RNA–Protein interactions for RNA: ENST00000475501.1

LRP8-208, Transcript of LDL receptor related protein 8, humanhuman

TSL 3

Gene LRP8, Length 721 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP8-208ENST00000475501 USP35Q9P2H5 1018 aa12.77□□□□□ -0.37
LRP8-208ENST00000475501 WDR17Q8IZU2 1322 aa12.77□□□□□ -0.37
LRP8-208ENST00000475501 USP31Q70CQ4 1352 aa12.77□□□□□ -0.37
LRP8-208ENST00000475501 KTN1Q86UP2 1357 aaKnown RBP12.77□□□□□ -0.37
LRP8-208ENST00000475501 TRIM37O94972 964 aa12.76□□□□□ -0.37
LRP8-208ENST00000475501 CARD11Q9BXL7 1154 aa12.76□□□□□ -0.37
LRP8-208ENST00000475501 TONSLQ96HA7 1378 aa12.76□□□□□ -0.37
LRP8-208ENST00000475501 NINLQ9Y2I6 1382 aa12.76□□□□□ -0.37
LRP8-208ENST00000475501 OVOS2A0A0G2JMS6 1433 aa12.76□□□□□ -0.37
LRP8-208ENST00000475501 OVOS2A0A0J9YW53 1432 aa12.76□□□□□ -0.37
LRP8-208ENST00000475501 OVOS2Q6IE36 1432 aa12.76□□□□□ -0.37
LRP8-208ENST00000475501 LRRC37A3O60309 1634 aa12.75□□□□□ -0.37
LRP8-208ENST00000475501 NFAT5O94916 1531 aa12.75□□□□□ -0.37
LRP8-208ENST00000475501 APBA3O96018 575 aa12.75□□□□□ -0.37
LRP8-208ENST00000475501 FAM182BQ5T319 152 aa12.75□□□□□ -0.37
LRP8-208ENST00000475501 NUP188Q5SRE5 1749 aa12.74□□□□□ -0.37
LRP8-208ENST00000475501 CCDC7Q96M83 1385 aa12.74□□□□□ -0.37
LRP8-208ENST00000475501 PLSCR1O15162 318 aa12.74□□□□□ -0.37
LRP8-208ENST00000475501 TOM1L2Q6ZVM7 507 aa12.74□□□□□ -0.37
LRP8-208ENST00000475501 CARD10Q9BWT7 1032 aa12.74□□□□□ -0.37
LRP8-208ENST00000475501 EZH2Q15910 746 aaKnown RBP12.73□□□□□ -0.37
LRP8-208ENST00000475501 DDB1Q16531 1140 aa12.73□□□□□ -0.37
LRP8-208ENST00000475501 NBPF14Q5TI25 921 aa12.73□□□□□ -0.37
LRP8-208ENST00000475501 EDC4Q6P2E9 1401 aaKnown RBP12.72□□□□□ -0.37
LRP8-208ENST00000475501 LTN1O94822 1766 aa12.72□□□□□ -0.37
LRP8-208ENST00000475501 HDGFL2Q7Z4V5 671 aaPredicted RBP12.72□□□□□ -0.37
LRP8-208ENST00000475501 TERF2IPQ9NYB0 399 aa12.72□□□□□ -0.37
LRP8-208ENST00000475501 AXIN2Q9Y2T1 843 aa12.72□□□□□ -0.37
LRP8-208ENST00000475501 CD163L1Q9NR16 1453 aa12.72□□□□□ -0.37
LRP8-208ENST00000475501 FAM208AQ9UK61 1670 aaKnown RBP12.7□□□□□ -0.38
LRP8-208ENST00000475501 PSDA5PKW4 1024 aaPredicted RBP12.7□□□□□ -0.38
LRP8-208ENST00000475501 R3HDM1Q15032 1099 aaKnown RBP12.7□□□□□ -0.38
LRP8-208ENST00000475501 BCL11BQ9C0K0 894 aaPredicted RBP12.7□□□□□ -0.38
LRP8-208ENST00000475501 EXOC5O00471 708 aa12.68□□□□□ -0.38
LRP8-208ENST00000475501 CSB-PGBD3P0DP91 1061 aa12.68□□□□□ -0.38
LRP8-208ENST00000475501 ERBB3P21860 1342 aa12.67□□□□□ -0.38
LRP8-208ENST00000475501 ZBTB7CA1YPR0 619 aa12.67□□□□□ -0.38
LRP8-208ENST00000475501 TRIM26Q12899 539 aaPredicted RBP12.67□□□□□ -0.38
LRP8-208ENST00000475501 KAT6BQ8WYB5 2073 aa12.66□□□□□ -0.38
LRP8-208ENST00000475501 TNS2Q63HR2 1409 aa12.66□□□□□ -0.38
LRP8-208ENST00000475501 TMC1Q8TDI8 760 aa12.66□□□□□ -0.38
LRP8-208ENST00000475501 TESK2Q96S53 571 aa12.66□□□□□ -0.38
LRP8-208ENST00000475501 SLC12A5Q9H2X9 1139 aa12.66□□□□□ -0.38
LRP8-208ENST00000475501 TIMELESSQ9UNS1 1208 aa12.66□□□□□ -0.38
LRP8-208ENST00000475501 A0A1W2PP64 1363 aa12.66□□□□□ -0.38
LRP8-208ENST00000475501 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.65□□□□□ -0.38
LRP8-208ENST00000475501 MARCH10Q8NA82 808 aaPredicted RBP12.65□□□□□ -0.38
LRP8-208ENST00000475501 NHSQ6T4R5 1651 aa12.64□□□□□ -0.39
LRP8-208ENST00000475501 NME9Q86XW9 330 aa12.64□□□□□ -0.39
LRP8-208ENST00000475501 ST20-MTHFSA0A0A6YYL1 179 aa12.63□□□□□ -0.39
LRP8-208ENST00000475501 CDCA8Q53HL2 280 aa12.63□□□□□ -0.39
LRP8-208ENST00000475501 CLSPNQ9HAW4 1339 aa12.62□□□□□ -0.39
LRP8-208ENST00000475501 ANKRD36BQ8N2N9 1353 aa12.62□□□□□ -0.39
LRP8-208ENST00000475501 SOX12O15370 315 aa12.62□□□□□ -0.39
LRP8-208ENST00000475501 IL2RBP14784 551 aa12.62□□□□□ -0.39
LRP8-208ENST00000475501 IP6K1Q92551 441 aa12.62□□□□□ -0.39
LRP8-208ENST00000475501 SPON1Q9HCB6 807 aa12.62□□□□□ -0.39
LRP8-208ENST00000475501 CASZ1Q86V15 1759 aa12.61□□□□□ -0.39
LRP8-208ENST00000475501 KCNQ2O43526 872 aa12.61□□□□□ -0.39
LRP8-208ENST00000475501 TMF1P82094 1093 aa12.61□□□□□ -0.39
LRP8-208ENST00000475501 ANKRD24Q8TF21 1146 aa12.61□□□□□ -0.39
LRP8-208ENST00000475501 RTL1A6NKG5 1358 aa12.6□□□□□ -0.39
LRP8-208ENST00000475501 COG3Q96JB2 828 aa12.6□□□□□ -0.39
LRP8-208ENST00000475501 NLRP2Q9NX02 1062 aa12.6□□□□□ -0.39
LRP8-208ENST00000475501 KIF24Q5T7B8 1368 aa12.59□□□□□ -0.39
LRP8-208ENST00000475501 BTAF1O14981 1849 aa12.59□□□□□ -0.39
LRP8-208ENST00000475501 HMGB2P26583 209 aaKnown RBP12.58□□□□□ -0.4
LRP8-208ENST00000475501 TXNRD1Q16881 649 aa12.58□□□□□ -0.4
LRP8-208ENST00000475501 PROM2Q8N271 834 aa12.58□□□□□ -0.4
LRP8-208ENST00000475501 CGNL1Q0VF96 1302 aa12.58□□□□□ -0.4
LRP8-208ENST00000475501 USP47Q96K76 1375 aa12.57□□□□□ -0.4
LRP8-208ENST00000475501 QSER1Q2KHR3 1735 aa12.57□□□□□ -0.4
LRP8-208ENST00000475501 KIF20BQ96Q89 1820 aa12.57□□□□□ -0.4
LRP8-208ENST00000475501 STK32BQ9NY57 414 aa12.56□□□□□ -0.4
LRP8-208ENST00000475501 MAP3K19Q56UN5 1328 aa12.56□□□□□ -0.4
LRP8-208ENST00000475501 DCAF8L1A6NGE4 600 aa12.55□□□□□ -0.4
LRP8-208ENST00000475501 HOXC9P31274 260 aa12.55□□□□□ -0.4
LRP8-208ENST00000475501 SLC15A2Q16348 729 aa12.55□□□□□ -0.4
LRP8-208ENST00000475501 PTF1AQ7RTS3 328 aa12.55□□□□□ -0.4
LRP8-208ENST00000475501 PPP1R1BQ9UD71 204 aaPredicted RBP12.55□□□□□ -0.4
LRP8-208ENST00000475501 PAPPAQ13219 1627 aa12.55□□□□□ -0.4
LRP8-208ENST00000475501 RGPD2P0DJD1 1756 aa12.54□□□□□ -0.4
LRP8-208ENST00000475501 FYB1O15117 783 aa12.54□□□□□ -0.4
LRP8-208ENST00000475501 AMPHP49418 695 aa12.54□□□□□ -0.4
LRP8-208ENST00000475501 SLC27A3Q5K4L6 730 aa12.54□□□□□ -0.4
LRP8-208ENST00000475501 ANO8Q9HCE9 1232 aaPredicted RBP12.54□□□□□ -0.4
LRP8-208ENST00000475501 SMG6Q86US8 1419 aaKnown RBP12.54□□□□□ -0.4
LRP8-208ENST00000475501 SHANK3Q9BYB0 1731 aa12.53□□□□□ -0.4
LRP8-208ENST00000475501 LY75O60449 1722 aa12.52□□□□□ -0.41
LRP8-208ENST00000475501 MTFR1LQ9H019 292 aa12.52□□□□□ -0.41
LRP8-208ENST00000475501 INSRP06213 1382 aa12.52□□□□□ -0.41
LRP8-208ENST00000475501 MYOM1P52179 1685 aa12.51□□□□□ -0.41
LRP8-208ENST00000475501 COL24A1Q17RW2 1714 aa12.51□□□□□ -0.41
LRP8-208ENST00000475501 ZCRB1Q8TBF4 217 aaKnown RBP12.51□□□□□ -0.41
LRP8-208ENST00000475501 SLC16A10Q8TF71 515 aa12.51□□□□□ -0.41
LRP8-208ENST00000475501 ANKRD26Q9UPS8 1709 aa12.51□□□□□ -0.41
LRP8-208ENST00000475501 FLT4P35916 1363 aa12.5□□□□□ -0.41
LRP8-208ENST00000475501 DOT1LQ8TEK3 1739 aa12.5□□□□□ -0.41
LRP8-208ENST00000475501 MAP2P11137 1827 aaKnown RBP12.5□□□□□ -0.41
LRP8-208ENST00000475501 NSD2O96028 1365 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms