RNA–Protein interactions for RNA: ENST00000474911.5

RTN1-205, Transcript of reticulon 1, humanhuman

TSL 2

Gene RTN1, Length 1,412 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-205ENST00000474911 EP400Q96L91 3159 aa18.35■□□□□ 0.53
RTN1-205ENST00000474911 ANKRD36BQ8N2N9 1353 aa18.35■□□□□ 0.53
RTN1-205ENST00000474911 PER1O15534 1290 aaPredicted RBP18.35■□□□□ 0.53
RTN1-205ENST00000474911 EVA1CP58658 441 aa18.35■□□□□ 0.53
RTN1-205ENST00000474911 FAM98CQ17RN3 349 aaKnown RBP18.35■□□□□ 0.53
RTN1-205ENST00000474911 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.35■□□□□ 0.53
RTN1-205ENST00000474911 STRN4Q9NRL3 753 aa18.35■□□□□ 0.53
RTN1-205ENST00000474911 ABCC6O95255 1503 aa18.34■□□□□ 0.53
RTN1-205ENST00000474911 ARHGEF25Q86VW2 580 aa18.34■□□□□ 0.53
RTN1-205ENST00000474911 KNSTRNQ9Y448 316 aa18.34■□□□□ 0.53
RTN1-205ENST00000474911 RGPD5Q99666 1765 aa18.33■□□□□ 0.52
RTN1-205ENST00000474911 KRT27Q7Z3Y8 459 aa18.32■□□□□ 0.52
RTN1-205ENST00000474911 NME9Q86XW9 330 aa18.32■□□□□ 0.52
RTN1-205ENST00000474911 CCDC125Q86Z20 511 aa18.32■□□□□ 0.52
RTN1-205ENST00000474911 OVOS2A0A0J9YW53 1432 aa18.32■□□□□ 0.52
RTN1-205ENST00000474911 OVOS2Q6IE36 1432 aa18.32■□□□□ 0.52
RTN1-205ENST00000474911 BARGINQ6ZT62 677 aa18.32■□□□□ 0.52
RTN1-205ENST00000474911 PRKRIP1Q9H875 184 aaPredicted RBP18.32■□□□□ 0.52
RTN1-205ENST00000474911 LTN1O94822 1766 aa18.31■□□□□ 0.52
RTN1-205ENST00000474911 A0A0G2JS52 829 aa18.31■□□□□ 0.52
RTN1-205ENST00000474911 MYT1Q01538 1121 aa18.31■□□□□ 0.52
RTN1-205ENST00000474911 LARP1Q6PKG0 1096 aaKnown RBP18.31■□□□□ 0.52
RTN1-205ENST00000474911 ZRANB1Q9UGI0 708 aa18.31■□□□□ 0.52
RTN1-205ENST00000474911 THRAP3Q9Y2W1 955 aaKnown RBP18.31■□□□□ 0.52
RTN1-205ENST00000474911 NPC1L1Q9UHC9 1359 aa18.3■□□□□ 0.52
RTN1-205ENST00000474911 CRB1P82279 1406 aa18.3■□□□□ 0.52
RTN1-205ENST00000474911 NSD3Q9BZ95 1437 aa18.29■□□□□ 0.52
RTN1-205ENST00000474911 ZBTB7CA1YPR0 619 aa18.29■□□□□ 0.52
RTN1-205ENST00000474911 TCP11L2Q8N4U5 519 aa18.29■□□□□ 0.52
RTN1-205ENST00000474911 CARD14Q9BXL6 1004 aa18.29■□□□□ 0.52
RTN1-205ENST00000474911 AXIN2Q9Y2T1 843 aa18.28■□□□□ 0.52
RTN1-205ENST00000474911 BLMP54132 1417 aaPredicted RBP18.28■□□□□ 0.52
RTN1-205ENST00000474911 PARP4Q9UKK3 1724 aaKnown RBP18.27■□□□□ 0.52
RTN1-205ENST00000474911 CCER2I3L3R5 266 aa18.27■□□□□ 0.52
RTN1-205ENST00000474911 SOX12O15370 315 aa18.27■□□□□ 0.52
RTN1-205ENST00000474911 RALBP1Q15311 655 aa18.27■□□□□ 0.52
RTN1-205ENST00000474911 AMER1Q5JTC6 1135 aaPredicted RBP18.27■□□□□ 0.52
RTN1-205ENST00000474911 USP35Q9P2H5 1018 aa18.27■□□□□ 0.52
RTN1-205ENST00000474911 WDR17Q8IZU2 1322 aa18.26■□□□□ 0.51
RTN1-205ENST00000474911 PARD3Q8TEW0 1356 aa18.26■□□□□ 0.51
RTN1-205ENST00000474911 WNK3Q9BYP7 1800 aa18.26■□□□□ 0.51
RTN1-205ENST00000474911 CGNL1Q0VF96 1302 aa18.25■□□□□ 0.51
RTN1-205ENST00000474911 KIF20BQ96Q89 1820 aa18.25■□□□□ 0.51
RTN1-205ENST00000474911 CC2D1BQ5T0F9 858 aaKnown RBP18.24■□□□□ 0.51
RTN1-205ENST00000474911 NSD2O96028 1365 aa18.24■□□□□ 0.51
RTN1-205ENST00000474911 CNGB1Q14028 1251 aaPredicted RBP18.23■□□□□ 0.51
RTN1-205ENST00000474911 TOM1L2Q6ZVM7 507 aa18.23■□□□□ 0.51
RTN1-205ENST00000474911 POTEDQ86YR6 584 aa18.23■□□□□ 0.51
RTN1-205ENST00000474911 COG3Q96JB2 828 aa18.23■□□□□ 0.51
RTN1-205ENST00000474911 RGPD1P0DJD0 1748 aa18.23■□□□□ 0.51
RTN1-205ENST00000474911 ANKRD26Q9UPS8 1709 aa18.22■□□□□ 0.51
RTN1-205ENST00000474911 FYB1O15117 783 aa18.22■□□□□ 0.51
RTN1-205ENST00000474911 MYBBP1AQ9BQG0 1328 aaKnown RBP18.21■□□□□ 0.51
RTN1-205ENST00000474911 CARD10Q9BWT7 1032 aa18.21■□□□□ 0.51
RTN1-205ENST00000474911 LRRC37A3O60309 1634 aa18.2■□□□□ 0.5
RTN1-205ENST00000474911 ERBB3P21860 1342 aa18.2■□□□□ 0.5
RTN1-205ENST00000474911 SF3B2Q13435 895 aaKnown RBP18.2■□□□□ 0.5
RTN1-205ENST00000474911 FAM208AQ9UK61 1670 aaKnown RBP18.19■□□□□ 0.5
RTN1-205ENST00000474911 CSB-PGBD3P0DP91 1061 aa18.19■□□□□ 0.5
RTN1-205ENST00000474911 PDE3BQ13370 1112 aa18.19■□□□□ 0.5
RTN1-205ENST00000474911 CDCA7Q9BWT1 371 aaPredicted RBP18.19■□□□□ 0.5
RTN1-205ENST00000474911 FAM196AQ6ZSG2 479 aa18.18■□□□□ 0.5
RTN1-205ENST00000474911 TNS1Q9HBL0 1735 aaKnown RBP18.18■□□□□ 0.5
RTN1-205ENST00000474911 FAM182BQ5T319 152 aa18.17■□□□□ 0.5
RTN1-205ENST00000474911 IP6K1Q92551 441 aa18.17■□□□□ 0.5
RTN1-205ENST00000474911 DISP2A7MBM2 1401 aa18.16■□□□□ 0.5
RTN1-205ENST00000474911 GGNBP2Q9H3C7 697 aa18.16■□□□□ 0.5
RTN1-205ENST00000474911 PEAK1Q9H792 1746 aa18.15■□□□□ 0.5
RTN1-205ENST00000474911 MAP3K19Q56UN5 1328 aa18.15■□□□□ 0.5
RTN1-205ENST00000474911 DDB1Q16531 1140 aa18.15■□□□□ 0.5
RTN1-205ENST00000474911 ANKRD24Q8TF21 1146 aa18.15■□□□□ 0.5
RTN1-205ENST00000474911 RTL1A6NKG5 1358 aa18.14■□□□□ 0.5
RTN1-205ENST00000474911 MORC1Q86VD1 984 aa18.14■□□□□ 0.49
RTN1-205ENST00000474911 SBF2Q86WG5 1849 aa18.13■□□□□ 0.49
RTN1-205ENST00000474911 HOXC9P31274 260 aa18.13■□□□□ 0.49
RTN1-205ENST00000474911 BAG6P46379 1132 aa18.13■□□□□ 0.49
RTN1-205ENST00000474911 DEFB132Q7Z7B7 95 aa18.13■□□□□ 0.49
RTN1-205ENST00000474911 MRS2Q9HD23 443 aa18.13■□□□□ 0.49
RTN1-205ENST00000474911 OVOS2A0A0G2JMS6 1433 aa18.12■□□□□ 0.49
RTN1-205ENST00000474911 KIF24Q5T7B8 1368 aa18.12■□□□□ 0.49
RTN1-205ENST00000474911 FBLN1P23142 703 aa18.11■□□□□ 0.49
RTN1-205ENST00000474911 PPP2R1AP30153 589 aa18.11■□□□□ 0.49
RTN1-205ENST00000474911 AMPHP49418 695 aa18.11■□□□□ 0.49
RTN1-205ENST00000474911 NLRP2Q9NX02 1062 aa18.11■□□□□ 0.49
RTN1-205ENST00000474911 BCL9O00512 1426 aa18.1■□□□□ 0.49
RTN1-205ENST00000474911 TNS2Q63HR2 1409 aa18.09■□□□□ 0.49
RTN1-205ENST00000474911 RGPD2P0DJD1 1756 aa18.09■□□□□ 0.49
RTN1-205ENST00000474911 TRIM37O94972 964 aa18.09■□□□□ 0.49
RTN1-205ENST00000474911 RRS1Q15050 365 aaKnown RBP18.09■□□□□ 0.49
RTN1-205ENST00000474911 CCDC184Q52MB2 194 aa18.09■□□□□ 0.49
RTN1-205ENST00000474911 MAP2P11137 1827 aaKnown RBP18.09■□□□□ 0.49
RTN1-205ENST00000474911 EXOC5O00471 708 aa18.08■□□□□ 0.49
RTN1-205ENST00000474911 IL2RBP14784 551 aa18.08■□□□□ 0.49
RTN1-205ENST00000474911 MARCH10Q8NA82 808 aaPredicted RBP18.06■□□□□ 0.48
RTN1-205ENST00000474911 INSRP06213 1382 aa18.06■□□□□ 0.48
RTN1-205ENST00000474911 FLT4P35916 1363 aa18.06■□□□□ 0.48
RTN1-205ENST00000474911 EN1Q05925 392 aaPredicted RBP18.06■□□□□ 0.48
RTN1-205ENST00000474911 RGPD3A6NKT7 1758 aaPredicted RBP18.05■□□□□ 0.48
RTN1-205ENST00000474911 RGPD4Q7Z3J3 1758 aa18.05■□□□□ 0.48
RTN1-205ENST00000474911 LTV1Q96GA3 475 aaPredicted RBP18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms