RNA–Protein interactions for RNA: ENST00000475375.1

VPS36-203, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-203ENST00000475375 ANO8Q9HCE9 1232 aaPredicted RBP29.45■■■□□ 2.31
VPS36-203ENST00000475375 AXIN2Q9Y2T1 843 aa29.45■■■□□ 2.31
VPS36-203ENST00000475375 PTF1AQ7RTS3 328 aa29.44■■■□□ 2.3
VPS36-203ENST00000475375 CDCA7Q9BWT1 371 aaPredicted RBP29.43■■■□□ 2.3
VPS36-203ENST00000475375 PIK3C2AO00443 1686 aa29.43■■■□□ 2.3
VPS36-203ENST00000475375 MARCH10Q8NA82 808 aaPredicted RBP29.42■■■□□ 2.3
VPS36-203ENST00000475375 CPSF1Q10570 1443 aaKnown RBP29.42■■■□□ 2.3
VPS36-203ENST00000475375 RGPD3A6NKT7 1758 aaPredicted RBP29.41■■■□□ 2.3
VPS36-203ENST00000475375 RGPD4Q7Z3J3 1758 aa29.41■■■□□ 2.3
VPS36-203ENST00000475375 SBF2Q86WG5 1849 aa29.41■■■□□ 2.3
VPS36-203ENST00000475375 KCNH5Q8NCM2 988 aa29.4■■■□□ 2.3
VPS36-203ENST00000475375 COL18A1P39060 1754 aa29.39■■■□□ 2.3
VPS36-203ENST00000475375 ARHGEF25Q86VW2 580 aa29.39■■■□□ 2.3
VPS36-203ENST00000475375 TTC21BQ7Z4L5 1316 aa29.39■■■□□ 2.3
VPS36-203ENST00000475375 ZNF692Q9BU19 519 aaPredicted RBP29.38■■■□□ 2.29
VPS36-203ENST00000475375 ZBTB7AO95365 584 aa29.37■■■□□ 2.29
VPS36-203ENST00000475375 L3MBTL2Q969R5 705 aa29.37■■■□□ 2.29
VPS36-203ENST00000475375 CARD10Q9BWT7 1032 aa29.37■■■□□ 2.29
VPS36-203ENST00000475375 WNK3Q9BYP7 1800 aa29.36■■■□□ 2.29
VPS36-203ENST00000475375 PDGFDQ9GZP0 370 aaPredicted RBP29.36■■■□□ 2.29
VPS36-203ENST00000475375 EXOC5O00471 708 aa29.35■■■□□ 2.29
VPS36-203ENST00000475375 PROM2Q8N271 834 aa29.35■■■□□ 2.29
VPS36-203ENST00000475375 AKAP12Q02952 1782 aa29.34■■■□□ 2.29
VPS36-203ENST00000475375 STK32BQ9NY57 414 aa29.34■■■□□ 2.29
VPS36-203ENST00000475375 TRPM1Q7Z4N2 1603 aa29.34■■■□□ 2.29
VPS36-203ENST00000475375 TTC21AQ8NDW8 1320 aa29.33■■■□□ 2.29
VPS36-203ENST00000475375 BCL9O00512 1426 aa29.33■■■□□ 2.29
VPS36-203ENST00000475375 ROCK2O75116 1388 aaKnown RBP29.32■■■□□ 2.28
VPS36-203ENST00000475375 TXNRD1Q16881 649 aa29.32■■■□□ 2.28
VPS36-203ENST00000475375 CASZ1Q86V15 1759 aa29.31■■■□□ 2.28
VPS36-203ENST00000475375 ATF5Q9Y2D1 282 aaPredicted RBP29.31■■■□□ 2.28
VPS36-203ENST00000475375 RGPD5Q99666 1765 aa29.31■■■□□ 2.28
VPS36-203ENST00000475375 KTN1Q86UP2 1357 aaKnown RBP29.29■■■□□ 2.28
VPS36-203ENST00000475375 CCDC7Q96M83 1385 aa29.29■■■□□ 2.28
VPS36-203ENST00000475375 SLC15A2Q16348 729 aa29.26■■■□□ 2.27
VPS36-203ENST00000475375 NFAT5O94916 1531 aa29.25■■■□□ 2.27
VPS36-203ENST00000475375 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.25■■■□□ 2.27
VPS36-203ENST00000475375 TNS2Q63HR2 1409 aa29.25■■■□□ 2.27
VPS36-203ENST00000475375 PTGER2P43116 358 aa29.24■■■□□ 2.27
VPS36-203ENST00000475375 NEUROD1Q13562 356 aa29.24■■■□□ 2.27
VPS36-203ENST00000475375 SIN3AQ96ST3 1273 aa29.24■■■□□ 2.27
VPS36-203ENST00000475375 MYOM1P52179 1685 aa29.24■■■□□ 2.27
VPS36-203ENST00000475375 ACSBG1Q96GR2 724 aa29.23■■■□□ 2.27
VPS36-203ENST00000475375 NLRP2Q9NX02 1062 aa29.23■■■□□ 2.27
VPS36-203ENST00000475375 ABCC6O95255 1503 aa29.2■■■□□ 2.26
VPS36-203ENST00000475375 FHDC1Q9C0D6 1143 aaPredicted RBP29.19■■■□□ 2.26
VPS36-203ENST00000475375 MTFR1LQ9H019 292 aa29.19■■■□□ 2.26
VPS36-203ENST00000475375 NME9Q86XW9 330 aa29.17■■■□□ 2.26
VPS36-203ENST00000475375 SYT17Q9BSW7 474 aa29.17■■■□□ 2.26
VPS36-203ENST00000475375 ERBB3P21860 1342 aa29.17■■■□□ 2.26
VPS36-203ENST00000475375 UTRNP46939 3433 aa29.16■■■□□ 2.26
VPS36-203ENST00000475375 NHSQ6T4R5 1651 aa29.15■■■□□ 2.26
VPS36-203ENST00000475375 IL2RBP14784 551 aa29.15■■■□□ 2.26
VPS36-203ENST00000475375 TMC1Q8TDI8 760 aa29.15■■■□□ 2.26
VPS36-203ENST00000475375 MON2Q7Z3U7 1717 aa29.14■■■□□ 2.25
VPS36-203ENST00000475375 USP31Q70CQ4 1352 aa29.13■■■□□ 2.25
VPS36-203ENST00000475375 ANKRD24Q8TF21 1146 aa29.13■■■□□ 2.25
VPS36-203ENST00000475375 HDGFL2Q7Z4V5 671 aaPredicted RBP29.12■■■□□ 2.25
VPS36-203ENST00000475375 ZNF784Q8NCA9 323 aaPredicted RBP29.1■■■□□ 2.25
VPS36-203ENST00000475375 ARXQ96QS3 562 aa29.1■■■□□ 2.25
VPS36-203ENST00000475375 SBNO2Q9Y2G9 1366 aa29.09■■■□□ 2.25
VPS36-203ENST00000475375 SGIP1Q9BQI5 828 aa29.08■■■□□ 2.25
VPS36-203ENST00000475375 CARD11Q9BXL7 1154 aa29.08■■■□□ 2.25
VPS36-203ENST00000475375 LTN1O94822 1766 aa29.07■■■□□ 2.24
VPS36-203ENST00000475375 KAT6BQ8WYB5 2073 aa29.06■■■□□ 2.24
VPS36-203ENST00000475375 CD163L1Q9NR16 1453 aa29.05■■■□□ 2.24
VPS36-203ENST00000475375 ZNF827Q17R98 1081 aa29.05■■■□□ 2.24
VPS36-203ENST00000475375 SLC12A5Q9H2X9 1139 aa29.05■■■□□ 2.24
VPS36-203ENST00000475375 BTAF1O14981 1849 aa29.05■■■□□ 2.24
VPS36-203ENST00000475375 USP54Q70EL1 1684 aa29.04■■■□□ 2.24
VPS36-203ENST00000475375 DDX54Q8TDD1 881 aaKnown RBP29.03■■■□□ 2.24
VPS36-203ENST00000475375 TERF2IPQ9NYB0 399 aa29.03■■■□□ 2.24
VPS36-203ENST00000475375 EDC4Q6P2E9 1401 aaKnown RBP29.03■■■□□ 2.24
VPS36-203ENST00000475375 PAPPAQ13219 1627 aa29.02■■■□□ 2.24
VPS36-203ENST00000475375 LTV1Q96GA3 475 aaPredicted RBP29.02■■■□□ 2.24
VPS36-203ENST00000475375 LRRC4BQ9NT99 713 aa29.02■■■□□ 2.24
VPS36-203ENST00000475375 KLHL34Q8N239 644 aa29.01■■■□□ 2.23
VPS36-203ENST00000475375 GPR162Q16538 588 aa28.98■■■□□ 2.23
VPS36-203ENST00000475375 SYTL4Q96C24 671 aaPredicted RBP28.98■■■□□ 2.23
VPS36-203ENST00000475375 A0A1W2PP64 1363 aa28.98■■■□□ 2.23
VPS36-203ENST00000475375 IP6K1Q92551 441 aa28.97■■■□□ 2.23
VPS36-203ENST00000475375 MAP3K5Q99683 1374 aa28.97■■■□□ 2.23
VPS36-203ENST00000475375 SLC27A3Q5K4L6 730 aa28.96■■■□□ 2.23
VPS36-203ENST00000475375 POLD1P28340 1107 aa28.95■■■□□ 2.22
VPS36-203ENST00000475375 AKT1S1Q96B36 256 aa28.95■■■□□ 2.22
VPS36-203ENST00000475375 TFCP2L1Q9NZI6 479 aa28.94■■■□□ 2.22
VPS36-203ENST00000475375 CHD4Q14839 1912 aa28.94■■■□□ 2.22
VPS36-203ENST00000475375 PELP1Q8IZL8 1130 aaKnown RBP28.93■■■□□ 2.22
VPS36-203ENST00000475375 SLC16A10Q8TF71 515 aa28.93■■■□□ 2.22
VPS36-203ENST00000475375 KCNQ4P56696 695 aa28.92■■■□□ 2.22
VPS36-203ENST00000475375 PRIM1P49642 420 aaKnown RBP28.91■■■□□ 2.22
VPS36-203ENST00000475375 SENP3-EIF4A1A0A087X0R7 540 aa28.9■■■□□ 2.22
VPS36-203ENST00000475375 COG3Q96JB2 828 aa28.9■■■□□ 2.22
VPS36-203ENST00000475375 PNPLA7Q6ZV29 1317 aa28.9■■■□□ 2.22
VPS36-203ENST00000475375 AMPHP49418 695 aa28.89■■■□□ 2.22
VPS36-203ENST00000475375 FAM208AQ9UK61 1670 aaKnown RBP28.88■■■□□ 2.21
VPS36-203ENST00000475375 GOLGB1Q14789 3259 aaKnown RBP28.88■■■□□ 2.21
VPS36-203ENST00000475375 PUS7Q96PZ0 661 aaKnown RBP28.87■■■□□ 2.21
VPS36-203ENST00000475375 MAP3K19Q56UN5 1328 aa28.87■■■□□ 2.21
VPS36-203ENST00000475375 ANKRD36BQ8N2N9 1353 aa28.87■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms