RNA–Protein interactions for RNA: ENST00000475307.1

GPM6B-208, Transcript of glycoprotein M6B, humanhuman

TSL 3

Gene GPM6B, Length 678 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPM6B-208ENST00000475307 USP31Q70CQ4 1352 aa16.07■□□□□ 0.16
GPM6B-208ENST00000475307 NINLQ9Y2I6 1382 aa16.07■□□□□ 0.16
GPM6B-208ENST00000475307 CRB1P82279 1406 aa16.07■□□□□ 0.16
GPM6B-208ENST00000475307 EDC4Q6P2E9 1401 aaKnown RBP16.07■□□□□ 0.16
GPM6B-208ENST00000475307 CSB-PGBD3P0DP91 1061 aa16.06■□□□□ 0.16
GPM6B-208ENST00000475307 BAG6P46379 1132 aa16.06■□□□□ 0.16
GPM6B-208ENST00000475307 FAM196AQ6ZSG2 479 aa16.05■□□□□ 0.16
GPM6B-208ENST00000475307 WDR17Q8IZU2 1322 aa16.04■□□□□ 0.16
GPM6B-208ENST00000475307 CDCA8Q53HL2 280 aa16.03■□□□□ 0.16
GPM6B-208ENST00000475307 NFAT5O94916 1531 aa16.03■□□□□ 0.16
GPM6B-208ENST00000475307 COL18A1P39060 1754 aa16.02■□□□□ 0.15
GPM6B-208ENST00000475307 TRIM37O94972 964 aa16.01■□□□□ 0.15
GPM6B-208ENST00000475307 ANKRD36BQ8N2N9 1353 aa16■□□□□ 0.15
GPM6B-208ENST00000475307 EN1Q05925 392 aaPredicted RBP16■□□□□ 0.15
GPM6B-208ENST00000475307 DDB1Q16531 1140 aa16■□□□□ 0.15
GPM6B-208ENST00000475307 COG3Q96JB2 828 aa16■□□□□ 0.15
GPM6B-208ENST00000475307 CDCA7Q9BWT1 371 aaPredicted RBP15.99■□□□□ 0.15
GPM6B-208ENST00000475307 CARD10Q9BWT7 1032 aa15.99■□□□□ 0.15
GPM6B-208ENST00000475307 OVOS2A0A0J9YW53 1432 aa15.99■□□□□ 0.15
GPM6B-208ENST00000475307 OVOS2Q6IE36 1432 aa15.99■□□□□ 0.15
GPM6B-208ENST00000475307 USP54Q70EL1 1684 aa15.99■□□□□ 0.15
GPM6B-208ENST00000475307 ABCC6O95255 1503 aa15.98■□□□□ 0.15
GPM6B-208ENST00000475307 RGPD1P0DJD0 1748 aa15.97■□□□□ 0.15
GPM6B-208ENST00000475307 APBA3O96018 575 aa15.96■□□□□ 0.15
GPM6B-208ENST00000475307 NLRP2Q9NX02 1062 aa15.96■□□□□ 0.15
GPM6B-208ENST00000475307 CCDC7Q96M83 1385 aa15.96■□□□□ 0.15
GPM6B-208ENST00000475307 PARP4Q9UKK3 1724 aaKnown RBP15.96■□□□□ 0.15
GPM6B-208ENST00000475307 ERBB3P21860 1342 aa15.95■□□□□ 0.14
GPM6B-208ENST00000475307 C11orf95C9JLR9 678 aaPredicted RBP15.95■□□□□ 0.14
GPM6B-208ENST00000475307 ANKRD24Q8TF21 1146 aa15.95■□□□□ 0.14
GPM6B-208ENST00000475307 EP400Q96L91 3159 aa15.94■□□□□ 0.14
GPM6B-208ENST00000475307 EIF4G2P78344 907 aaKnown RBP eCLIP15.94■□□□□ 0.14
GPM6B-208ENST00000475307 EZH2Q15910 746 aaKnown RBP15.94■□□□□ 0.14
GPM6B-208ENST00000475307 IP6K1Q92551 441 aa15.94■□□□□ 0.14
GPM6B-208ENST00000475307 POLR3GLQ9BT43 218 aa15.94■□□□□ 0.14
GPM6B-208ENST00000475307 GGNBP2Q9H3C7 697 aa15.94■□□□□ 0.14
GPM6B-208ENST00000475307 RGPD5Q99666 1765 aa15.94■□□□□ 0.14
GPM6B-208ENST00000475307 OVOS2A0A0G2JMS6 1433 aa15.94■□□□□ 0.14
GPM6B-208ENST00000475307 DISP2A7MBM2 1401 aa15.94■□□□□ 0.14
GPM6B-208ENST00000475307 EXOC5O00471 708 aa15.93■□□□□ 0.14
GPM6B-208ENST00000475307 FYB1O15117 783 aa15.93■□□□□ 0.14
GPM6B-208ENST00000475307 AMPHP49418 695 aa15.93■□□□□ 0.14
GPM6B-208ENST00000475307 LTV1Q96GA3 475 aaPredicted RBP15.93■□□□□ 0.14
GPM6B-208ENST00000475307 TNS1Q9HBL0 1735 aaKnown RBP15.92■□□□□ 0.14
GPM6B-208ENST00000475307 FBLN1P23142 703 aa15.92■□□□□ 0.14
GPM6B-208ENST00000475307 CAMKK2Q96RR4 588 aa15.92■□□□□ 0.14
GPM6B-208ENST00000475307 LRRC37A3O60309 1634 aa15.92■□□□□ 0.14
GPM6B-208ENST00000475307 LTN1O94822 1766 aa15.92■□□□□ 0.14
GPM6B-208ENST00000475307 MAP3K19Q56UN5 1328 aa15.92■□□□□ 0.14
GPM6B-208ENST00000475307 PSDA5PKW4 1024 aaPredicted RBP15.91■□□□□ 0.14
GPM6B-208ENST00000475307 MARCH10Q8NA82 808 aaPredicted RBP15.91■□□□□ 0.14
GPM6B-208ENST00000475307 HSPA5P11021 654 aaKnown RBP15.9■□□□□ 0.14
GPM6B-208ENST00000475307 IL2RBP14784 551 aa15.9■□□□□ 0.14
GPM6B-208ENST00000475307 PARD3Q8TEW0 1356 aa15.89■□□□□ 0.13
GPM6B-208ENST00000475307 HOXC9P31274 260 aa15.89■□□□□ 0.13
GPM6B-208ENST00000475307 CARD14Q9BXL6 1004 aa15.89■□□□□ 0.13
GPM6B-208ENST00000475307 WNK3Q9BYP7 1800 aa15.89■□□□□ 0.13
GPM6B-208ENST00000475307 NSD3Q9BZ95 1437 aa15.88■□□□□ 0.13
GPM6B-208ENST00000475307 RRS1Q15050 365 aaKnown RBP15.88■□□□□ 0.13
GPM6B-208ENST00000475307 R3HDM1Q15032 1099 aaKnown RBP15.87■□□□□ 0.13
GPM6B-208ENST00000475307 BCL11BQ9C0K0 894 aaPredicted RBP15.87■□□□□ 0.13
GPM6B-208ENST00000475307 TNS2Q63HR2 1409 aa15.86■□□□□ 0.13
GPM6B-208ENST00000475307 PEAK1Q9H792 1746 aa15.86■□□□□ 0.13
GPM6B-208ENST00000475307 RTL1A6NKG5 1358 aa15.86■□□□□ 0.13
GPM6B-208ENST00000475307 MYOM1P52179 1685 aa15.86■□□□□ 0.13
GPM6B-208ENST00000475307 BCL9O00512 1426 aa15.85■□□□□ 0.13
GPM6B-208ENST00000475307 NBPF14Q5TI25 921 aa15.84■□□□□ 0.13
GPM6B-208ENST00000475307 PTF1AQ7RTS3 328 aa15.84■□□□□ 0.13
GPM6B-208ENST00000475307 CGNL1Q0VF96 1302 aa15.84■□□□□ 0.13
GPM6B-208ENST00000475307 PLSCR1O15162 318 aa15.83■□□□□ 0.12
GPM6B-208ENST00000475307 KIF20BQ96Q89 1820 aa15.82■□□□□ 0.12
GPM6B-208ENST00000475307 HSP90AB2PQ58FF8 381 aa15.82■□□□□ 0.12
GPM6B-208ENST00000475307 SMG6Q86US8 1419 aaKnown RBP15.82■□□□□ 0.12
GPM6B-208ENST00000475307 FLT4P35916 1363 aa15.81■□□□□ 0.12
GPM6B-208ENST00000475307 DDX54Q8TDD1 881 aaKnown RBP15.81■□□□□ 0.12
GPM6B-208ENST00000475307 ACSBG1Q96GR2 724 aa15.81■□□□□ 0.12
GPM6B-208ENST00000475307 FAM208AQ9UK61 1670 aaKnown RBP15.81■□□□□ 0.12
GPM6B-208ENST00000475307 INSRP06213 1382 aa15.8■□□□□ 0.12
GPM6B-208ENST00000475307 KIF24Q5T7B8 1368 aa15.8■□□□□ 0.12
GPM6B-208ENST00000475307 PPM1GO15355 546 aaPredicted RBP15.8■□□□□ 0.12
GPM6B-208ENST00000475307 KCNQ2O43526 872 aa15.8■□□□□ 0.12
GPM6B-208ENST00000475307 NBPF6Q5VWK0 638 aa15.8■□□□□ 0.12
GPM6B-208ENST00000475307 NBPF4Q96M43 638 aa15.8■□□□□ 0.12
GPM6B-208ENST00000475307 PANK3Q9H999 370 aa15.8■□□□□ 0.12
GPM6B-208ENST00000475307 EMILIN1Q9Y6C2 1016 aa15.8■□□□□ 0.12
GPM6B-208ENST00000475307 RREB1Q92766 1687 aa15.79■□□□□ 0.12
GPM6B-208ENST00000475307 USHBP1Q8N6Y0 703 aa15.79■□□□□ 0.12
GPM6B-208ENST00000475307 SBF2Q86WG5 1849 aa15.78■□□□□ 0.12
GPM6B-208ENST00000475307 ZCRB1Q8TBF4 217 aaKnown RBP15.78■□□□□ 0.12
GPM6B-208ENST00000475307 NUP188Q5SRE5 1749 aa15.77■□□□□ 0.12
GPM6B-208ENST00000475307 RAPGEF4Q8WZA2 1011 aa15.77■□□□□ 0.12
GPM6B-208ENST00000475307 TNNT2P45379 298 aaPredicted RBP15.76■□□□□ 0.11
GPM6B-208ENST00000475307 TXNRD1Q16881 649 aa15.76■□□□□ 0.11
GPM6B-208ENST00000475307 PROM2Q8N271 834 aa15.76■□□□□ 0.11
GPM6B-208ENST00000475307 MEGF6O75095 1541 aa15.75■□□□□ 0.11
GPM6B-208ENST00000475307 TATP17735 454 aaPredicted RBP15.75■□□□□ 0.11
GPM6B-208ENST00000475307 NHSQ6T4R5 1651 aa15.74■□□□□ 0.11
GPM6B-208ENST00000475307 POLKQ9UBT6 870 aa15.74■□□□□ 0.11
GPM6B-208ENST00000475307 RGPD3A6NKT7 1758 aaPredicted RBP15.74■□□□□ 0.11
GPM6B-208ENST00000475307 RGPD4Q7Z3J3 1758 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms