RNA–Protein interactions for RNA: ENST00000475378.5

RNF220-212, Transcript of ring finger protein 220, humanhuman

TSL 3

Gene RNF220, Length 916 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-212ENST00000475378 CHD4Q14839 1912 aa26.24■■□□□ 1.79
RNF220-212ENST00000475378 RGPD5Q99666 1765 aa26.23■■□□□ 1.79
RNF220-212ENST00000475378 PTGER2P43116 358 aa26.23■■□□□ 1.79
RNF220-212ENST00000475378 PIK3C2AO00443 1686 aa26.22■■□□□ 1.79
RNF220-212ENST00000475378 USP6P35125 1406 aa26.21■■□□□ 1.79
RNF220-212ENST00000475378 ZBTB7AO95365 584 aa26.2■■□□□ 1.78
RNF220-212ENST00000475378 MARCH10Q8NA82 808 aaPredicted RBP26.2■■□□□ 1.78
RNF220-212ENST00000475378 ZNF784Q8NCA9 323 aaPredicted RBP26.19■■□□□ 1.78
RNF220-212ENST00000475378 ZBTB7CA1YPR0 619 aa26.18■■□□□ 1.78
RNF220-212ENST00000475378 SRPK2P78362 688 aaKnown RBP26.18■■□□□ 1.78
RNF220-212ENST00000475378 TOM1L2Q6ZVM7 507 aa26.18■■□□□ 1.78
RNF220-212ENST00000475378 CABP2Q9NPB3 220 aa26.18■■□□□ 1.78
RNF220-212ENST00000475378 QRICH2Q9H0J4 1663 aa26.18■■□□□ 1.78
RNF220-212ENST00000475378 NBPF1Q3BBV0 1214 aa26.17■■□□□ 1.78
RNF220-212ENST00000475378 AXIN2Q9Y2T1 843 aa26.17■■□□□ 1.78
RNF220-212ENST00000475378 WDR17Q8IZU2 1322 aa26.16■■□□□ 1.78
RNF220-212ENST00000475378 NLRP6P59044 892 aa26.16■■□□□ 1.78
RNF220-212ENST00000475378 ATF5Q9Y2D1 282 aaPredicted RBP26.15■■□□□ 1.78
RNF220-212ENST00000475378 CDCA7Q9BWT1 371 aaPredicted RBP26.14■■□□□ 1.78
RNF220-212ENST00000475378 CPSF1Q10570 1443 aaKnown RBP26.14■■□□□ 1.77
RNF220-212ENST00000475378 TXNRD1Q16881 649 aa26.13■■□□□ 1.77
RNF220-212ENST00000475378 CENPJQ9HC77 1338 aaPredicted RBP26.13■■□□□ 1.77
RNF220-212ENST00000475378 SGIP1Q9BQI5 828 aa26.12■■□□□ 1.77
RNF220-212ENST00000475378 SYT17Q9BSW7 474 aa26.12■■□□□ 1.77
RNF220-212ENST00000475378 CABP1Q9NZU7 370 aa26.12■■□□□ 1.77
RNF220-212ENST00000475378 SLC15A2Q16348 729 aa26.11■■□□□ 1.77
RNF220-212ENST00000475378 FHDC1Q9C0D6 1143 aaPredicted RBP26.11■■□□□ 1.77
RNF220-212ENST00000475378 STK32BQ9NY57 414 aa26.11■■□□□ 1.77
RNF220-212ENST00000475378 NHSQ6T4R5 1651 aa26.1■■□□□ 1.77
RNF220-212ENST00000475378 ARHGEF25Q86VW2 580 aa26.09■■□□□ 1.77
RNF220-212ENST00000475378 TRPM1Q7Z4N2 1603 aa26.09■■□□□ 1.77
RNF220-212ENST00000475378 PAPPAQ13219 1627 aa26.08■■□□□ 1.77
RNF220-212ENST00000475378 CARD10Q9BWT7 1032 aa26.08■■□□□ 1.77
RNF220-212ENST00000475378 MTFR1LQ9H019 292 aa26.08■■□□□ 1.77
RNF220-212ENST00000475378 TNS2Q63HR2 1409 aa26.05■■□□□ 1.76
RNF220-212ENST00000475378 NFAT5O94916 1531 aa26.04■■□□□ 1.76
RNF220-212ENST00000475378 EXOC5O00471 708 aa26.03■■□□□ 1.76
RNF220-212ENST00000475378 KCNH5Q8NCM2 988 aa26.02■■□□□ 1.76
RNF220-212ENST00000475378 MAP3K5Q99683 1374 aa26.02■■□□□ 1.76
RNF220-212ENST00000475378 ABCC6O95255 1503 aa26.02■■□□□ 1.76
RNF220-212ENST00000475378 BTAF1O14981 1849 aa26.02■■□□□ 1.76
RNF220-212ENST00000475378 TTC21BQ7Z4L5 1316 aa26.01■■□□□ 1.75
RNF220-212ENST00000475378 CCDC7Q96M83 1385 aa26.01■■□□□ 1.75
RNF220-212ENST00000475378 CSB-PGBD3P0DP91 1061 aa26■■□□□ 1.75
RNF220-212ENST00000475378 KAT6BQ8WYB5 2073 aa26■■□□□ 1.75
RNF220-212ENST00000475378 SENP3-EIF4A1A0A087X0R7 540 aa25.99■■□□□ 1.75
RNF220-212ENST00000475378 C1QTNF8P60827 252 aa25.99■■□□□ 1.75
RNF220-212ENST00000475378 ARXQ96QS3 562 aa25.98■■□□□ 1.75
RNF220-212ENST00000475378 COL24A1Q17RW2 1714 aa25.97■■□□□ 1.75
RNF220-212ENST00000475378 QSER1Q2KHR3 1735 aa25.97■■□□□ 1.75
RNF220-212ENST00000475378 GOLGB1Q14789 3259 aaKnown RBP25.96■■□□□ 1.75
RNF220-212ENST00000475378 ZNF692Q9BU19 519 aaPredicted RBP25.96■■□□□ 1.75
RNF220-212ENST00000475378 EVC2Q86UK5 1308 aa25.95■■□□□ 1.75
RNF220-212ENST00000475378 TTC21AQ8NDW8 1320 aa25.95■■□□□ 1.75
RNF220-212ENST00000475378 SOX12O15370 315 aa25.95■■□□□ 1.74
RNF220-212ENST00000475378 MON2Q7Z3U7 1717 aa25.94■■□□□ 1.74
RNF220-212ENST00000475378 USP54Q70EL1 1684 aa25.94■■□□□ 1.74
RNF220-212ENST00000475378 ACSBG1Q96GR2 724 aa25.94■■□□□ 1.74
RNF220-212ENST00000475378 LTN1O94822 1766 aa25.92■■□□□ 1.74
RNF220-212ENST00000475378 ZNF827Q17R98 1081 aa25.92■■□□□ 1.74
RNF220-212ENST00000475378 TUBGCP6Q96RT7 1819 aa25.9■■□□□ 1.74
RNF220-212ENST00000475378 LRRC4BQ9NT99 713 aa25.89■■□□□ 1.74
RNF220-212ENST00000475378 ERBB3P21860 1342 aa25.88■■□□□ 1.73
RNF220-212ENST00000475378 KTN1Q86UP2 1357 aaKnown RBP25.85■■□□□ 1.73
RNF220-212ENST00000475378 AKT1S1Q96B36 256 aa25.85■■□□□ 1.73
RNF220-212ENST00000475378 SHANK3Q9BYB0 1731 aa25.85■■□□□ 1.73
RNF220-212ENST00000475378 CEP350Q5VT06 3117 aa25.85■■□□□ 1.73
RNF220-212ENST00000475378 USP31Q70CQ4 1352 aa25.84■■□□□ 1.73
RNF220-212ENST00000475378 IL2RBP14784 551 aa25.84■■□□□ 1.73
RNF220-212ENST00000475378 GPR162Q16538 588 aa25.84■■□□□ 1.73
RNF220-212ENST00000475378 NLRP2Q9NX02 1062 aa25.83■■□□□ 1.73
RNF220-212ENST00000475378 SLC16A10Q8TF71 515 aa25.82■■□□□ 1.72
RNF220-212ENST00000475378 GIGYF1O75420 1035 aaPredicted RBP25.79■■□□□ 1.72
RNF220-212ENST00000475378 L3MBTL2Q969R5 705 aa25.79■■□□□ 1.72
RNF220-212ENST00000475378 PNPLA7Q6ZV29 1317 aa25.79■■□□□ 1.72
RNF220-212ENST00000475378 LY75O60449 1722 aa25.79■■□□□ 1.72
RNF220-212ENST00000475378 CD163L1Q9NR16 1453 aa25.79■■□□□ 1.72
RNF220-212ENST00000475378 SLC27A3Q5K4L6 730 aa25.78■■□□□ 1.72
RNF220-212ENST00000475378 IFFO2Q5TF58 517 aa25.77■■□□□ 1.72
RNF220-212ENST00000475378 ANKRD24Q8TF21 1146 aa25.77■■□□□ 1.72
RNF220-212ENST00000475378 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.76■■□□□ 1.71
RNF220-212ENST00000475378 SBNO2Q9Y2G9 1366 aa25.76■■□□□ 1.71
RNF220-212ENST00000475378 FAM208AQ9UK61 1670 aaKnown RBP25.76■■□□□ 1.71
RNF220-212ENST00000475378 POLD1P28340 1107 aa25.75■■□□□ 1.71
RNF220-212ENST00000475378 NME9Q86XW9 330 aa25.75■■□□□ 1.71
RNF220-212ENST00000475378 KLHL34Q8N239 644 aa25.75■■□□□ 1.71
RNF220-212ENST00000475378 DOT1LQ8TEK3 1739 aa25.74■■□□□ 1.71
RNF220-212ENST00000475378 ROCK2O75116 1388 aaKnown RBP25.74■■□□□ 1.71
RNF220-212ENST00000475378 NLGN2Q8NFZ4 835 aa25.74■■□□□ 1.71
RNF220-212ENST00000475378 PELP1Q8IZL8 1130 aaKnown RBP25.71■■□□□ 1.71
RNF220-212ENST00000475378 KCNQ4P56696 695 aa25.69■■□□□ 1.7
RNF220-212ENST00000475378 TFCP2L1Q9NZI6 479 aa25.69■■□□□ 1.7
RNF220-212ENST00000475378 NSD2O96028 1365 aa25.69■■□□□ 1.7
RNF220-212ENST00000475378 YBX3P16989 372 aaKnown RBP eCLIP25.68■■□□□ 1.7
RNF220-212ENST00000475378 DDX54Q8TDD1 881 aaKnown RBP25.68■■□□□ 1.7
RNF220-212ENST00000475378 RGPD2P0DJD1 1756 aa25.68■■□□□ 1.7
RNF220-212ENST00000475378 ANKRD36BQ8N2N9 1353 aa25.67■■□□□ 1.7
RNF220-212ENST00000475378 EDC4Q6P2E9 1401 aaKnown RBP25.66■■□□□ 1.7
RNF220-212ENST00000475378 PRIM1P49642 420 aaKnown RBP25.64■■□□□ 1.7
RNF220-212ENST00000475378 IP6K1Q92551 441 aa25.64■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms