RNA–Protein interactions for RNA: ENST00000475551.5

CCM2-207, Transcript of CCM2 scaffold protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCM2, Length 2,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-207ENST00000475551 TBC1D9Q6ZT07 1266 aa22■■□□□ 1.11
CCM2-207ENST00000475551 TRAK1Q9UPV9 953 aa22■■□□□ 1.11
CCM2-207ENST00000475551 ANKRD36BQ8N2N9 1353 aa21.99■■□□□ 1.11
CCM2-207ENST00000475551 CEBPAP49715 358 aaPredicted RBP21.99■■□□□ 1.11
CCM2-207ENST00000475551 MED14O60244 1454 aa21.98■■□□□ 1.11
CCM2-207ENST00000475551 RIMS1Q86UR5 1692 aaKnown RBP21.98■■□□□ 1.11
CCM2-207ENST00000475551 ZNF500O60304 480 aaPredicted RBP21.98■■□□□ 1.11
CCM2-207ENST00000475551 NOL7Q9UMY1 257 aaKnown RBP21.98■■□□□ 1.11
CCM2-207ENST00000475551 PREX1Q8TCU6 1659 aa21.98■■□□□ 1.11
CCM2-207ENST00000475551 RBM42Q9BTD8 480 aaKnown RBP21.97■■□□□ 1.11
CCM2-207ENST00000475551 BRPF1P55201 1214 aaPredicted RBP21.97■■□□□ 1.11
CCM2-207ENST00000475551 ANKRD45Q5TZF3 282 aa21.97■■□□□ 1.11
CCM2-207ENST00000475551 C14orf93Q9H972 538 aaKnown RBP21.97■■□□□ 1.11
CCM2-207ENST00000475551 PDLIM2Q96JY6 352 aa21.96■■□□□ 1.11
CCM2-207ENST00000475551 CHMP4BQ9H444 224 aaKnown RBP21.96■■□□□ 1.11
CCM2-207ENST00000475551 ADGRB1O14514 1584 aa21.96■■□□□ 1.11
CCM2-207ENST00000475551 PPIP5K1Q6PFW1 1433 aa21.95■■□□□ 1.11
CCM2-207ENST00000475551 NUCB2P80303 420 aa21.95■■□□□ 1.1
CCM2-207ENST00000475551 ADGRB3O60242 1522 aa21.95■■□□□ 1.1
CCM2-207ENST00000475551 C3P01024 1663 aa21.95■■□□□ 1.1
CCM2-207ENST00000475551 COL3A1P02461 1466 aaPredicted RBP21.94■■□□□ 1.1
CCM2-207ENST00000475551 ZSCAN23Q3MJ62 389 aa21.94■■□□□ 1.1
CCM2-207ENST00000475551 ZNF428Q96B54 188 aa21.94■■□□□ 1.1
CCM2-207ENST00000475551 ZBTB7BO15156 539 aaPredicted RBP21.93■■□□□ 1.1
CCM2-207ENST00000475551 CYP2E1P05181 493 aaPredicted RBP21.93■■□□□ 1.1
CCM2-207ENST00000475551 CDC45O75419 566 aa21.92■■□□□ 1.1
CCM2-207ENST00000475551 RABEP1Q15276 862 aa21.92■■□□□ 1.1
CCM2-207ENST00000475551 U2SURPO15042 1029 aaKnown RBP21.92■■□□□ 1.1
CCM2-207ENST00000475551 LMBRD1Q9NUN5 540 aa21.92■■□□□ 1.1
CCM2-207ENST00000475551 MCTP1Q6DN14 999 aa21.91■■□□□ 1.1
CCM2-207ENST00000475551 R3HCC1Q9Y3T6 440 aaKnown RBP21.91■■□□□ 1.1
CCM2-207ENST00000475551 SPATA31D1Q6ZQQ2 1576 aa21.91■■□□□ 1.1
CCM2-207ENST00000475551 CFAP44Q96MT7 982 aa21.91■■□□□ 1.1
CCM2-207ENST00000475551 EIF2AK3Q9NZJ5 1116 aaKnown RBP21.91■■□□□ 1.1
CCM2-207ENST00000475551 EVC2Q86UK5 1308 aa21.91■■□□□ 1.1
CCM2-207ENST00000475551 CAVIN1Q6NZI2 390 aaKnown RBP21.9■■□□□ 1.1
CCM2-207ENST00000475551 PIK3R4Q99570 1358 aa21.9■■□□□ 1.1
CCM2-207ENST00000475551 RBM10P98175 930 aaKnown RBP21.9■■□□□ 1.1
CCM2-207ENST00000475551 RBSNQ9H1K0 784 aa21.9■■□□□ 1.1
CCM2-207ENST00000475551 MCM5P33992 734 aa21.89■■□□□ 1.1
CCM2-207ENST00000475551 ARHGAP45Q92619 1136 aa21.88■■□□□ 1.09
CCM2-207ENST00000475551 CSPP1Q1MSJ5 1256 aa21.88■■□□□ 1.09
CCM2-207ENST00000475551 IDI1Q13907 227 aa21.87■■□□□ 1.09
CCM2-207ENST00000475551 MTERF4Q7Z6M4 381 aaKnown RBP21.87■■□□□ 1.09
CCM2-207ENST00000475551 CWC22Q9HCG8 908 aaKnown RBP21.87■■□□□ 1.09
CCM2-207ENST00000475551 ZKSCAN5Q9Y2L8 839 aa21.87■■□□□ 1.09
CCM2-207ENST00000475551 TULP4Q9NRJ4 1543 aa21.87■■□□□ 1.09
CCM2-207ENST00000475551 PPLO60437 1756 aa21.87■■□□□ 1.09
CCM2-207ENST00000475551 FAM13BQ9NYF5 915 aa21.86■■□□□ 1.09
CCM2-207ENST00000475551 PIK3C2BO00750 1634 aa21.86■■□□□ 1.09
CCM2-207ENST00000475551 CHGAP10645 457 aaKnown RBP21.86■■□□□ 1.09
CCM2-207ENST00000475551 NCLP19338 710 aaKnown RBP21.86■■□□□ 1.09
CCM2-207ENST00000475551 PRDM4Q9UKN5 801 aa21.86■■□□□ 1.09
CCM2-207ENST00000475551 PTCH1Q13635 1447 aa21.86■■□□□ 1.09
CCM2-207ENST00000475551 TNRQ92752 1358 aa21.85■■□□□ 1.09
CCM2-207ENST00000475551 KDM4FA0A1W2PPD8 638 aa21.85■■□□□ 1.09
CCM2-207ENST00000475551 PRIM1P49642 420 aaKnown RBP21.85■■□□□ 1.09
CCM2-207ENST00000475551 TMEM132EQ6IEE7 984 aa21.85■■□□□ 1.09
CCM2-207ENST00000475551 UQCRHLA0A096LP55 91 aa21.85■■□□□ 1.09
CCM2-207ENST00000475551 UQCRHP07919 91 aa21.85■■□□□ 1.09
CCM2-207ENST00000475551 SIRT2Q8IXJ6 389 aa21.85■■□□□ 1.09
CCM2-207ENST00000475551 DYNC1I1O14576 645 aa21.84■■□□□ 1.09
CCM2-207ENST00000475551 SLC52A1Q9NWF4 448 aa21.84■■□□□ 1.09
CCM2-207ENST00000475551 PTPRMP28827 1452 aa21.84■■□□□ 1.09
CCM2-207ENST00000475551 XPCQ01831 940 aaPredicted RBP21.84■■□□□ 1.09
CCM2-207ENST00000475551 GSPT1P15170 499 aaKnown RBP21.83■■□□□ 1.08
CCM2-207ENST00000475551 MRPL50Q8N5N7 158 aaKnown RBP21.82■■□□□ 1.08
CCM2-207ENST00000475551 C1orf115Q9H7X2 142 aa21.82■■□□□ 1.08
CCM2-207ENST00000475551 RPGRIP1LQ68CZ1 1315 aa21.82■■□□□ 1.08
CCM2-207ENST00000475551 AK9Q5TCS8 1911 aa21.82■■□□□ 1.08
CCM2-207ENST00000475551 USP26Q9BXU7 913 aa21.81■■□□□ 1.08
CCM2-207ENST00000475551 LRSAM1Q6UWE0 723 aa21.81■■□□□ 1.08
CCM2-207ENST00000475551 GPT2Q8TD30 523 aa21.81■■□□□ 1.08
CCM2-207ENST00000475551 CCDC39Q9UFE4 941 aa21.81■■□□□ 1.08
CCM2-207ENST00000475551 A0A1W2PP64 1363 aa21.8■■□□□ 1.08
CCM2-207ENST00000475551 ABCC4O15439 1325 aa21.8■■□□□ 1.08
CCM2-207ENST00000475551 PLEKHM2Q8IWE5 1019 aa21.8■■□□□ 1.08
CCM2-207ENST00000475551 PNPLA6Q8IY17 1366 aa21.79■■□□□ 1.08
CCM2-207ENST00000475551 DIAPH1O60610 1272 aaKnown RBP21.79■■□□□ 1.08
CCM2-207ENST00000475551 VAMP4O75379 141 aa21.79■■□□□ 1.08
CCM2-207ENST00000475551 PRPF40AO75400 957 aaKnown RBP21.79■■□□□ 1.08
CCM2-207ENST00000475551 PKP1Q13835 747 aa21.79■■□□□ 1.08
CCM2-207ENST00000475551 ARHGEF28Q8N1W1 1705 aaKnown RBP21.79■■□□□ 1.08
CCM2-207ENST00000475551 SASS6Q6UVJ0 657 aa21.78■■□□□ 1.08
CCM2-207ENST00000475551 GGNBP2Q9H3C7 697 aa21.78■■□□□ 1.08
CCM2-207ENST00000475551 CABP2Q9NPB3 220 aa21.78■■□□□ 1.08
CCM2-207ENST00000475551 TTC22Q5TAA0 569 aa21.78■■□□□ 1.08
CCM2-207ENST00000475551 SMAP1Q8IYB5 467 aaPredicted RBP21.78■■□□□ 1.08
CCM2-207ENST00000475551 ANKRD26Q9UPS8 1709 aa21.77■■□□□ 1.08
CCM2-207ENST00000475551 FCHSD2O94868 740 aa21.77■■□□□ 1.08
CCM2-207ENST00000475551 INTS3Q68E01 1043 aaKnown RBP21.77■■□□□ 1.07
CCM2-207ENST00000475551 RBM27Q9P2N5 1060 aaKnown RBP21.77■■□□□ 1.07
CCM2-207ENST00000475551 STAG3Q9UJ98 1225 aa21.77■■□□□ 1.07
CCM2-207ENST00000475551 ST18O60284 1047 aa21.76■■□□□ 1.07
CCM2-207ENST00000475551 TMEM131LA2VDJ0 1609 aa21.76■■□□□ 1.07
CCM2-207ENST00000475551 CDC42BPGQ6DT37 1551 aa21.76■■□□□ 1.07
CCM2-207ENST00000475551 MYO5BQ9ULV0 1848 aa21.76■■□□□ 1.07
CCM2-207ENST00000475551 ZDHHC9Q9Y397 364 aa21.75■■□□□ 1.07
CCM2-207ENST00000475551 TMEM63CQ9P1W3 806 aa21.75■■□□□ 1.07
CCM2-207ENST00000475551 DCTPP1Q9H773 170 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms