK5 1308 aa20.16■□□□□ 0.82
FAM3A-218ENST00000475657 HSPA6P17066 643 aa20.15■□□□□ 0.82
FAM3A-218ENST00000475657 NLRP2Q9NX02 1062 aa20.15■□□□□ 0.82
FAM3A-218ENST00000475657 TFCP2L1Q9NZI6 479 aa20.15■□□□□ 0.82
FAM3A-218ENST00000475657 ATP10DQ9P241 1426 aa20.13■□□□□ 0.81
FAM3A-218ENST00000475657 GPBP1L1Q9HC44 474 aaPredicted RBP20.11■□□□□ 0.81
FAM3A-218ENST00000475657 KAT6BQ8WYB5 2073 aa20.11■□□□□ 0.81
FAM3A-218ENST00000475657 USP31Q70CQ4 1352 aa20.1■□□□□ 0.81
FAM3A-218ENST00000475657 ADCY9O60503 1353 aa20.08■□□□□ 0.8
FAM3A-218ENST00000475657 KTN1Q86UP2 1357 aaKnown RBP20.08■□□□□ 0.8
FAM3A-218ENST00000475657 ANKRD24Q8TF21 1146 aa20.07■□□□□ 0.8
FAM3A-218ENST00000475657 CD2APQ9Y5K6 639 aa20.07■□□□□ 0.8
FAM3A-218ENST00000475657 ANKRD36BQ8N2N9 1353 aa20.05■□□□□ 0.8
FAM3A-218ENST00000475657 DDX54Q8TDD1 881 aaKnown RBP20.04■□□□□ 0.8
FAM3A-218ENST00000475657 PRIM1P49642 420 aaKnown RBP20.03■□□□□ 0.8
FAM3A-218ENST00000475657 KCNQ4P56696 695 aa20.03■□□□□ 0.8
FAM3A-218ENST00000475657 COL23A1Q86Y22 540 aaPredicted RBP20.03■□□□□ 0.8
FAM3A-218ENST00000475657 HMGB2P26583 209 aaKnown RBP20.02■□□□□ 0.8
FAM3A-218ENST00000475657 TUBGCP6Q96RT7 1819 aa20.02■□□□□ 0.79
FAM3A-218ENST00000475657 CCNL1Q9UK58 526 aaPredicted RBP20.01■□□□□ 0.79
FAM3A-218ENST00000475657 USP54Q70EL1 1684 aa20■□□□□ 0.79
FAM3A-218ENST00000475657 NSD2O96028 1365 aa20■□□□□ 0.79
FAM3A-218ENST00000475657 SYTL4Q96C24 671 aaPredicted RBP20■□□□□ 0.79
FAM3A-218ENST00000475657 MSH5O43196 834 aa19.99■□□□□ 0.79
FAM3A-218ENST00000475657 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.99■□□□□ 0.79
FAM3A-218ENST00000475657 LY75O60449 1722 aa19.99■□□□□ 0.79
FAM3A-218ENST00000475657 NME9Q86XW9 330 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms