RNA–Protein interactions for RNA: ENST00000475427.2

PDE6C-202, Transcript of phosphodiesterase 6C, humanhuman

TSL 2

Gene PDE6C, Length 476 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-202ENST00000475427 CDV3Q9UKY7 258 aaKnown RBP9.48□□□□□ -0.89
PDE6C-202ENST00000475427 MRPL14Q6P1L8 145 aaKnown RBP9.47□□□□□ -0.89
PDE6C-202ENST00000475427 CCDC116Q8IYX3 515 aa9.47□□□□□ -0.89
PDE6C-202ENST00000475427 ZFP42Q96MM3 310 aa9.47□□□□□ -0.89
PDE6C-202ENST00000475427 KCTD15Q96SI1 283 aaPredicted RBP9.46□□□□□ -0.9
PDE6C-202ENST00000475427 SCARF1Q14162 830 aa9.45□□□□□ -0.9
PDE6C-202ENST00000475427 EMILIN1Q9Y6C2 1016 aa9.45□□□□□ -0.9
PDE6C-202ENST00000475427 PURBQ96QR8 312 aaKnown RBP9.44□□□□□ -0.9
PDE6C-202ENST00000475427 PPP1R26Q5T8A7 1209 aaPredicted RBP9.43□□□□□ -0.9
PDE6C-202ENST00000475427 SNRKQ9NRH2 765 aa9.43□□□□□ -0.9
PDE6C-202ENST00000475427 SOCS7O14512 581 aa9.42□□□□□ -0.9
PDE6C-202ENST00000475427 TREML4Q6UXN2 200 aa9.42□□□□□ -0.9
PDE6C-202ENST00000475427 DZIP3Q86Y13 1208 aaKnown RBP9.42□□□□□ -0.9
PDE6C-202ENST00000475427 MTMR14Q8NCE2 650 aa9.42□□□□□ -0.9
PDE6C-202ENST00000475427 ZBBXA8MT70 800 aa9.41□□□□□ -0.9
PDE6C-202ENST00000475427 NBPF20Q3BBV1 942 aa9.41□□□□□ -0.9
PDE6C-202ENST00000475427 INTS6LQ5JSJ4 861 aaKnown RBP9.41□□□□□ -0.9
PDE6C-202ENST00000475427 MEIOBQ8N635 442 aa9.41□□□□□ -0.9
PDE6C-202ENST00000475427 PGPEP1Q9NXJ5 209 aa9.41□□□□□ -0.9
PDE6C-202ENST00000475427 DHX9Q08211 1270 aaKnown RBP9.4□□□□□ -0.9
PDE6C-202ENST00000475427 C6orf118Q5T5N4 469 aa9.4□□□□□ -0.9
PDE6C-202ENST00000475427 UPP2O95045 317 aa9.39□□□□□ -0.91
PDE6C-202ENST00000475427 FBXO45P0C2W1 286 aa9.39□□□□□ -0.91
PDE6C-202ENST00000475427 LCE2AQ5TA79 106 aaPredicted RBP9.39□□□□□ -0.91
PDE6C-202ENST00000475427 LINC00528Q8N1L1 170 aa9.39□□□□□ -0.91
PDE6C-202ENST00000475427 APBB1O00213 710 aa9.38□□□□□ -0.91
PDE6C-202ENST00000475427 NFX1Q12986 1120 aaKnown RBP9.38□□□□□ -0.91
PDE6C-202ENST00000475427 NDUFB9Q9Y6M9 179 aa9.38□□□□□ -0.91
PDE6C-202ENST00000475427 LOC100996750A0A140TA64 210 aa9.37□□□□□ -0.91
PDE6C-202ENST00000475427 TERTO14746 1132 aaKnown RBP9.37□□□□□ -0.91
PDE6C-202ENST00000475427 WFS1O76024 890 aa9.37□□□□□ -0.91
PDE6C-202ENST00000475427 BMP2P12643 396 aa9.37□□□□□ -0.91
PDE6C-202ENST00000475427 CBLBQ13191 982 aa9.37□□□□□ -0.91
PDE6C-202ENST00000475427 Q6ZVU0 165 aa9.37□□□□□ -0.91
PDE6C-202ENST00000475427 TSEN34Q9BSV6 310 aaKnown RBP9.37□□□□□ -0.91
PDE6C-202ENST00000475427 KRTAP4-6Q9BYQ5 205 aa9.37□□□□□ -0.91
PDE6C-202ENST00000475427 ESPNB1AK53 854 aa9.36□□□□□ -0.91
PDE6C-202ENST00000475427 GPR37L1O60883 481 aa9.36□□□□□ -0.91
PDE6C-202ENST00000475427 RAB15P59190 212 aa9.36□□□□□ -0.91
PDE6C-202ENST00000475427 PCDHB9Q9Y5E1 797 aa9.36□□□□□ -0.91
PDE6C-202ENST00000475427 SOBPA7XYQ1 873 aa9.35□□□□□ -0.91
PDE6C-202ENST00000475427 NR1H3Q13133 447 aa9.35□□□□□ -0.91
PDE6C-202ENST00000475427 TMPRSS4Q9NRS4 437 aa9.35□□□□□ -0.91
PDE6C-202ENST00000475427 NXF1Q9UBU9 619 aaKnown RBP9.35□□□□□ -0.91
PDE6C-202ENST00000475427 ERVH48-1M5A8F1 160 aa9.34□□□□□ -0.91
PDE6C-202ENST00000475427 SEPT12Q8IYM1 358 aa9.34□□□□□ -0.91
PDE6C-202ENST00000475427 SOS2Q07890 1332 aaPredicted RBP9.32□□□□□ -0.92
PDE6C-202ENST00000475427 MAN1A2O60476 641 aa9.32□□□□□ -0.92
PDE6C-202ENST00000475427 GIGYF1O75420 1035 aaPredicted RBP9.32□□□□□ -0.92
PDE6C-202ENST00000475427 ZNF784Q8NCA9 323 aaPredicted RBP9.32□□□□□ -0.92
PDE6C-202ENST00000475427 MCCD1P59942 119 aaPredicted RBP9.31□□□□□ -0.92
PDE6C-202ENST00000475427 NPAS3Q8IXF0 933 aa9.31□□□□□ -0.92
PDE6C-202ENST00000475427 ZNF330Q9Y3S2 320 aaPredicted RBP9.31□□□□□ -0.92
PDE6C-202ENST00000475427 SPINT1O43278 529 aa9.3□□□□□ -0.92
PDE6C-202ENST00000475427 LILRA1O75019 489 aa9.3□□□□□ -0.92
PDE6C-202ENST00000475427 SLC16A10Q8TF71 515 aa9.3□□□□□ -0.92
PDE6C-202ENST00000475427 AGBL1Q96MI9 1066 aa9.3□□□□□ -0.92
PDE6C-202ENST00000475427 PRM3Q9NNZ6 103 aa9.3□□□□□ -0.92
PDE6C-202ENST00000475427 TBC1D2BQ9UPU7 963 aa9.3□□□□□ -0.92
PDE6C-202ENST00000475427 ADD1P35611 737 aaKnown RBP9.29□□□□□ -0.92
PDE6C-202ENST00000475427 VEGFBP49765 207 aa9.29□□□□□ -0.92
PDE6C-202ENST00000475427 LCE2CQ5TA81 110 aa9.29□□□□□ -0.92
PDE6C-202ENST00000475427 ZNF592Q92610 1267 aa9.29□□□□□ -0.92
PDE6C-202ENST00000475427 STK17AQ9UEE5 414 aa9.29□□□□□ -0.92
PDE6C-202ENST00000475427 DNMT3LQ9UJW3 386 aa9.29□□□□□ -0.92
PDE6C-202ENST00000475427 TTLL8A6PVC2 850 aa9.28□□□□□ -0.92
PDE6C-202ENST00000475427 RELBQ01201 579 aa9.28□□□□□ -0.92
PDE6C-202ENST00000475427 ADH1AP07327 375 aa9.27□□□□□ -0.93
PDE6C-202ENST00000475427 RNF20Q5VTR2 975 aa9.27□□□□□ -0.93
PDE6C-202ENST00000475427 CCDC125Q86Z20 511 aa9.27□□□□□ -0.93
PDE6C-202ENST00000475427 TRIM52Q96A61 297 aa9.27□□□□□ -0.93
PDE6C-202ENST00000475427 CYLDQ9NQC7 956 aa9.27□□□□□ -0.93
PDE6C-202ENST00000475427 H3BM21 787 aa9.26□□□□□ -0.93
PDE6C-202ENST00000475427 ZNF395Q9H8N7 513 aaPredicted RBP9.26□□□□□ -0.93
PDE6C-202ENST00000475427 FIGNL2A6NMB9 653 aa9.25□□□□□ -0.93
PDE6C-202ENST00000475427 IRF5Q13568 498 aa9.25□□□□□ -0.93
PDE6C-202ENST00000475427 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.25□□□□□ -0.93
PDE6C-202ENST00000475427 KDF1Q8NAX2 398 aaPredicted RBP9.25□□□□□ -0.93
PDE6C-202ENST00000475427 INSM2Q96T92 566 aaPredicted RBP9.25□□□□□ -0.93
PDE6C-202ENST00000475427 WIPF1O43516 503 aa9.24□□□□□ -0.93
PDE6C-202ENST00000475427 PTGIRP43119 386 aa9.24□□□□□ -0.93
PDE6C-202ENST00000475427 CTSOP43234 321 aaPredicted RBP9.24□□□□□ -0.93
PDE6C-202ENST00000475427 IRF7Q92985 503 aa9.24□□□□□ -0.93
PDE6C-202ENST00000475427 GDPD2Q9HCC8 539 aa9.24□□□□□ -0.93
PDE6C-202ENST00000475427 MCM6Q14566 821 aa9.23□□□□□ -0.93
PDE6C-202ENST00000475427 PPFIA3O75145 1194 aa9.22□□□□□ -0.93
PDE6C-202ENST00000475427 POLMQ9NP87 494 aaPredicted RBP9.22□□□□□ -0.93
PDE6C-202ENST00000475427 CEP126Q9P2H0 1117 aa9.22□□□□□ -0.93
PDE6C-202ENST00000475427 ABL2P42684 1182 aa9.21□□□□□ -0.94
PDE6C-202ENST00000475427 ERVK-9P63128 1117 aa9.21□□□□□ -0.94
PDE6C-202ENST00000475427 EIF4G2P78344 907 aaKnown RBP eCLIP9.21□□□□□ -0.94
PDE6C-202ENST00000475427 CC2D2BQ6DHV5 1058 aa9.21□□□□□ -0.94
PDE6C-202ENST00000475427 PCDHB11Q9Y5F2 797 aa9.21□□□□□ -0.94
PDE6C-202ENST00000475427 ERBB4Q15303 1308 aa9.21□□□□□ -0.94
PDE6C-202ENST00000475427 ATP5J2-PTCD1G3V325 749 aa9.2□□□□□ -0.94
PDE6C-202ENST00000475427 GMPRP36959 345 aa9.2□□□□□ -0.94
PDE6C-202ENST00000475427 PTSQ03393 145 aa9.2□□□□□ -0.94
PDE6C-202ENST00000475427 VAC14Q08AM6 782 aa9.19□□□□□ -0.94
PDE6C-202ENST00000475427 RNF217Q8TC41 542 aa9.19□□□□□ -0.94
PDE6C-202ENST00000475427 SCTRP47872 440 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms