RNA–Protein interactions for RNA: ENST00000474896.1

SRRT-209, Transcript of serrate, RNA effector molecule, humanhuman

TSL 3

Gene SRRT, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-209ENST00000474896 COL18A1P39060 1754 aa22.35■■□□□ 1.17
SRRT-209ENST00000474896 CSB-PGBD3P0DP91 1061 aa22.34■■□□□ 1.17
SRRT-209ENST00000474896 PTF1AQ7RTS3 328 aa22.34■■□□□ 1.17
SRRT-209ENST00000474896 MARCH10Q8NA82 808 aaPredicted RBP22.34■■□□□ 1.17
SRRT-209ENST00000474896 BCL11BQ9C0K0 894 aaPredicted RBP22.34■■□□□ 1.17
SRRT-209ENST00000474896 SPON1Q9HCB6 807 aa22.34■■□□□ 1.17
SRRT-209ENST00000474896 TRPM1Q7Z4N2 1603 aa22.34■■□□□ 1.17
SRRT-209ENST00000474896 KCNQ2O43526 872 aa22.33■■□□□ 1.17
SRRT-209ENST00000474896 CDCA7Q9BWT1 371 aaPredicted RBP22.33■■□□□ 1.17
SRRT-209ENST00000474896 PEAK1Q9H792 1746 aa22.33■■□□□ 1.17
SRRT-209ENST00000474896 TTC21AQ8NDW8 1320 aa22.32■■□□□ 1.16
SRRT-209ENST00000474896 CPSF1Q10570 1443 aaKnown RBP22.32■■□□□ 1.16
SRRT-209ENST00000474896 CARD10Q9BWT7 1032 aa22.32■■□□□ 1.16
SRRT-209ENST00000474896 PPP1R1BQ9UD71 204 aaPredicted RBP22.31■■□□□ 1.16
SRRT-209ENST00000474896 SBF2Q86WG5 1849 aa22.31■■□□□ 1.16
SRRT-209ENST00000474896 LRRC37A3O60309 1634 aa22.31■■□□□ 1.16
SRRT-209ENST00000474896 KTN1Q86UP2 1357 aaKnown RBP22.3■■□□□ 1.16
SRRT-209ENST00000474896 EXOC5O00471 708 aa22.29■■□□□ 1.16
SRRT-209ENST00000474896 PROM2Q8N271 834 aa22.29■■□□□ 1.16
SRRT-209ENST00000474896 RGPD5Q99666 1765 aa22.29■■□□□ 1.16
SRRT-209ENST00000474896 AKAP12Q02952 1782 aa22.28■■□□□ 1.16
SRRT-209ENST00000474896 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.27■■□□□ 1.16
SRRT-209ENST00000474896 ANO8Q9HCE9 1232 aaPredicted RBP22.27■■□□□ 1.16
SRRT-209ENST00000474896 BCL9O00512 1426 aa22.24■■□□□ 1.15
SRRT-209ENST00000474896 WNK3Q9BYP7 1800 aa22.23■■□□□ 1.15
SRRT-209ENST00000474896 TRIM26Q12899 539 aaPredicted RBP22.23■■□□□ 1.15
SRRT-209ENST00000474896 TMC1Q8TDI8 760 aa22.23■■□□□ 1.15
SRRT-209ENST00000474896 PDGFDQ9GZP0 370 aaPredicted RBP22.23■■□□□ 1.15
SRRT-209ENST00000474896 RGPD3A6NKT7 1758 aaPredicted RBP22.22■■□□□ 1.15
SRRT-209ENST00000474896 RGPD4Q7Z3J3 1758 aa22.22■■□□□ 1.15
SRRT-209ENST00000474896 NFAT5O94916 1531 aa22.22■■□□□ 1.15
SRRT-209ENST00000474896 YY1P25490 414 aa22.22■■□□□ 1.15
SRRT-209ENST00000474896 NME9Q86XW9 330 aa22.22■■□□□ 1.15
SRRT-209ENST00000474896 CARD11Q9BXL7 1154 aa22.22■■□□□ 1.15
SRRT-209ENST00000474896 CCDC7Q96M83 1385 aa22.22■■□□□ 1.15
SRRT-209ENST00000474896 DCAF8L1A6NGE4 600 aa22.21■■□□□ 1.15
SRRT-209ENST00000474896 TXNRD1Q16881 649 aa22.21■■□□□ 1.15
SRRT-209ENST00000474896 NLRP2Q9NX02 1062 aa22.2■■□□□ 1.14
SRRT-209ENST00000474896 USP31Q70CQ4 1352 aa22.2■■□□□ 1.14
SRRT-209ENST00000474896 ZBTB7AO95365 584 aa22.19■■□□□ 1.14
SRRT-209ENST00000474896 SLC12A5Q9H2X9 1139 aa22.19■■□□□ 1.14
SRRT-209ENST00000474896 STK32BQ9NY57 414 aa22.19■■□□□ 1.14
SRRT-209ENST00000474896 NINLQ9Y2I6 1382 aa22.18■■□□□ 1.14
SRRT-209ENST00000474896 HDGFL2Q7Z4V5 671 aaPredicted RBP22.18■■□□□ 1.14
SRRT-209ENST00000474896 SBNO2Q9Y2G9 1366 aa22.17■■□□□ 1.14
SRRT-209ENST00000474896 ACSBG1Q96GR2 724 aa22.17■■□□□ 1.14
SRRT-209ENST00000474896 ATF5Q9Y2D1 282 aaPredicted RBP22.17■■□□□ 1.14
SRRT-209ENST00000474896 ERBB3P21860 1342 aa22.16■■□□□ 1.14
SRRT-209ENST00000474896 SLC15A2Q16348 729 aa22.16■■□□□ 1.14
SRRT-209ENST00000474896 MON2Q7Z3U7 1717 aa22.16■■□□□ 1.14
SRRT-209ENST00000474896 CD163L1Q9NR16 1453 aa22.15■■□□□ 1.14
SRRT-209ENST00000474896 ABCC6O95255 1503 aa22.15■■□□□ 1.14
SRRT-209ENST00000474896 IL2RBP14784 551 aa22.14■■□□□ 1.13
SRRT-209ENST00000474896 ANKRD24Q8TF21 1146 aa22.14■■□□□ 1.13
SRRT-209ENST00000474896 CASZ1Q86V15 1759 aa22.14■■□□□ 1.13
SRRT-209ENST00000474896 TNS2Q63HR2 1409 aa22.14■■□□□ 1.13
SRRT-209ENST00000474896 PTGER2P43116 358 aa22.13■■□□□ 1.13
SRRT-209ENST00000474896 TERF2IPQ9NYB0 399 aa22.13■■□□□ 1.13
SRRT-209ENST00000474896 KAT6BQ8WYB5 2073 aa22.11■■□□□ 1.13
SRRT-209ENST00000474896 EDC4Q6P2E9 1401 aaKnown RBP22.09■■□□□ 1.13
SRRT-209ENST00000474896 PUS7Q96PZ0 661 aaKnown RBP22.09■■□□□ 1.13
SRRT-209ENST00000474896 LTN1O94822 1766 aa22.09■■□□□ 1.13
SRRT-209ENST00000474896 USP54Q70EL1 1684 aa22.08■■□□□ 1.13
SRRT-209ENST00000474896 IP6K1Q92551 441 aa22.07■■□□□ 1.12
SRRT-209ENST00000474896 LTV1Q96GA3 475 aaPredicted RBP22.07■■□□□ 1.12
SRRT-209ENST00000474896 MTFR1LQ9H019 292 aa22.07■■□□□ 1.12
SRRT-209ENST00000474896 A0A1W2PP64 1363 aa22.07■■□□□ 1.12
SRRT-209ENST00000474896 TONSLQ96HA7 1378 aa22.07■■□□□ 1.12
SRRT-209ENST00000474896 NHSQ6T4R5 1651 aa22.06■■□□□ 1.12
SRRT-209ENST00000474896 DDX54Q8TDD1 881 aaKnown RBP22.05■■□□□ 1.12
SRRT-209ENST00000474896 SYT17Q9BSW7 474 aa22.05■■□□□ 1.12
SRRT-209ENST00000474896 FHDC1Q9C0D6 1143 aaPredicted RBP22.05■■□□□ 1.12
SRRT-209ENST00000474896 MYOM1P52179 1685 aa22.04■■□□□ 1.12
SRRT-209ENST00000474896 SGIP1Q9BQI5 828 aa22.03■■□□□ 1.12
SRRT-209ENST00000474896 LRRC4BQ9NT99 713 aa22.03■■□□□ 1.12
SRRT-209ENST00000474896 ST20-MTHFSA0A0A6YYL1 179 aa22.02■■□□□ 1.12
SRRT-209ENST00000474896 FBLN1P23142 703 aa22.02■■□□□ 1.12
SRRT-209ENST00000474896 COG3Q96JB2 828 aa22.01■■□□□ 1.11
SRRT-209ENST00000474896 TESK2Q96S53 571 aa22.01■■□□□ 1.11
SRRT-209ENST00000474896 BTAF1O14981 1849 aa22.01■■□□□ 1.11
SRRT-209ENST00000474896 ZNF827Q17R98 1081 aa22■■□□□ 1.11
SRRT-209ENST00000474896 AMPHP49418 695 aa21.99■■□□□ 1.11
SRRT-209ENST00000474896 ARXQ96QS3 562 aa21.99■■□□□ 1.11
SRRT-209ENST00000474896 PCGF6Q9BYE7 350 aa21.99■■□□□ 1.11
SRRT-209ENST00000474896 MAP3K19Q56UN5 1328 aa21.99■■□□□ 1.11
SRRT-209ENST00000474896 HOXC9P31274 260 aa21.98■■□□□ 1.11
SRRT-209ENST00000474896 SLC24A1O60721 1099 aa21.97■■□□□ 1.11
SRRT-209ENST00000474896 PRIM1P49642 420 aaKnown RBP21.97■■□□□ 1.11
SRRT-209ENST00000474896 SYTL4Q96C24 671 aaPredicted RBP21.97■■□□□ 1.11
SRRT-209ENST00000474896 SLC27A3Q5K4L6 730 aa21.96■■□□□ 1.11
SRRT-209ENST00000474896 AKT1S1Q96B36 256 aa21.96■■□□□ 1.11
SRRT-209ENST00000474896 PAPPAQ13219 1627 aa21.95■■□□□ 1.1
SRRT-209ENST00000474896 KCNQ4P56696 695 aa21.94■■□□□ 1.1
SRRT-209ENST00000474896 ZCRB1Q8TBF4 217 aaKnown RBP21.94■■□□□ 1.1
SRRT-209ENST00000474896 ZNF784Q8NCA9 323 aaPredicted RBP21.92■■□□□ 1.1
SRRT-209ENST00000474896 SLC16A10Q8TF71 515 aa21.92■■□□□ 1.1
SRRT-209ENST00000474896 TFCP2L1Q9NZI6 479 aa21.92■■□□□ 1.1
SRRT-209ENST00000474896 RRS1Q15050 365 aaKnown RBP21.91■■□□□ 1.1
SRRT-209ENST00000474896 FAM208AQ9UK61 1670 aaKnown RBP21.91■■□□□ 1.1
SRRT-209ENST00000474896 ANKRD36BQ8N2N9 1353 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms