RNA–Protein interactions for RNA: ENST00000475423.1

DKC1-208, Transcript of dyskerin pseudouridine synthase 1, humanhuman

TSL 2

Gene DKC1, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1-208ENST00000475423 CARD11Q9BXL7 1154 aa23.48■■□□□ 1.35
DKC1-208ENST00000475423 LRRC37A3O60309 1634 aa23.48■■□□□ 1.35
DKC1-208ENST00000475423 MON2Q7Z3U7 1717 aa23.47■■□□□ 1.35
DKC1-208ENST00000475423 DDB1Q16531 1140 aa23.47■■□□□ 1.35
DKC1-208ENST00000475423 OVOS2A0A0G2JMS6 1433 aa23.47■■□□□ 1.35
DKC1-208ENST00000475423 OVOS2A0A0J9YW53 1432 aa23.47■■□□□ 1.35
DKC1-208ENST00000475423 OVOS2Q6IE36 1432 aa23.47■■□□□ 1.35
DKC1-208ENST00000475423 NFAT5O94916 1531 aa23.47■■□□□ 1.35
DKC1-208ENST00000475423 NUP188Q5SRE5 1749 aa23.47■■□□□ 1.35
DKC1-208ENST00000475423 RGPD5Q99666 1765 aa23.47■■□□□ 1.35
DKC1-208ENST00000475423 CDCA7Q9BWT1 371 aaPredicted RBP23.46■■□□□ 1.35
DKC1-208ENST00000475423 CARD10Q9BWT7 1032 aa23.45■■□□□ 1.34
DKC1-208ENST00000475423 SBF2Q86WG5 1849 aa23.45■■□□□ 1.34
DKC1-208ENST00000475423 WNK3Q9BYP7 1800 aa23.45■■□□□ 1.34
DKC1-208ENST00000475423 CD163L1Q9NR16 1453 aa23.44■■□□□ 1.34
DKC1-208ENST00000475423 USP31Q70CQ4 1352 aa23.44■■□□□ 1.34
DKC1-208ENST00000475423 SOX12O15370 315 aa23.44■■□□□ 1.34
DKC1-208ENST00000475423 NBPF14Q5TI25 921 aa23.42■■□□□ 1.34
DKC1-208ENST00000475423 ABCC6O95255 1503 aa23.42■■□□□ 1.34
DKC1-208ENST00000475423 BCL9O00512 1426 aa23.42■■□□□ 1.34
DKC1-208ENST00000475423 USP54Q70EL1 1684 aa23.41■■□□□ 1.34
DKC1-208ENST00000475423 PLSCR1O15162 318 aa23.41■■□□□ 1.34
DKC1-208ENST00000475423 MARCH10Q8NA82 808 aaPredicted RBP23.41■■□□□ 1.34
DKC1-208ENST00000475423 TONSLQ96HA7 1378 aa23.4■■□□□ 1.34
DKC1-208ENST00000475423 CSB-PGBD3P0DP91 1061 aa23.4■■□□□ 1.34
DKC1-208ENST00000475423 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.4■■□□□ 1.34
DKC1-208ENST00000475423 PUS7Q96PZ0 661 aaKnown RBP23.4■■□□□ 1.34
DKC1-208ENST00000475423 BCL11BQ9C0K0 894 aaPredicted RBP23.4■■□□□ 1.34
DKC1-208ENST00000475423 RGPD3A6NKT7 1758 aaPredicted RBP23.4■■□□□ 1.34
DKC1-208ENST00000475423 RGPD4Q7Z3J3 1758 aa23.4■■□□□ 1.34
DKC1-208ENST00000475423 SLC12A5Q9H2X9 1139 aa23.39■■□□□ 1.33
DKC1-208ENST00000475423 NME9Q86XW9 330 aa23.38■■□□□ 1.33
DKC1-208ENST00000475423 TMC1Q8TDI8 760 aa23.38■■□□□ 1.33
DKC1-208ENST00000475423 CCDC7Q96M83 1385 aa23.38■■□□□ 1.33
DKC1-208ENST00000475423 PTF1AQ7RTS3 328 aa23.37■■□□□ 1.33
DKC1-208ENST00000475423 HDGFL2Q7Z4V5 671 aaPredicted RBP23.37■■□□□ 1.33
DKC1-208ENST00000475423 EDC4Q6P2E9 1401 aaKnown RBP23.35■■□□□ 1.33
DKC1-208ENST00000475423 EXOC5O00471 708 aa23.35■■□□□ 1.33
DKC1-208ENST00000475423 TERF2IPQ9NYB0 399 aa23.34■■□□□ 1.33
DKC1-208ENST00000475423 ERBB3P21860 1342 aa23.33■■□□□ 1.32
DKC1-208ENST00000475423 A0A1W2PP64 1363 aa23.32■■□□□ 1.32
DKC1-208ENST00000475423 PROM2Q8N271 834 aa23.32■■□□□ 1.32
DKC1-208ENST00000475423 TESK2Q96S53 571 aa23.32■■□□□ 1.32
DKC1-208ENST00000475423 LTN1O94822 1766 aa23.32■■□□□ 1.32
DKC1-208ENST00000475423 TNS2Q63HR2 1409 aa23.3■■□□□ 1.32
DKC1-208ENST00000475423 ST20-MTHFSA0A0A6YYL1 179 aa23.28■■□□□ 1.32
DKC1-208ENST00000475423 SLC24A1O60721 1099 aa23.28■■□□□ 1.32
DKC1-208ENST00000475423 SPON1Q9HCB6 807 aa23.28■■□□□ 1.32
DKC1-208ENST00000475423 NLRP2Q9NX02 1062 aa23.28■■□□□ 1.32
DKC1-208ENST00000475423 NINLQ9Y2I6 1382 aa23.27■■□□□ 1.32
DKC1-208ENST00000475423 KCNQ2O43526 872 aa23.27■■□□□ 1.32
DKC1-208ENST00000475423 ANO8Q9HCE9 1232 aaPredicted RBP23.27■■□□□ 1.32
DKC1-208ENST00000475423 ANKRD24Q8TF21 1146 aa23.26■■□□□ 1.31
DKC1-208ENST00000475423 IL2RBP14784 551 aa23.25■■□□□ 1.31
DKC1-208ENST00000475423 TXNRD1Q16881 649 aa23.24■■□□□ 1.31
DKC1-208ENST00000475423 IP6K1Q92551 441 aa23.24■■□□□ 1.31
DKC1-208ENST00000475423 CASZ1Q86V15 1759 aa23.22■■□□□ 1.31
DKC1-208ENST00000475423 NHSQ6T4R5 1651 aa23.22■■□□□ 1.31
DKC1-208ENST00000475423 TRIM26Q12899 539 aaPredicted RBP23.2■■□□□ 1.3
DKC1-208ENST00000475423 PDGFDQ9GZP0 370 aaPredicted RBP23.2■■□□□ 1.3
DKC1-208ENST00000475423 PPP1R1BQ9UD71 204 aaPredicted RBP23.19■■□□□ 1.3
DKC1-208ENST00000475423 ACSBG1Q96GR2 724 aa23.18■■□□□ 1.3
DKC1-208ENST00000475423 COG3Q96JB2 828 aa23.18■■□□□ 1.3
DKC1-208ENST00000475423 ANKRD36BQ8N2N9 1353 aa23.17■■□□□ 1.3
DKC1-208ENST00000475423 FAM208AQ9UK61 1670 aaKnown RBP23.16■■□□□ 1.3
DKC1-208ENST00000475423 MAP3K19Q56UN5 1328 aa23.16■■□□□ 1.3
DKC1-208ENST00000475423 SLC15A2Q16348 729 aa23.16■■□□□ 1.3
DKC1-208ENST00000475423 STK32BQ9NY57 414 aa23.16■■□□□ 1.3
DKC1-208ENST00000475423 HOXC9P31274 260 aa23.14■■□□□ 1.29
DKC1-208ENST00000475423 LTV1Q96GA3 475 aaPredicted RBP23.14■■□□□ 1.29
DKC1-208ENST00000475423 KAT6BQ8WYB5 2073 aa23.13■■□□□ 1.29
DKC1-208ENST00000475423 BTAF1O14981 1849 aa23.13■■□□□ 1.29
DKC1-208ENST00000475423 FBLN1P23142 703 aa23.13■■□□□ 1.29
DKC1-208ENST00000475423 TMF1P82094 1093 aa23.13■■□□□ 1.29
DKC1-208ENST00000475423 USP47Q96K76 1375 aa23.13■■□□□ 1.29
DKC1-208ENST00000475423 ZBTB7AO95365 584 aa23.12■■□□□ 1.29
DKC1-208ENST00000475423 PTGER2P43116 358 aa23.12■■□□□ 1.29
DKC1-208ENST00000475423 FYB1O15117 783 aa23.11■■□□□ 1.29
DKC1-208ENST00000475423 AMPHP49418 695 aa23.1■■□□□ 1.29
DKC1-208ENST00000475423 PAPPAQ13219 1627 aa23.1■■□□□ 1.29
DKC1-208ENST00000475423 DDX54Q8TDD1 881 aaKnown RBP23.09■■□□□ 1.29
DKC1-208ENST00000475423 ATF5Q9Y2D1 282 aaPredicted RBP23.08■■□□□ 1.29
DKC1-208ENST00000475423 RGPD2P0DJD1 1756 aa23.08■■□□□ 1.29
DKC1-208ENST00000475423 RTL1A6NKG5 1358 aa23.07■■□□□ 1.28
DKC1-208ENST00000475423 MTFR1LQ9H019 292 aa23.07■■□□□ 1.28
DKC1-208ENST00000475423 GGNBP2Q9H3C7 697 aa23.07■■□□□ 1.28
DKC1-208ENST00000475423 LRRC4BQ9NT99 713 aa23.07■■□□□ 1.28
DKC1-208ENST00000475423 MYOM1P52179 1685 aa23.06■■□□□ 1.28
DKC1-208ENST00000475423 RRS1Q15050 365 aaKnown RBP23.05■■□□□ 1.28
DKC1-208ENST00000475423 CDCA8Q53HL2 280 aa23.05■■□□□ 1.28
DKC1-208ENST00000475423 SGIP1Q9BQI5 828 aa23.05■■□□□ 1.28
DKC1-208ENST00000475423 DCAF8L1A6NGE4 600 aa23.04■■□□□ 1.28
DKC1-208ENST00000475423 ZCRB1Q8TBF4 217 aaKnown RBP23.04■■□□□ 1.28
DKC1-208ENST00000475423 SHANK3Q9BYB0 1731 aa23.03■■□□□ 1.28
DKC1-208ENST00000475423 NBPF6Q5VWK0 638 aa23.03■■□□□ 1.28
DKC1-208ENST00000475423 NBPF4Q96M43 638 aa23.03■■□□□ 1.28
DKC1-208ENST00000475423 TIMELESSQ9UNS1 1208 aa23.03■■□□□ 1.28
DKC1-208ENST00000475423 MEGF6O75095 1541 aa23.03■■□□□ 1.28
DKC1-208ENST00000475423 YY1P25490 414 aa23.02■■□□□ 1.28
DKC1-208ENST00000475423 PRIM1P49642 420 aaKnown RBP23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms