RNA–Protein interactions for RNA: ENST00000474887.5

DNMT3A-211, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 3

Gene DNMT3A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-211ENST00000474887 CDCA8Q53HL2 280 aa19.72■□□□□ 0.75
DNMT3A-211ENST00000474887 CARD10Q9BWT7 1032 aa19.72■□□□□ 0.75
DNMT3A-211ENST00000474887 ABCC6O95255 1503 aa19.71■□□□□ 0.75
DNMT3A-211ENST00000474887 FAM182BQ5T319 152 aa19.71■□□□□ 0.75
DNMT3A-211ENST00000474887 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.71■□□□□ 0.75
DNMT3A-211ENST00000474887 AXIN2Q9Y2T1 843 aa19.71■□□□□ 0.75
DNMT3A-211ENST00000474887 TRIM37O94972 964 aa19.7■□□□□ 0.74
DNMT3A-211ENST00000474887 CD163L1Q9NR16 1453 aa19.7■□□□□ 0.74
DNMT3A-211ENST00000474887 RGPD1P0DJD0 1748 aa19.7■□□□□ 0.74
DNMT3A-211ENST00000474887 TMF1P82094 1093 aa19.69■□□□□ 0.74
DNMT3A-211ENST00000474887 EN1Q05925 392 aaPredicted RBP19.69■□□□□ 0.74
DNMT3A-211ENST00000474887 DDB1Q16531 1140 aa19.69■□□□□ 0.74
DNMT3A-211ENST00000474887 SRCAPQ6ZRS2 3230 aa19.68■□□□□ 0.74
DNMT3A-211ENST00000474887 CSB-PGBD3P0DP91 1061 aa19.68■□□□□ 0.74
DNMT3A-211ENST00000474887 CCDC7Q96M83 1385 aa19.68■□□□□ 0.74
DNMT3A-211ENST00000474887 MON2Q7Z3U7 1717 aa19.68■□□□□ 0.74
DNMT3A-211ENST00000474887 COL18A1P39060 1754 aa19.67■□□□□ 0.74
DNMT3A-211ENST00000474887 APBA3O96018 575 aa19.67■□□□□ 0.74
DNMT3A-211ENST00000474887 NME9Q86XW9 330 aa19.67■□□□□ 0.74
DNMT3A-211ENST00000474887 CAMKK2Q96RR4 588 aa19.67■□□□□ 0.74
DNMT3A-211ENST00000474887 NFAT5O94916 1531 aa19.66■□□□□ 0.74
DNMT3A-211ENST00000474887 A0A1W2PP64 1363 aa19.66■□□□□ 0.74
DNMT3A-211ENST00000474887 SOX12O15370 315 aa19.65■□□□□ 0.74
DNMT3A-211ENST00000474887 BCL9O00512 1426 aa19.65■□□□□ 0.74
DNMT3A-211ENST00000474887 PARP4Q9UKK3 1724 aaKnown RBP19.65■□□□□ 0.74
DNMT3A-211ENST00000474887 USP47Q96K76 1375 aa19.64■□□□□ 0.73
DNMT3A-211ENST00000474887 OVOS2A0A0G2JMS6 1433 aa19.64■□□□□ 0.73
DNMT3A-211ENST00000474887 OVOS2A0A0J9YW53 1432 aa19.64■□□□□ 0.73
DNMT3A-211ENST00000474887 OVOS2Q6IE36 1432 aa19.64■□□□□ 0.73
DNMT3A-211ENST00000474887 USP54Q70EL1 1684 aa19.64■□□□□ 0.73
DNMT3A-211ENST00000474887 EXOC5O00471 708 aa19.63■□□□□ 0.73
DNMT3A-211ENST00000474887 EZH2Q15910 746 aaKnown RBP19.62■□□□□ 0.73
DNMT3A-211ENST00000474887 COG3Q96JB2 828 aa19.62■□□□□ 0.73
DNMT3A-211ENST00000474887 ANKRD36BQ8N2N9 1353 aa19.61■□□□□ 0.73
DNMT3A-211ENST00000474887 ERBB3P21860 1342 aa19.61■□□□□ 0.73
DNMT3A-211ENST00000474887 PLSCR1O15162 318 aa19.61■□□□□ 0.73
DNMT3A-211ENST00000474887 NBPF14Q5TI25 921 aa19.61■□□□□ 0.73
DNMT3A-211ENST00000474887 BCL11BQ9C0K0 894 aaPredicted RBP19.61■□□□□ 0.73
DNMT3A-211ENST00000474887 IP6K1Q92551 441 aa19.6■□□□□ 0.73
DNMT3A-211ENST00000474887 PCGF6Q9BYE7 350 aa19.59■□□□□ 0.73
DNMT3A-211ENST00000474887 TNS1Q9HBL0 1735 aaKnown RBP19.59■□□□□ 0.73
DNMT3A-211ENST00000474887 NLRP2Q9NX02 1062 aa19.58■□□□□ 0.72
DNMT3A-211ENST00000474887 MARCH10Q8NA82 808 aaPredicted RBP19.57■□□□□ 0.72
DNMT3A-211ENST00000474887 ANKRD24Q8TF21 1146 aa19.57■□□□□ 0.72
DNMT3A-211ENST00000474887 IL2RBP14784 551 aa19.56■□□□□ 0.72
DNMT3A-211ENST00000474887 PSDA5PKW4 1024 aaPredicted RBP19.55■□□□□ 0.72
DNMT3A-211ENST00000474887 R3HDM1Q15032 1099 aaKnown RBP19.54■□□□□ 0.72
DNMT3A-211ENST00000474887 FYB1O15117 783 aa19.53■□□□□ 0.72
DNMT3A-211ENST00000474887 LRRC37A3O60309 1634 aa19.53■□□□□ 0.72
DNMT3A-211ENST00000474887 PEAK1Q9H792 1746 aa19.53■□□□□ 0.72
DNMT3A-211ENST00000474887 AMPHP49418 695 aa19.52■□□□□ 0.72
DNMT3A-211ENST00000474887 TNS2Q63HR2 1409 aa19.51■□□□□ 0.71
DNMT3A-211ENST00000474887 RGPD5Q99666 1765 aa19.51■□□□□ 0.71
DNMT3A-211ENST00000474887 LRP5O75197 1615 aa19.51■□□□□ 0.71
DNMT3A-211ENST00000474887 MAP3K19Q56UN5 1328 aa19.51■□□□□ 0.71
DNMT3A-211ENST00000474887 RTL1A6NKG5 1358 aa19.5■□□□□ 0.71
DNMT3A-211ENST00000474887 HOXC9P31274 260 aa19.5■□□□□ 0.71
DNMT3A-211ENST00000474887 KIF24Q5T7B8 1368 aa19.49■□□□□ 0.71
DNMT3A-211ENST00000474887 WNK3Q9BYP7 1800 aa19.48■□□□□ 0.71
DNMT3A-211ENST00000474887 LTN1O94822 1766 aa19.47■□□□□ 0.71
DNMT3A-211ENST00000474887 CCER1Q8TC90 406 aaPredicted RBP19.47■□□□□ 0.71
DNMT3A-211ENST00000474887 RGPD3A6NKT7 1758 aaPredicted RBP19.47■□□□□ 0.71
DNMT3A-211ENST00000474887 RGPD4Q7Z3J3 1758 aa19.47■□□□□ 0.71
DNMT3A-211ENST00000474887 GGNBP2Q9H3C7 697 aa19.46■□□□□ 0.71
DNMT3A-211ENST00000474887 CGNL1Q0VF96 1302 aa19.46■□□□□ 0.71
DNMT3A-211ENST00000474887 EIF4G2P78344 907 aaKnown RBP eCLIP19.45■□□□□ 0.7
DNMT3A-211ENST00000474887 RREB1Q92766 1687 aa19.45■□□□□ 0.7
DNMT3A-211ENST00000474887 SBF2Q86WG5 1849 aa19.44■□□□□ 0.7
DNMT3A-211ENST00000474887 LTV1Q96GA3 475 aaPredicted RBP19.44■□□□□ 0.7
DNMT3A-211ENST00000474887 FAM208AQ9UK61 1670 aaKnown RBP19.43■□□□□ 0.7
DNMT3A-211ENST00000474887 CARD14Q9BXL6 1004 aa19.43■□□□□ 0.7
DNMT3A-211ENST00000474887 SMG6Q86US8 1419 aaKnown RBP19.42■□□□□ 0.7
DNMT3A-211ENST00000474887 TXNRD1Q16881 649 aa19.42■□□□□ 0.7
DNMT3A-211ENST00000474887 PROM2Q8N271 834 aa19.42■□□□□ 0.7
DNMT3A-211ENST00000474887 INSRP06213 1382 aa19.42■□□□□ 0.7
DNMT3A-211ENST00000474887 PTF1AQ7RTS3 328 aa19.41■□□□□ 0.7
DNMT3A-211ENST00000474887 SPON1Q9HCB6 807 aa19.41■□□□□ 0.7
DNMT3A-211ENST00000474887 NUP188Q5SRE5 1749 aa19.4■□□□□ 0.7
DNMT3A-211ENST00000474887 HMGB2P26583 209 aaKnown RBP19.4■□□□□ 0.7
DNMT3A-211ENST00000474887 RRS1Q15050 365 aaKnown RBP19.4■□□□□ 0.7
DNMT3A-211ENST00000474887 ZCRB1Q8TBF4 217 aaKnown RBP19.4■□□□□ 0.7
DNMT3A-211ENST00000474887 FLT4P35916 1363 aa19.4■□□□□ 0.7
DNMT3A-211ENST00000474887 KCNQ2O43526 872 aa19.39■□□□□ 0.69
DNMT3A-211ENST00000474887 STK32BQ9NY57 414 aa19.39■□□□□ 0.69
DNMT3A-211ENST00000474887 FBLN1P23142 703 aa19.38■□□□□ 0.69
DNMT3A-211ENST00000474887 DDX54Q8TDD1 881 aaKnown RBP19.38■□□□□ 0.69
DNMT3A-211ENST00000474887 RAPGEF4Q8WZA2 1011 aa19.38■□□□□ 0.69
DNMT3A-211ENST00000474887 NSD3Q9BZ95 1437 aa19.38■□□□□ 0.69
DNMT3A-211ENST00000474887 NBPF6Q5VWK0 638 aa19.37■□□□□ 0.69
DNMT3A-211ENST00000474887 NBPF4Q96M43 638 aa19.37■□□□□ 0.69
DNMT3A-211ENST00000474887 ACSBG1Q96GR2 724 aa19.36■□□□□ 0.69
DNMT3A-211ENST00000474887 TATP17735 454 aaPredicted RBP19.35■□□□□ 0.69
DNMT3A-211ENST00000474887 SLC15A2Q16348 729 aa19.35■□□□□ 0.69
DNMT3A-211ENST00000474887 HSP90AB2PQ58FF8 381 aa19.35■□□□□ 0.69
DNMT3A-211ENST00000474887 SLC27A3Q5K4L6 730 aa19.35■□□□□ 0.69
DNMT3A-211ENST00000474887 NHSQ6T4R5 1651 aa19.34■□□□□ 0.69
DNMT3A-211ENST00000474887 HSPA5P11021 654 aaKnown RBP19.34■□□□□ 0.69
DNMT3A-211ENST00000474887 WASHC2AQ641Q2 1341 aa19.33■□□□□ 0.69
DNMT3A-211ENST00000474887 ANO8Q9HCE9 1232 aaPredicted RBP19.33■□□□□ 0.68
DNMT3A-211ENST00000474887 PPP1R1BQ9UD71 204 aaPredicted RBP19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms